BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem103p17 (983 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058269.1| Oryza sativa (japonica cultivar-group) Os03g... 745 0.0 dbj|AK060050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 745 0.0 emb|CT830365.1| Oryza sativa (indica cultivar-group) cDNA clone:... 595 e-166 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 228 3e-56 gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom... 228 3e-56 >ref|NM_001058269.1| Oryza sativa (japonica cultivar-group) Os03g0822300 (Os03g0822300) mRNA, complete cds Length = 946 Score = 745 bits (376), Expect = 0.0 Identities = 598/672 (88%) Strand = Plus / Plus Query: 26 catgagcggcgcggcgggcaccgccgacttcttctaccgcgaggcccagcgcctcggcta 85 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 76 catgagcggcgcgggcggcaccgccgacttcttctaccgcgaggcgcagcgcctcggcta 135 Query: 86 cgtcgcccgctccgccttcaagctgatccagatacagaggcagcacaagctcatcacccc 145 ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 136 cgtcgcccgctccgcgttcaagctgatccagatacagaagcagcacaagctcatcgcccc 195 Query: 146 gggcgcggccgtcctcgacctcggctgcgcccccggcgcgtggctccaggtggcttgcca 205 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 196 cggcgccgccgtcctcgacctcggctgcgcccccggcgcgtggctccaggtggcgtgcca 255 Query: 206 gaacctgggtccgctcgagaagggcggcgtggtcgtcggcgttgatgtcaagaaggtgaa 265 ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| Sbjct: 256 gaacctgggtccgctcgagaagggcggggtgatcgtcggcgtcgatgtcaagaaggtgaa 315 Query: 266 ggtcccctcggcgcactgcgactcacgggtcagaacggtctgtgcggacgtgatggctct 325 ||| || || |||||||| ||||| ||||||| || || || || || ||||||||||| Sbjct: 316 ggttccatctgcgcactgtgactcgagggtcaggaccgtttgcgccgatgtgatggctct 375 Query: 326 gatgaagcagcaagtccgggcaatgtcgccgcaggaacgaggattctctgtgatattgtc 385 |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 376 gatgaagcagcaagctcgggcaatgtcgccacaggaacgaggattctctgtaatattgtc 435 Query: 386 cgacatgtgtccagtagtttcagggatcacaaccaaagatgctgctatatcttgtgagtt 445 |||||||| ||||||||||| || || |||||||||||||| ||||||||||| ||| | Sbjct: 436 agacatgtgcccagtagtttctggaattacaaccaaagatgcggctatatcttgcgagct 495 Query: 446 gggcatgcgtgcactctctttggcagttggcaaaataaaaataaaagattcagattatag 505 |||||||||||| || || ||||||||||| || || ||| |||||||||||||| | Sbjct: 496 gggcatgcgtgctctttcattggcagttggtaagatgaaagcaaaagattcagattgcat 555 Query: 506 tgcaagtatagagaagtttcagagctccactgaccctgaccctgacgaggatggtgttct 565 ||||| | ||||||||||||||||||||||||| || || ||||| || ||||| |||| Sbjct: 556 tgcaattttagagaagtttcagagctccactgagccagatcctgatgaagatggcattct 615 Query: 566 tggacgtggaggcaacctagtgatcaaatttcttgagaatgaggatataccagggtttgg 625 | |||||||||| ||| || || || |||||||||||||||||||||||||| ||||| Sbjct: 616 ccgtcgtggaggcagccttgtaattaagtttcttgagaatgaggatataccaggttttgg 675 Query: 626 caaattttgcaaaaaaaagttcaagaaagtgtcatggctgaggcctaaggcaacaagatc 685 ||||||||||||| | ||||||||||||||||| | |||| || ||||| |||||||| Sbjct: 676 caaattttgcaaagagaagttcaagaaagtgtccttattgagacccaaggcgacaagatc 735 Query: 686 tagttcgaggga 697 |||||||||||| Sbjct: 736 tagttcgaggga 747 >dbj|AK060050.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-A03, full insert sequence Length = 946 Score = 745 bits (376), Expect = 0.0 Identities = 598/672 (88%) Strand = Plus / Plus Query: 26 catgagcggcgcggcgggcaccgccgacttcttctaccgcgaggcccagcgcctcggcta 85 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 76 catgagcggcgcgggcggcaccgccgacttcttctaccgcgaggcgcagcgcctcggcta 135 Query: 86 cgtcgcccgctccgccttcaagctgatccagatacagaggcagcacaagctcatcacccc 145 ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 136 cgtcgcccgctccgcgttcaagctgatccagatacagaagcagcacaagctcatcgcccc 195 Query: 146 gggcgcggccgtcctcgacctcggctgcgcccccggcgcgtggctccaggtggcttgcca 205 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 196 cggcgccgccgtcctcgacctcggctgcgcccccggcgcgtggctccaggtggcgtgcca 255 Query: 206 gaacctgggtccgctcgagaagggcggcgtggtcgtcggcgttgatgtcaagaaggtgaa 265 ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| Sbjct: 256 gaacctgggtccgctcgagaagggcggggtgatcgtcggcgtcgatgtcaagaaggtgaa 315 Query: 266 ggtcccctcggcgcactgcgactcacgggtcagaacggtctgtgcggacgtgatggctct 325 ||| || || |||||||| ||||| ||||||| || || || || || ||||||||||| Sbjct: 316 ggttccatctgcgcactgtgactcgagggtcaggaccgtttgcgccgatgtgatggctct 375 Query: 326 gatgaagcagcaagtccgggcaatgtcgccgcaggaacgaggattctctgtgatattgtc 385 |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 376 gatgaagcagcaagctcgggcaatgtcgccacaggaacgaggattctctgtaatattgtc 435 Query: 386 cgacatgtgtccagtagtttcagggatcacaaccaaagatgctgctatatcttgtgagtt 445 |||||||| ||||||||||| || || |||||||||||||| ||||||||||| ||| | Sbjct: 436 agacatgtgcccagtagtttctggaattacaaccaaagatgcggctatatcttgcgagct 495 Query: 446 gggcatgcgtgcactctctttggcagttggcaaaataaaaataaaagattcagattatag 505 |||||||||||| || || ||||||||||| || || ||| |||||||||||||| | Sbjct: 496 gggcatgcgtgctctttcattggcagttggtaagatgaaagcaaaagattcagattgcat 555 Query: 506 tgcaagtatagagaagtttcagagctccactgaccctgaccctgacgaggatggtgttct 565 ||||| | ||||||||||||||||||||||||| || || ||||| || ||||| |||| Sbjct: 556 tgcaattttagagaagtttcagagctccactgagccagatcctgatgaagatggcattct 615 Query: 566 tggacgtggaggcaacctagtgatcaaatttcttgagaatgaggatataccagggtttgg 625 | |||||||||| ||| || || || |||||||||||||||||||||||||| ||||| Sbjct: 616 ccgtcgtggaggcagccttgtaattaagtttcttgagaatgaggatataccaggttttgg 675 Query: 626 caaattttgcaaaaaaaagttcaagaaagtgtcatggctgaggcctaaggcaacaagatc 685 ||||||||||||| | ||||||||||||||||| | |||| || ||||| |||||||| Sbjct: 676 caaattttgcaaagagaagttcaagaaagtgtccttattgagacccaaggcgacaagatc 735 Query: 686 tagttcgaggga 697 |||||||||||| Sbjct: 736 tagttcgaggga 747 >emb|CT830365.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126L02, full insert sequence Length = 1060 Score = 595 bits (300), Expect = e-166 Identities = 520/592 (87%), Gaps = 1/592 (0%) Strand = Plus / Plus Query: 106 agctgatccagatacagaggcagcacaagctcatcaccccgggcgcggccgtcctcgacc 165 |||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 271 agctgatccagatacagaagcagcacaagctcatcgcccccggcgccgccgtcctcgacc 330 Query: 166 tcggctgcgcccccggcgcgtggctccaggtggcttgccagaacctgggtccgctcgaga 225 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 331 tcggctgcgcccccggcgcgtggctccaggtggcgtgccagaacctgggtccgctcgaga 390 Query: 226 agggcggcgtggtcgtcggcgttgatgtcaagaaggtgaaggtcccctcggcgcactgcg 285 ||||||| ||| |||||||||| |||||||||||||||||||| || || |||||||| | Sbjct: 391 agggcggggtgatcgtcggcgtcgatgtcaagaaggtgaaggttccatctgcgcactgtg 450 Query: 286 actcacgggtcagaacggtctgtgcggacgtgatggctctgatgaagcagcaagtccggg 345 |||| ||||||| || || || || || ||||||||||||||||||||||||| |||| Sbjct: 451 actcgagggtcaggaccgtttgcgccgatgtgatggctctgatgaagcagcaagctcggg 510 Query: 346 caatgtcgccgcaggaacgaggattctctgtgatattgtccgacatgtgtccagtagttt 405 |||||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||| Sbjct: 511 caatgtcgccacaggaacgaggattctctgtaatattgtcagacatgtgcccagtagttt 570 Query: 406 cagggatcacaaccaaagatgctgctatatcttgtgagttgggcatgcgtgcactctctt 465 | || || |||||||||||||| ||||||||||| ||| ||||||||||||| || || | Sbjct: 571 ctggaattacaaccaaagatgcggctatatcttgcgagctgggcatgcgtgctctttcat 630 Query: 466 tggcagttggcaaaataaaaataaaagattcagattatagtgcaagtatagagaagtttc 525 |||||||||| || || ||| |||||||||||||| | ||||| | |||||||||||| Sbjct: 631 tggcagttggtaagatgaaagcaaaagattcagattgcattgcaattttagagaagtttc 690 Query: 526 agagctccactgaccctgaccctgacgaggatggtgttcttggacgtggaggcaacctag 585 ||||||||||||| || || ||||| | |||| |||| | |||||||||| ||| | Sbjct: 691 agagctccactgagccagatcctga-taatatggcattctccgtcgtggaggcagccttg 749 Query: 586 tgatcaaatttcttgagaatgaggatataccagggtttggcaaattttgcaaaaaaaagt 645 | || || |||||||||||||||||||||||||| |||||||||||||||||| | |||| Sbjct: 750 taattaagtttcttgagaatgaggatataccaggttttggcaaattttgcaaagagaagt 809 Query: 646 tcaagaaagtgtcatggctgaggcctaaggcaacaagatctagttcgaggga 697 ||||||||||||| | |||| || ||||| |||||||||||||||||||| Sbjct: 810 tcaagaaagtgtccttattgagacccaaggcgacaagatctagttcgaggga 861 Score = 131 bits (66), Expect = 6e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 26 catgagcggcgcggcgggcaccgccgacttcttctaccgcgaggcccagcgcctcggcta 85 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 101 catgagcggcgcgggcggcaccgccgacttcttctaccgcgaggcgcagcgcctcggcta 160 Query: 86 cgtcgcccgctccgccttcaag 107 ||||||||||||||| |||||| Sbjct: 161 cgtcgcccgctccgcgttcaag 182 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 228 bits (115), Expect = 3e-56 Identities = 226/263 (85%) Strand = Plus / Plus Query: 357 caggaacgaggattctctgtgatattgtccgacatgtgtccagtagtttcagggatcaca 416 |||||||||||||||||||| |||||||| |||||||| ||||||||||| || || ||| Sbjct: 34317343 caggaacgaggattctctgtaatattgtcagacatgtgcccagtagtttctggaattaca 34317402 Query: 417 accaaagatgctgctatatcttgtgagttgggcatgcgtgcactctctttggcagttggc 476 ||||||||||| ||||||||||| ||| ||||||||||||| || || ||||||||||| Sbjct: 34317403 accaaagatgcggctatatcttgcgagctgggcatgcgtgctctttcattggcagttggt 34317462 Query: 477 aaaataaaaataaaagattcagattatagtgcaagtatagagaagtttcagagctccact 536 || || ||| |||||||||||||| | ||||| | ||||||||||||||||||||||| Sbjct: 34317463 aagatgaaagcaaaagattcagattgcattgcaattttagagaagtttcagagctccact 34317522 Query: 537 gaccctgaccctgacgaggatggtgttcttggacgtggaggcaacctagtgatcaaattt 596 || || || ||||| || ||||| |||| | |||||||||| ||| || || || ||| Sbjct: 34317523 gagccagatcctgatgaagatggcattctccgtcgtggaggcagccttgtaattaagttt 34317582 Query: 597 cttgagaatgaggatataccagg 619 ||||||||||||||||||||||| Sbjct: 34317583 cttgagaatgaggatataccagg 34317605 Score = 151 bits (76), Expect = 6e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 106 agctgatccagatacagaggcagcacaagctcatcaccccgggcgcggccgtcctcgacc 165 |||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 34316036 agctgatccagatacagaagcagcacaagctcatcgcccccggcgccgccgtcctcgacc 34316095 Query: 166 tcggctgcgcccccggcgcgtggctccaggtg 197 |||||||||||||||||||||||||||||||| Sbjct: 34316096 tcggctgcgcccccggcgcgtggctccaggtg 34316127 Score = 131 bits (66), Expect = 6e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 26 catgagcggcgcggcgggcaccgccgacttcttctaccgcgaggcccagcgcctcggcta 85 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 34315866 catgagcggcgcgggcggcaccgccgacttcttctaccgcgaggcgcagcgcctcggcta 34315925 Query: 86 cgtcgcccgctccgccttcaag 107 ||||||||||||||| |||||| Sbjct: 34315926 cgtcgcccgctccgcgttcaag 34315947 Score = 97.6 bits (49), Expect = 8e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 193 aggtggcttgccagaacctgggtccgctcgagaagggcggcgtggtcgtcggcgttgatg 252 ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| |||| Sbjct: 34316192 aggtggcgtgccagaacctgggtccgctcgagaagggcggggtgatcgtcggcgtcgatg 34316251 Query: 253 tcaag 257 ||||| Sbjct: 34316252 tcaag 34316256 Score = 89.7 bits (45), Expect = 2e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 256 agaaggtgaaggtcccctcggcgcactgcgactcacgggtcagaacggtctgtgcggacg 315 ||||||||||||| || || |||||||| ||||| ||||||| || || || || || | Sbjct: 34316346 agaaggtgaaggttccatctgcgcactgtgactcgagggtcaggaccgtttgcgccgatg 34316405 Query: 316 tgatggctctgatgaagcagcaagtccgggcaatgtcgccgcagg 360 |||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 34316406 tgatggctctgatgaagcagcaagctcgggcaatgtcgccacagg 34316450 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 621 tttggcaaattttgcaaaaaaaagttcaagaaagtgtcatggctgaggcctaaggcaaca 680 |||||||||||||||||| | ||||||||||||||||| | |||| || ||||| ||| Sbjct: 34317712 tttggcaaattttgcaaagagaagttcaagaaagtgtccttattgagacccaaggcgaca 34317771 Query: 681 agatctagttcgaggga 697 ||||||||||||||||| Sbjct: 34317772 agatctagttcgaggga 34317788 >gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 228 bits (115), Expect = 3e-56 Identities = 226/263 (85%) Strand = Plus / Minus Query: 357 caggaacgaggattctctgtgatattgtccgacatgtgtccagtagtttcagggatcaca 416 |||||||||||||||||||| |||||||| |||||||| ||||||||||| || || ||| Sbjct: 108127 caggaacgaggattctctgtaatattgtcagacatgtgcccagtagtttctggaattaca 108068 Query: 417 accaaagatgctgctatatcttgtgagttgggcatgcgtgcactctctttggcagttggc 476 ||||||||||| ||||||||||| ||| ||||||||||||| || || ||||||||||| Sbjct: 108067 accaaagatgcggctatatcttgcgagctgggcatgcgtgctctttcattggcagttggt 108008 Query: 477 aaaataaaaataaaagattcagattatagtgcaagtatagagaagtttcagagctccact 536 || || ||| |||||||||||||| | ||||| | ||||||||||||||||||||||| Sbjct: 108007 aagatgaaagcaaaagattcagattgcattgcaattttagagaagtttcagagctccact 107948 Query: 537 gaccctgaccctgacgaggatggtgttcttggacgtggaggcaacctagtgatcaaattt 596 || || || ||||| || ||||| |||| | |||||||||| ||| || || || ||| Sbjct: 107947 gagccagatcctgatgaagatggcattctccgtcgtggaggcagccttgtaattaagttt 107888 Query: 597 cttgagaatgaggatataccagg 619 ||||||||||||||||||||||| Sbjct: 107887 cttgagaatgaggatataccagg 107865 Score = 151 bits (76), Expect = 6e-33 Identities = 88/92 (95%) Strand = Plus / Minus Query: 106 agctgatccagatacagaggcagcacaagctcatcaccccgggcgcggccgtcctcgacc 165 |||||||||||||||||| |||||||||||||||| |||| ||||| ||||||||||||| Sbjct: 109434 agctgatccagatacagaagcagcacaagctcatcgcccccggcgccgccgtcctcgacc 109375 Query: 166 tcggctgcgcccccggcgcgtggctccaggtg 197 |||||||||||||||||||||||||||||||| Sbjct: 109374 tcggctgcgcccccggcgcgtggctccaggtg 109343 Score = 131 bits (66), Expect = 6e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 26 catgagcggcgcggcgggcaccgccgacttcttctaccgcgaggcccagcgcctcggcta 85 |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 109604 catgagcggcgcgggcggcaccgccgacttcttctaccgcgaggcgcagcgcctcggcta 109545 Query: 86 cgtcgcccgctccgccttcaag 107 ||||||||||||||| |||||| Sbjct: 109544 cgtcgcccgctccgcgttcaag 109523 Score = 97.6 bits (49), Expect = 8e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 193 aggtggcttgccagaacctgggtccgctcgagaagggcggcgtggtcgtcggcgttgatg 252 ||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| |||| Sbjct: 109278 aggtggcgtgccagaacctgggtccgctcgagaagggcggggtgatcgtcggcgtcgatg 109219 Query: 253 tcaag 257 ||||| Sbjct: 109218 tcaag 109214 Score = 89.7 bits (45), Expect = 2e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 256 agaaggtgaaggtcccctcggcgcactgcgactcacgggtcagaacggtctgtgcggacg 315 ||||||||||||| || || |||||||| ||||| ||||||| || || || || || | Sbjct: 109124 agaaggtgaaggttccatctgcgcactgtgactcgagggtcaggaccgtttgcgccgatg 109065 Query: 316 tgatggctctgatgaagcagcaagtccgggcaatgtcgccgcagg 360 |||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 109064 tgatggctctgatgaagcagcaagctcgggcaatgtcgccacagg 109020 Score = 81.8 bits (41), Expect = 5e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 621 tttggcaaattttgcaaaaaaaagttcaagaaagtgtcatggctgaggcctaaggcaaca 680 |||||||||||||||||| | ||||||||||||||||| | |||| || ||||| ||| Sbjct: 107758 tttggcaaattttgcaaagagaagttcaagaaagtgtccttattgagacccaaggcgaca 107699 Query: 681 agatctagttcgaggga 697 ||||||||||||||||| Sbjct: 107698 agatctagttcgaggga 107682