BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem103l12
         (862 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str...   325   2e-85
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   325   2e-85
gb|DQ244199.1| Zea mays clone 3114 mRNA sequence                      224   5e-55

>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score =  325 bits (164), Expect = 2e-85
 Identities = 279/316 (88%), Gaps = 6/316 (1%)
 Strand = Plus / Plus

                                                                         
Query: 200   cgccaccgcctccttctacgacgtcctcggcctccacgcgggcgccagcgcccaggagat 259
             |||| ||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||
Sbjct: 75523 cgccgccgcctcgttctacgacgtcctcggcctccacgcgggggccagcgcgcgggagat 75582

                                                                         
Query: 260   caaggccgcgtaccgcctcctggcccgcgccgtccacccggacgcgtcgccgcaccccgc 319
             ||||| ||||||||||| ||| || |||||||||||||||||||| || |||||||||||
Sbjct: 75583 caaggacgcgtaccgccgcctcgcacgcgccgtccacccggacgcctccccgcaccccgc 75642

                                                                         
Query: 320   cgcc---tcagccgaggacttcatccgcgtccacgccgcctactgcacgctctcggaccc 376
             ||||   ||  |||| |||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct: 75643 cgccgcgtcctccgacgacttcatccgcgtccacgccgcctactccaccctctccgaccc 75702

                                                                         
Query: 377   cgacaagcgcgccgactacgaccgccgcctgctcctctccgctgtcggacgccgccgcgc 436
             |||||||||||||||||||||||||||||| ||||||  ||| | ||| |||||||||||
Sbjct: 75703 cgacaagcgcgccgactacgaccgccgcctcctcctcctcgccgccgggcgccgccgcgc 75762

                                                                         
Query: 437   g---ccggcgctcggccgctcgccgtcgttccccgggtaccgccgccggacgtgggagac 493
                 ||| | ||||||||||||||| ||||||||| |  ||||||||| |||||||||||
Sbjct: 75763 caccccgtccctcggccgctcgccgacgttccccgcgcgccgccgccgcacgtgggagac 75822

                             
Query: 494   cgaccagtgctggtga 509
             ||||||||||||||||
Sbjct: 75823 cgaccagtgctggtga 75838


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  325 bits (164), Expect = 2e-85
 Identities = 279/316 (88%), Gaps = 6/316 (1%)
 Strand = Plus / Minus

                                                                           
Query: 200     cgccaccgcctccttctacgacgtcctcggcctccacgcgggcgccagcgcccaggagat 259
               |||| ||||||| ||||||||||||||||||||||||||||| |||||||| | ||||||
Sbjct: 7637602 cgccgccgcctcgttctacgacgtcctcggcctccacgcgggggccagcgcgcgggagat 7637543

                                                                           
Query: 260     caaggccgcgtaccgcctcctggcccgcgccgtccacccggacgcgtcgccgcaccccgc 319
               ||||| ||||||||||| ||| || |||||||||||||||||||| || |||||||||||
Sbjct: 7637542 caaggacgcgtaccgccgcctcgcacgcgccgtccacccggacgcctccccgcaccccgc 7637483

                                                                           
Query: 320     cgcc---tcagccgaggacttcatccgcgtccacgccgcctactgcacgctctcggaccc 376
               ||||   ||  |||| |||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct: 7637482 cgccgcgtcctccgacgacttcatccgcgtccacgccgcctactccaccctctccgaccc 7637423

                                                                           
Query: 377     cgacaagcgcgccgactacgaccgccgcctgctcctctccgctgtcggacgccgccgcgc 436
               |||||||||||||||||||||||||||||| ||||||  ||| | ||| |||||||||||
Sbjct: 7637422 cgacaagcgcgccgactacgaccgccgcctcctcctcctcgccgccgggcgccgccgcgc 7637363

                                                                           
Query: 437     g---ccggcgctcggccgctcgccgtcgttccccgggtaccgccgccggacgtgggagac 493
                   ||| | ||||||||||||||| ||||||||| |  ||||||||| |||||||||||
Sbjct: 7637362 caccccgtccctcggccgctcgccgacgttccccgcgcgccgccgccgcacgtgggagac 7637303

                               
Query: 494     cgaccagtgctggtga 509
               ||||||||||||||||
Sbjct: 7637302 cgaccagtgctggtga 7637287


>gb|DQ244199.1| Zea mays clone 3114 mRNA sequence
          Length = 786

 Score =  224 bits (113), Expect = 5e-55
 Identities = 185/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 209 ctccttctacgacgtcctcggcctccacgcgggcgccagcgcccaggagatcaaggccgc 268
           |||||||||||||||||||||||||| | | || |||||||| | ||| |||||||||||
Sbjct: 166 ctccttctacgacgtcctcggcctccgccccggggccagcgcgcgggaaatcaaggccgc 225

                                                                       
Query: 269 gtaccgcctcctggcccgcgccgtccacccggacgcgtcgccgcaccccgccgcctcagc 328
           |||||||| |||||| | ||||||||||||||||||  | ||||||||| |  | || ||
Sbjct: 226 gtaccgccgcctggcgctcgccgtccacccggacgccgccccgcaccccacatcgtccgc 285

                                                                       
Query: 329 cgaggacttcatccgcgtccacgccgcctactgcacgctctcggaccccgacaagcgcgc 388
           |||||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||||
Sbjct: 286 cgaggacttcatccgcgtccacgcggcctactccacgctctccgatcccgacaagcgcgc 345

                                        
Query: 389 cgactacgaccgccgcctgctcctctccg 417
           |||||||||||||||||| ||||| ||||
Sbjct: 346 cgactacgaccgccgcctcctcctttccg 374



 Score = 93.7 bits (47), Expect = 1e-15
 Identities = 47/47 (100%)
 Strand = Plus / Plus

                                                          
Query: 103 cctccccgcgcctccacgcgccgccgcccctctccgcctccttctcc 149
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  cctccccgcgcctccacgcgccgccgcccctctccgcctccttctcc 127