BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem102j10 (1056 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 278 4e-71 dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic D... 278 4e-71 dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic D... 278 4e-71 emb|CT831517.1| Oryza sativa (indica cultivar-group) cDNA clone:... 258 4e-65 emb|CT831516.1| Oryza sativa (indica cultivar-group) cDNA clone:... 258 4e-65 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 278 bits (140), Expect = 4e-71 Identities = 353/424 (83%) Strand = Plus / Minus Query: 613 ctaaatttggattgctttgctttggtagatttgccatcgcaacgaggccactgaatggat 672 ||||||||| |||| |||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 26877425 ctaaatttgaattgttttgctttggaggattagccatcgcaacaaggccaccgaatggat 26877366 Query: 673 cgccaaacagattggatagtccaacgtgagaaggaggggtagaatactgaggctgttgct 732 | ||||| ||||||||| |||| | ||||||||| | | ||||||||| | ||| |||| Sbjct: 26877365 caccaaatggattggataatccatcatgagaaggaagagcagaatactgtgtctgctgct 26877306 Query: 733 gtttctggtatgtttgcggtggcgtcatcactgtttgctgttgttgctgtacctgaaagt 792 | | |||||||||||||| ||| | |||| ||||||| |||||||| | |||| | | Sbjct: 26877305 gctgatggtatgtttgcggcggcaacgtcaccatttgctgctgttgctgaatctgataat 26877246 Query: 793 actgttgctgccgcacctggtaatactgctgctgctgtgccatcatggctaactgcacat 852 |||| |||||| || |||| |||| ||| ||||||||| ||||||||||||||| |||| Sbjct: 26877245 actgctgctgctgctcctgataatcctgatgctgctgttgcatcatggctaactgaacat 26877186 Query: 853 tcgatcgtggcgcgaagccattggacatggcaaatggatcgttagggtcaaatgtgttcg 912 |||| ||||||||||| ||| ||||| |||||||||||||| || ||||||| ||| Sbjct: 26877185 tcgacggtggcgcgaagttattagacattgcaaatggatcgttgggatcaaatgggtttc 26877126 Query: 913 cggcgaggctgttggtgtagatcacaccggctatttgctgcctccttgcctcatcttcat 972 | || | |||| | ||||| | ||| ||||||||||||||||||||| |||||||||| Sbjct: 26877125 ctgcaacgctgccgttgtaggttgcactggctatttgctgcctccttgcttcatcttcat 26877066 Query: 973 ataggctgtctagcaatagcttgtcaaaccccccagcctgttaagcaaatgcaaataagt 1032 | ||||||||||||| |||||||||||| || |||||||||| ||||||||| |||||| Sbjct: 26877065 acaggctgtctagcagtagcttgtcaaatcctccagcctgttgggcaaatgcagataagt 26877006 Query: 1033 tatt 1036 |||| Sbjct: 26877005 tatt 26877002 Score = 153 bits (77), Expect = 2e-33 Identities = 214/259 (82%), Gaps = 3/259 (1%) Strand = Plus / Minus Query: 190 gcgcgatgaagcggcggctggaggaggccatcgatcgcgctatggcctggatggccgagc 249 |||||||| ||||||| |||||||||||||||| |||| ||||| ||||| | |||| Sbjct: 26878655 gcgcgatggcgcggcggatggaggaggccatcgacggcgccatggcgcggatgtcggagc 26878596 Query: 250 ccgactgggcgccgttccggctcgggacctcctactacgcaccgccccggcccaccggcg 309 |||| |||||||||||||||| |||||| || |||||||| ||||| |||||| |||||| Sbjct: 26878595 ccgagtgggcgccgttccggcccgggacgtcgtactacgcgccgccgcggcccgccggcg 26878536 Query: 310 cggccctcgggctgctcgcgctcataagcagtggcggcg---ggatggggccgctaccgc 366 | |||| |||| |||| |||||| | ||| | || || ||||||||||| | || | Sbjct: 26878535 ccgcccgcgggttgctggcgctcgtcagccacgccgccgcgaggatggggccggtgcccc 26878476 Query: 367 gggcgctctccagcgacgaggcgcgcgccgtcgcctccgcctcccgtggatacccctgct 426 | ||||| ||| |||||||||||||||||||| | |||||||||| |||| ||||||| Sbjct: 26878475 gcgcgctttccgccgacgaggcgcgcgccgtcgacgccgcctcccgcggattcccctgca 26878416 Query: 427 caacctatttcatcgatgg 445 | ||||| ||||||||||| Sbjct: 26878415 cgacctacttcatcgatgg 26878397 >dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 278 bits (140), Expect = 4e-71 Identities = 353/424 (83%) Strand = Plus / Minus Query: 613 ctaaatttggattgctttgctttggtagatttgccatcgcaacgaggccactgaatggat 672 ||||||||| |||| |||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 1186 ctaaatttgaattgttttgctttggaggattagccatcgcaacaaggccaccgaatggat 1127 Query: 673 cgccaaacagattggatagtccaacgtgagaaggaggggtagaatactgaggctgttgct 732 | ||||| ||||||||| |||| | ||||||||| | | ||||||||| | ||| |||| Sbjct: 1126 caccaaatggattggataatccatcatgagaaggaagagcagaatactgtgtctgctgct 1067 Query: 733 gtttctggtatgtttgcggtggcgtcatcactgtttgctgttgttgctgtacctgaaagt 792 | | |||||||||||||| ||| | |||| ||||||| |||||||| | |||| | | Sbjct: 1066 gctgatggtatgtttgcggcggcaacgtcaccatttgctgctgttgctgaatctgataat 1007 Query: 793 actgttgctgccgcacctggtaatactgctgctgctgtgccatcatggctaactgcacat 852 |||| |||||| || |||| |||| ||| ||||||||| ||||||||||||||| |||| Sbjct: 1006 actgctgctgctgctcctgataatcctgatgctgctgttgcatcatggctaactgaacat 947 Query: 853 tcgatcgtggcgcgaagccattggacatggcaaatggatcgttagggtcaaatgtgttcg 912 |||| ||||||||||| ||| ||||| |||||||||||||| || ||||||| ||| Sbjct: 946 tcgacggtggcgcgaagttattagacattgcaaatggatcgttgggatcaaatgggtttc 887 Query: 913 cggcgaggctgttggtgtagatcacaccggctatttgctgcctccttgcctcatcttcat 972 | || | |||| | ||||| | ||| ||||||||||||||||||||| |||||||||| Sbjct: 886 ctgcaacgctgccgttgtaggttgcactggctatttgctgcctccttgcttcatcttcat 827 Query: 973 ataggctgtctagcaatagcttgtcaaaccccccagcctgttaagcaaatgcaaataagt 1032 | ||||||||||||| |||||||||||| || |||||||||| ||||||||| |||||| Sbjct: 826 acaggctgtctagcagtagcttgtcaaatcctccagcctgttgggcaaatgcagataagt 767 Query: 1033 tatt 1036 |||| Sbjct: 766 tatt 763 Score = 153 bits (77), Expect = 2e-33 Identities = 214/259 (82%), Gaps = 3/259 (1%) Strand = Plus / Minus Query: 190 gcgcgatgaagcggcggctggaggaggccatcgatcgcgctatggcctggatggccgagc 249 |||||||| ||||||| |||||||||||||||| |||| ||||| ||||| | |||| Sbjct: 2416 gcgcgatggcgcggcggatggaggaggccatcgacggcgccatggcgcggatgtcggagc 2357 Query: 250 ccgactgggcgccgttccggctcgggacctcctactacgcaccgccccggcccaccggcg 309 |||| |||||||||||||||| |||||| || |||||||| ||||| |||||| |||||| Sbjct: 2356 ccgagtgggcgccgttccggcccgggacgtcgtactacgcgccgccgcggcccgccggcg 2297 Query: 310 cggccctcgggctgctcgcgctcataagcagtggcggcg---ggatggggccgctaccgc 366 | |||| |||| |||| |||||| | ||| | || || ||||||||||| | || | Sbjct: 2296 ccgcccgcgggttgctggcgctcgtcagccacgccgccgcgaggatggggccggtgcccc 2237 Query: 367 gggcgctctccagcgacgaggcgcgcgccgtcgcctccgcctcccgtggatacccctgct 426 | ||||| ||| |||||||||||||||||||| | |||||||||| |||| ||||||| Sbjct: 2236 gcgcgctttccgccgacgaggcgcgcgccgtcgacgccgcctcccgcggattcccctgca 2177 Query: 427 caacctatttcatcgatgg 445 | ||||| ||||||||||| Sbjct: 2176 cgacctacttcatcgatgg 2158 >dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 278 bits (140), Expect = 4e-71 Identities = 353/424 (83%) Strand = Plus / Minus Query: 613 ctaaatttggattgctttgctttggtagatttgccatcgcaacgaggccactgaatggat 672 ||||||||| |||| |||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 132051 ctaaatttgaattgttttgctttggaggattagccatcgcaacaaggccaccgaatggat 131992 Query: 673 cgccaaacagattggatagtccaacgtgagaaggaggggtagaatactgaggctgttgct 732 | ||||| ||||||||| |||| | ||||||||| | | ||||||||| | ||| |||| Sbjct: 131991 caccaaatggattggataatccatcatgagaaggaagagcagaatactgtgtctgctgct 131932 Query: 733 gtttctggtatgtttgcggtggcgtcatcactgtttgctgttgttgctgtacctgaaagt 792 | | |||||||||||||| ||| | |||| ||||||| |||||||| | |||| | | Sbjct: 131931 gctgatggtatgtttgcggcggcaacgtcaccatttgctgctgttgctgaatctgataat 131872 Query: 793 actgttgctgccgcacctggtaatactgctgctgctgtgccatcatggctaactgcacat 852 |||| |||||| || |||| |||| ||| ||||||||| ||||||||||||||| |||| Sbjct: 131871 actgctgctgctgctcctgataatcctgatgctgctgttgcatcatggctaactgaacat 131812 Query: 853 tcgatcgtggcgcgaagccattggacatggcaaatggatcgttagggtcaaatgtgttcg 912 |||| ||||||||||| ||| ||||| |||||||||||||| || ||||||| ||| Sbjct: 131811 tcgacggtggcgcgaagttattagacattgcaaatggatcgttgggatcaaatgggtttc 131752 Query: 913 cggcgaggctgttggtgtagatcacaccggctatttgctgcctccttgcctcatcttcat 972 | || | |||| | ||||| | ||| ||||||||||||||||||||| |||||||||| Sbjct: 131751 ctgcaacgctgccgttgtaggttgcactggctatttgctgcctccttgcttcatcttcat 131692 Query: 973 ataggctgtctagcaatagcttgtcaaaccccccagcctgttaagcaaatgcaaataagt 1032 | ||||||||||||| |||||||||||| || |||||||||| ||||||||| |||||| Sbjct: 131691 acaggctgtctagcagtagcttgtcaaatcctccagcctgttgggcaaatgcagataagt 131632 Query: 1033 tatt 1036 |||| Sbjct: 131631 tatt 131628 Score = 153 bits (77), Expect = 2e-33 Identities = 214/259 (82%), Gaps = 3/259 (1%) Strand = Plus / Minus Query: 190 gcgcgatgaagcggcggctggaggaggccatcgatcgcgctatggcctggatggccgagc 249 |||||||| ||||||| |||||||||||||||| |||| ||||| ||||| | |||| Sbjct: 133281 gcgcgatggcgcggcggatggaggaggccatcgacggcgccatggcgcggatgtcggagc 133222 Query: 250 ccgactgggcgccgttccggctcgggacctcctactacgcaccgccccggcccaccggcg 309 |||| |||||||||||||||| |||||| || |||||||| ||||| |||||| |||||| Sbjct: 133221 ccgagtgggcgccgttccggcccgggacgtcgtactacgcgccgccgcggcccgccggcg 133162 Query: 310 cggccctcgggctgctcgcgctcataagcagtggcggcg---ggatggggccgctaccgc 366 | |||| |||| |||| |||||| | ||| | || || ||||||||||| | || | Sbjct: 133161 ccgcccgcgggttgctggcgctcgtcagccacgccgccgcgaggatggggccggtgcccc 133102 Query: 367 gggcgctctccagcgacgaggcgcgcgccgtcgcctccgcctcccgtggatacccctgct 426 | ||||| ||| |||||||||||||||||||| | |||||||||| |||| ||||||| Sbjct: 133101 gcgcgctttccgccgacgaggcgcgcgccgtcgacgccgcctcccgcggattcccctgca 133042 Query: 427 caacctatttcatcgatgg 445 | ||||| ||||||||||| Sbjct: 133041 cgacctacttcatcgatgg 133023 >emb|CT831517.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN011A11, full insert sequence Length = 711 Score = 258 bits (130), Expect = 4e-65 Identities = 331/398 (83%) Strand = Plus / Minus Query: 613 ctaaatttggattgctttgctttggtagatttgccatcgcaacgaggccactgaatggat 672 ||||||||| |||| |||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 527 ctaaatttgaattgttttgctttggaggattagccatcgcaacaaggccaccgaatggat 468 Query: 673 cgccaaacagattggatagtccaacgtgagaaggaggggtagaatactgaggctgttgct 732 | ||||| ||||||||| |||| | ||||||||| | | ||||||||| | ||| |||| Sbjct: 467 caccaaatggattggataatccatcatgagaaggaagagcagaatactgtgtctgctgct 408 Query: 733 gtttctggtatgtttgcggtggcgtcatcactgtttgctgttgttgctgtacctgaaagt 792 | | |||||||||||||| ||| | |||| ||||||| |||||||| | |||| | | Sbjct: 407 gctgatggtatgtttgcggcggcaacgtcaccatttgctgctgttgctgaatctgataat 348 Query: 793 actgttgctgccgcacctggtaatactgctgctgctgtgccatcatggctaactgcacat 852 |||| |||||| || |||| |||||||| ||||||||| ||||||||||||||| |||| Sbjct: 347 actgctgctgctgctcctgataatactgatgctgctgttgcatcatggctaactgaacat 288 Query: 853 tcgatcgtggcgcgaagccattggacatggcaaatggatcgttagggtcaaatgtgttcg 912 |||| ||||||||||| ||| ||||| |||||||||||||| || ||||||| ||| Sbjct: 287 tcgacggtggcgcgaagttattagacattgcaaatggatcgttgggatcaaatgggtttc 228 Query: 913 cggcgaggctgttggtgtagatcacaccggctatttgctgcctccttgcctcatcttcat 972 | || | |||| | ||||| | ||| ||||||||||||||||||||| |||||||||| Sbjct: 227 ctgcaacgctgccgttgtaggttgcactggctatttgctgcctccttgcttcatcttcat 168 Query: 973 ataggctgtctagcaatagcttgtcaaaccccccagcc 1010 | ||||||||||||| |||||||||||| || |||||| Sbjct: 167 acaggctgtctagcagtagcttgtcaaatcctccagcc 130 >emb|CT831516.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA202K17, full insert sequence Length = 2517 Score = 258 bits (130), Expect = 4e-65 Identities = 331/398 (83%) Strand = Plus / Minus Query: 613 ctaaatttggattgctttgctttggtagatttgccatcgcaacgaggccactgaatggat 672 ||||||||| |||| |||||||||| |||| ||||||||||| ||||||| |||||||| Sbjct: 2325 ctaaatttgaattgttttgctttggaggattagccatcgcaacaaggccaccgaatggat 2266 Query: 673 cgccaaacagattggatagtccaacgtgagaaggaggggtagaatactgaggctgttgct 732 | ||||| ||||||||| |||| | ||||||||| | | ||||||||| | ||| |||| Sbjct: 2265 caccaaatggattggataatccatcatgagaaggaagagcagaatactgtgtctgctgct 2206 Query: 733 gtttctggtatgtttgcggtggcgtcatcactgtttgctgttgttgctgtacctgaaagt 792 | | |||||||||||||| ||| | |||| ||||||| |||||||| | |||| | | Sbjct: 2205 gctgatggtatgtttgcggcggcaacgtcaccatttgctgctgttgctgaatctgataat 2146 Query: 793 actgttgctgccgcacctggtaatactgctgctgctgtgccatcatggctaactgcacat 852 |||| |||||| || |||| |||||||| ||||||||| ||||||||||||||| |||| Sbjct: 2145 actgctgctgctgctcctgataatactgatgctgctgttgcatcatggctaactgaacat 2086 Query: 853 tcgatcgtggcgcgaagccattggacatggcaaatggatcgttagggtcaaatgtgttcg 912 |||| ||||||||||| ||| ||||| |||||||||||||| || ||||||| ||| Sbjct: 2085 tcgacggtggcgcgaagttattagacattgcaaatggatcgttgggatcaaatgggtttc 2026 Query: 913 cggcgaggctgttggtgtagatcacaccggctatttgctgcctccttgcctcatcttcat 972 | || | |||| | ||||| | ||| ||||||||||||||||||||| |||||||||| Sbjct: 2025 ctgcaacgctgccgttgtaggttgcactggctatttgctgcctccttgcttcatcttcat 1966 Query: 973 ataggctgtctagcaatagcttgtcaaaccccccagcc 1010 | ||||||||||||| |||||||||||| || |||||| Sbjct: 1965 acaggctgtctagcagtagcttgtcaaatcctccagcc 1928