BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem103p08 (901 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059294.1| Oryza sativa (japonica cultivar-group) Os04g... 468 e-128 dbj|AK108378.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-128 gb|AY111187.1| Zea mays CL7288_1 mRNA sequence 400 e-108 emb|CR855098.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 208 3e-50 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 208 3e-50 >ref|NM_001059294.1| Oryza sativa (japonica cultivar-group) Os04g0415200 (Os04g0415200) mRNA, complete cds Length = 903 Score = 468 bits (236), Expect = e-128 Identities = 374/420 (89%) Strand = Plus / Plus Query: 119 ggttcaggatgtctatcgaattactgacgaaatttctcacggtgctgttcggatatgcta 178 ||||||||||||| | ||||| ||||||||| ||||||| ||||||||| ||||||| Sbjct: 128 ggttcaggatgtcggtggaattcctgacgaaagcgctcacggcgctgttcgggtatgcta 187 Query: 179 tgccggcgttggagtgcttcaaggcgatcgagcagcggcccggccggcccgatcagctcc 238 |||||||||||||||||||||||||||||||||||||||| || ||| | || || |||| Sbjct: 188 tgccggcgttggagtgcttcaaggcgatcgagcagcggcctggtcggacggaccatctcc 247 Query: 239 ggttttggtgtgaatattggatcatactagtcatcatggtcatattcgatgaaattgcgg 298 |||||||||| ||||||||||||||||||| ||| | |||||||||||||| || || | Sbjct: 248 ggttttggtgccaatattggatcatactagtaatcctcgtcatattcgatgatatcgctg 307 Query: 299 gcgccctgacatcgaggattccaatgtactctgaactcaagctcgccttcctcgtctacc 358 | | ||| || || | ||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 308 gtgtcctcacctccaagataccaatgtactctgaactcagactcgccttcctcgtctacc 367 Query: 359 tgtggtacccccagacaaggggaactgacatcgtgtacgaaaccttcatccggccgctgg 418 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| Sbjct: 368 tgtggtacccccagacaaggggaactgacatcgtgtacgacaccttcctgcggccgctgg 427 Query: 419 tgatgcagtacgagcccaacatcgaggagaggctgcggtacctgcgggccaacgccggcg 478 ||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| ||||||| Sbjct: 428 tgatgcagtaccagcccaacatcgaggagcggctgcgctacctgcgtgccaatgccggcg 487 Query: 479 acctcgtcgtcttctacctcaagaacttcaccgagaggggctacgagctcttcctccggg 538 || | || ||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 488 acattctcatcttctacctcaagaacttcaccgataggggctacgatctcttcctccggg 547 >dbj|AK108378.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-E03, full insert sequence Length = 904 Score = 468 bits (236), Expect = e-128 Identities = 374/420 (89%) Strand = Plus / Plus Query: 119 ggttcaggatgtctatcgaattactgacgaaatttctcacggtgctgttcggatatgcta 178 ||||||||||||| | ||||| ||||||||| ||||||| ||||||||| ||||||| Sbjct: 128 ggttcaggatgtcggtggaattcctgacgaaagcgctcacggcgctgttcgggtatgcta 187 Query: 179 tgccggcgttggagtgcttcaaggcgatcgagcagcggcccggccggcccgatcagctcc 238 |||||||||||||||||||||||||||||||||||||||| || ||| | || || |||| Sbjct: 188 tgccggcgttggagtgcttcaaggcgatcgagcagcggcctggtcggacggaccatctcc 247 Query: 239 ggttttggtgtgaatattggatcatactagtcatcatggtcatattcgatgaaattgcgg 298 |||||||||| ||||||||||||||||||| ||| | |||||||||||||| || || | Sbjct: 248 ggttttggtgccaatattggatcatactagtaatcctcgtcatattcgatgatatcgctg 307 Query: 299 gcgccctgacatcgaggattccaatgtactctgaactcaagctcgccttcctcgtctacc 358 | | ||| || || | ||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 308 gtgtcctcacctccaagataccaatgtactctgaactcagactcgccttcctcgtctacc 367 Query: 359 tgtggtacccccagacaaggggaactgacatcgtgtacgaaaccttcatccggccgctgg 418 |||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| Sbjct: 368 tgtggtacccccagacaaggggaactgacatcgtgtacgacaccttcctgcggccgctgg 427 Query: 419 tgatgcagtacgagcccaacatcgaggagaggctgcggtacctgcgggccaacgccggcg 478 ||||||||||| ||||||||||||||||| ||||||| |||||||| ||||| ||||||| Sbjct: 428 tgatgcagtaccagcccaacatcgaggagcggctgcgctacctgcgtgccaatgccggcg 487 Query: 479 acctcgtcgtcttctacctcaagaacttcaccgagaggggctacgagctcttcctccggg 538 || | || ||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 488 acattctcatcttctacctcaagaacttcaccgataggggctacgatctcttcctccggg 547 >gb|AY111187.1| Zea mays CL7288_1 mRNA sequence Length = 1098 Score = 400 bits (202), Expect = e-108 Identities = 414/482 (85%), Gaps = 2/482 (0%) Strand = Plus / Plus Query: 125 ggatgtctatcgaattactgacgaaatttctcacggtgctgttcggatatgctatgccgg 184 ||||||| ||||| | ||||||||||| ||||| |||||||||| ||||| ||||| | Sbjct: 128 ggatgtcgatcgagctcctgacgaaattcctcacattgctgttcgggtatgccatgccag 187 Query: 185 cgttggagtgcttcaaggcgatcgagc-agcggcccggccggcccgatcagctccggttt 243 || |||||||||||||||||||||| | |||||||||||||| ||||||||||| | Sbjct: 188 cgctggagtgcttcaaggcgatcgaaccagcggcccggccggga-gatcagctccgcgtc 246 Query: 244 tggtgtgaatattggatcatactagtcatcatggtcatattcgatgaaattgcgggcgcc 303 ||||| || ||||||||||| |||||| || | ||||| ||||| |||||||| || | Sbjct: 247 tggtgcgagtattggatcatcctagtcctcctcgtcatgttcgacgaaattgctggggtt 306 Query: 304 ctgacatcgaggattccaatgtactctgaactcaagctcgccttcctcgtctacctgtgg 363 || | || | ||| |||||||||| || || ||||| ||||||||||||||| ||||| Sbjct: 307 ctcatttctaagatcccaatgtactacgagctgaagctagccttcctcgtctacttgtgg 366 Query: 364 tacccccagacaaggggaactgacatcgtgtacgaaaccttcatccggccgctggtgatg 423 ||||| ||||||||||||| |||||||||||||| |||||| ||| ||||||||||||| Sbjct: 367 tacccaaagacaaggggaacggacatcgtgtacgagaccttcctccagccgctggtgatg 426 Query: 424 cagtacgagcccaacatcgaggagaggctgcggtacctgcgggccaacgccggcgacctc 483 |||||| ||||||||||||||| ||||| | ||||||||| ||||| ||||| ||| || Sbjct: 427 cagtaccagcccaacatcgaggccaggctccagtacctgcgcgccaatgccggtgacatc 486 Query: 484 gtcgtcttctacctcaagaacttcaccgagaggggctacgagctcttcctccgggcactc 543 ||||||||||||||||||||||||||||||| |||||||||||||||||||| | || Sbjct: 487 ctcgtcttctacctcaagaacttcaccgagagaggctacgagctcttcctccgagtgctt 546 Query: 544 gacttcgtccggtctcaggcgtccagaggctcaagaacaaggagtttcttctcgttccga 603 |||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 547 gactacgtccggtcgcaggcgtccagagggtcaagaacacggagtttcttctcgttccga 606 Query: 604 gg 605 || Sbjct: 607 gg 608 >emb|CR855098.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0622F05, complete sequence Length = 69925 Score = 208 bits (105), Expect = 3e-50 Identities = 147/161 (91%) Strand = Plus / Plus Query: 378 gggaactgacatcgtgtacgaaaccttcatccggccgctggtgatgcagtacgagcccaa 437 ||||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||||| Sbjct: 60530 gggaactgacatcgtgtacgacaccttcctgcggccgctggtgatgcagtaccagcccaa 60589 Query: 438 catcgaggagaggctgcggtacctgcgggccaacgccggcgacctcgtcgtcttctacct 497 |||||||||| ||||||| |||||||| ||||| ||||||||| | || |||||||||| Sbjct: 60590 catcgaggagcggctgcgctacctgcgtgccaatgccggcgacattctcatcttctacct 60649 Query: 498 caagaacttcaccgagaggggctacgagctcttcctccggg 538 ||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 60650 caagaacttcaccgataggggctacgatctcttcctccggg 60690 Score = 121 bits (61), Expect = 5e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 162 gctgttcggatatgctatgccggcgttggagtgcttcaaggcgatcgagcagcggcccgg 221 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 59614 gctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcagcggcctgg 59673 Query: 222 ccggcccgatcagctccggttttggtgtgaatattgg 258 ||| | || || |||||||||||||| |||||||| Sbjct: 59674 tcggacggaccatctccggttttggtgccaatattgg 59710 Score = 109 bits (55), Expect = 2e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 313 aggattccaatgtactctgaactcaagctcgccttcctcgtctacctgtggtacccccag 372 ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 60194 aggataccaatgtactctgaactcagactcgccttcctcgtctacctgtggtacccccag 60253 Query: 373 acaaggg 379 ||||||| Sbjct: 60254 acaaggg 60260 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 208 bits (105), Expect = 3e-50 Identities = 147/161 (91%) Strand = Plus / Plus Query: 378 gggaactgacatcgtgtacgaaaccttcatccggccgctggtgatgcagtacgagcccaa 437 ||||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||||| Sbjct: 20536325 gggaactgacatcgtgtacgacaccttcctgcggccgctggtgatgcagtaccagcccaa 20536384 Query: 438 catcgaggagaggctgcggtacctgcgggccaacgccggcgacctcgtcgtcttctacct 497 |||||||||| ||||||| |||||||| ||||| ||||||||| | || |||||||||| Sbjct: 20536385 catcgaggagcggctgcgctacctgcgtgccaatgccggcgacattctcatcttctacct 20536444 Query: 498 caagaacttcaccgagaggggctacgagctcttcctccggg 538 ||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 20536445 caagaacttcaccgataggggctacgatctcttcctccggg 20536485 Score = 121 bits (61), Expect = 5e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 162 gctgttcggatatgctatgccggcgttggagtgcttcaaggcgatcgagcagcggcccgg 221 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 20535409 gctgttcgggtatgctatgccggcgttggagtgcttcaaggcgatcgagcagcggcctgg 20535468 Query: 222 ccggcccgatcagctccggttttggtgtgaatattgg 258 ||| | || || |||||||||||||| |||||||| Sbjct: 20535469 tcggacggaccatctccggttttggtgccaatattgg 20535505 Score = 109 bits (55), Expect = 2e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 313 aggattccaatgtactctgaactcaagctcgccttcctcgtctacctgtggtacccccag 372 ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20535989 aggataccaatgtactctgaactcagactcgccttcctcgtctacctgtggtacccccag 20536048 Query: 373 acaaggg 379 ||||||| Sbjct: 20536049 acaaggg 20536055