BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem102f15 (1003 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY106355.1| Zea mays PCO138189 mRNA sequence 492 e-135 ref|NM_001059680.1| Oryza sativa (japonica cultivar-group) Os04g... 432 e-117 dbj|AK100492.1| Oryza sativa (japonica cultivar-group) cDNA clon... 432 e-117 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 246 1e-61 emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4,... 246 1e-61 >gb|AY106355.1| Zea mays PCO138189 mRNA sequence Length = 1078 Score = 492 bits (248), Expect = e-135 Identities = 398/448 (88%) Strand = Plus / Plus Query: 314 gaccagatctacgtcttcttcccgaacgaggcgaagcccggcgtgaagacgatcaggagc 373 |||||||||||||| ||||| || || ||||| |||||||| |||||||| ||||||| | Sbjct: 333 gaccagatctacgtgttctttcctaatgaggcaaagcccggggtgaagacaatcaggaac 392 Query: 374 tacgtcgagaagatgaagcaggagaacgtcaccagcagcatactcgtcgtgcagcaggcg 433 |||||||||||||||||| | ||||||||| | | ||||||||||||||||||||||| Sbjct: 393 tacgtcgagaagatgaagaacgagaacgtcttcgccggcatactcgtcgtgcagcaggcg 452 Query: 434 ctcagcgccttcgcccgcagcgccgtgcaggaggtctcccagaagtaccacctcgaggtc 493 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 453 ctcagcgccttcgcacgcagcgccgttcaggaggtctcccagaagtaccacctcgaggtc 512 Query: 494 ttccaggaatcggagcttcttgtcaacattaaggagcacgtcctagtgccagagcacgag 553 ||||||||| | ||||||||||||||||||||||| || ||||||||||||||||| | | Sbjct: 513 ttccaggaagctgagcttcttgtcaacattaaggaccatgtcctagtgccagagcatgtg 572 Query: 554 ctcctgacacctgagcagaagaagacgctgctggagcgatacaccgtgaaagaaacccag 613 ||||||||||| || | |||||||| || || ||||| ||||||||||| ||||||||| Sbjct: 573 ctcctgacaccggaagacaagaagactcttctagagcggtacaccgtgaaggaaacccag 632 Query: 614 ctccctcgaattcagattactgacccgatagcaagatactacggcatgaagcgtgggcag 673 || || || ||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 633 ctgccccggattcagattacagacccgatagcaagatactatgggatgaagcgtgggcag 692 Query: 674 gttgtgaagatcatccgagccagtgagactgctggaagatacgtgacctatcgctatgtt 733 || |||||||||| |||||||||||||||||||||||||| | ||||| ||||| ||| Sbjct: 693 gtcgtgaagatcacaagagccagtgagactgctggaagatacatcacctaccgctacgtt 752 Query: 734 gtctgaacttcactacattctcatggct 761 |||||| || |||||||||||||||| Sbjct: 753 gtctgagttttgctacattctcatggct 780 >ref|NM_001059680.1| Oryza sativa (japonica cultivar-group) Os04g0487300 (Os04g0487300) mRNA, complete cds Length = 2656 Score = 432 bits (218), Expect = e-117 Identities = 419/486 (86%) Strand = Plus / Plus Query: 121 gatggcgtcggaggaggagatgagccgcctgttccgcatccggcgcacggtgatgcagat 180 |||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||| Sbjct: 82 gatggcgtcggaggaggagacgagccggcttttccgcatccgccgcacggtgatgcagat 141 Query: 181 gctgcgcgaccgcgggtacctggtggtggacggcgacatcaacctgtccaagcgcgagtt 240 |||||| ||| | || ||||| ||| ||| |||||| |||| | | | |||| || Sbjct: 142 gctgcgggacaggggctacctcgtgacggagttggacatcgacctcccgaggggcgactt 201 Query: 241 catcgagcgctacggtgaacccgtccgccgcgacgacctcgtcatcaaccgcgtcaagaa 300 | ||| |||| ||| || |||||| ||||||| | |||||| ||| |||| |||||| Sbjct: 202 cgtcgcacgcttcggggatcccgtcgaccgcgaccatctcgtcttcagccgccacaagaa 261 Query: 301 ggccgaccccgccgaccagatctacgtcttcttcccgaacgaggcgaagcccggcgtgaa 360 || | || ||||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 262 ggacaacggcgccgaccagatctacgtcttcttccccaaggacgcgaagcccggggtgaa 321 Query: 361 gacgatcaggagctacgtcgagaagatgaagcaggagaacgtcaccagcagcatactcgt 420 |||||||||||||||||| |||| |||||||||||||| ||| || | |||| ||||| Sbjct: 322 gacgatcaggagctacgtggagaggatgaagcaggagagcgtgttcaacggcatcctcgt 381 Query: 421 cgtgcagcaggcgctcagcgccttcgcccgcagcgccgtgcaggaggtctcccagaagta 480 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382 cgtgcagcaggcgctcagcgcgttcgcccgcagcgccgtgcaggaggtctcccagaagtt 441 Query: 481 ccacctcgaggtcttccaggaatcggagcttcttgtcaacattaaggagcacgtcctagt 540 |||||||||||||||||||||| |||| || ||||| ||||||||||| || ||| || Sbjct: 442 ccacctcgaggtcttccaggaagcggaactgcttgtgaacattaaggatcatacccttgt 501 Query: 541 gccagagcacgagctcctgacacctgagcagaagaagacgctgctggagcgatacaccgt 600 ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 502 gccagagcacgagctcctgacgcctgagcagaagaagacgctgctggagcggtataccgt 561 Query: 601 gaaaga 606 |||||| Sbjct: 562 gaaaga 567 Score = 139 bits (70), Expect = 2e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 611 cagctccctcgaattcagattactgacccgatagcaagatactacggcatgaagcgtggg 670 |||||||| || ||||| ||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 2207 cagctcccccggattcaaattacggacccaatagcaagatattacggcatgaagcgtggg 2266 Query: 671 caggttgtgaagatcatccgagccagtgagactgctggaagatacgtgacctatcgctat 730 || ||||| ||||||||||| || |||||||| ||||||||||| ||||| || || ||| Sbjct: 2267 caagttgtaaagatcatccgtgctagtgagaccgctggaagatatgtgacgtaccgttat 2326 Query: 731 gttgtctgaacttcactacatt 752 || || ||| |||||||||||| Sbjct: 2327 gtggtgtgatcttcactacatt 2348 >dbj|AK100492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098I05, full insert sequence Length = 2658 Score = 432 bits (218), Expect = e-117 Identities = 419/486 (86%) Strand = Plus / Plus Query: 121 gatggcgtcggaggaggagatgagccgcctgttccgcatccggcgcacggtgatgcagat 180 |||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||| Sbjct: 84 gatggcgtcggaggaggagacgagccggcttttccgcatccgccgcacggtgatgcagat 143 Query: 181 gctgcgcgaccgcgggtacctggtggtggacggcgacatcaacctgtccaagcgcgagtt 240 |||||| ||| | || ||||| ||| ||| |||||| |||| | | | |||| || Sbjct: 144 gctgcgggacaggggctacctcgtgacggagttggacatcgacctcccgaggggcgactt 203 Query: 241 catcgagcgctacggtgaacccgtccgccgcgacgacctcgtcatcaaccgcgtcaagaa 300 | ||| |||| ||| || |||||| ||||||| | |||||| ||| |||| |||||| Sbjct: 204 cgtcgcacgcttcggggatcccgtcgaccgcgaccatctcgtcttcagccgccacaagaa 263 Query: 301 ggccgaccccgccgaccagatctacgtcttcttcccgaacgaggcgaagcccggcgtgaa 360 || | || ||||||||||||||||||||||||||| || || ||||||||||| ||||| Sbjct: 264 ggacaacggcgccgaccagatctacgtcttcttccccaaggacgcgaagcccggggtgaa 323 Query: 361 gacgatcaggagctacgtcgagaagatgaagcaggagaacgtcaccagcagcatactcgt 420 |||||||||||||||||| |||| |||||||||||||| ||| || | |||| ||||| Sbjct: 324 gacgatcaggagctacgtggagaggatgaagcaggagagcgtgttcaacggcatcctcgt 383 Query: 421 cgtgcagcaggcgctcagcgccttcgcccgcagcgccgtgcaggaggtctcccagaagta 480 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 384 cgtgcagcaggcgctcagcgcgttcgcccgcagcgccgtgcaggaggtctcccagaagtt 443 Query: 481 ccacctcgaggtcttccaggaatcggagcttcttgtcaacattaaggagcacgtcctagt 540 |||||||||||||||||||||| |||| || ||||| ||||||||||| || ||| || Sbjct: 444 ccacctcgaggtcttccaggaagcggaactgcttgtgaacattaaggatcatacccttgt 503 Query: 541 gccagagcacgagctcctgacacctgagcagaagaagacgctgctggagcgatacaccgt 600 ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||| Sbjct: 504 gccagagcacgagctcctgacgcctgagcagaagaagacgctgctggagcggtataccgt 563 Query: 601 gaaaga 606 |||||| Sbjct: 564 gaaaga 569 Score = 139 bits (70), Expect = 2e-29 Identities = 124/142 (87%) Strand = Plus / Plus Query: 611 cagctccctcgaattcagattactgacccgatagcaagatactacggcatgaagcgtggg 670 |||||||| || ||||| ||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 2209 cagctcccccggattcaaattacggacccaatagcaagatattacggcatgaagcgtggg 2268 Query: 671 caggttgtgaagatcatccgagccagtgagactgctggaagatacgtgacctatcgctat 730 || ||||| ||||||||||| || |||||||| ||||||||||| ||||| || || ||| Sbjct: 2269 caagttgtaaagatcatccgtgctagtgagaccgctggaagatatgtgacgtaccgttat 2328 Query: 731 gttgtctgaacttcactacatt 752 || || ||| |||||||||||| Sbjct: 2329 gtggtgtgatcttcactacatt 2350 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 246 bits (124), Expect = 1e-61 Identities = 169/184 (91%) Strand = Plus / Minus Query: 317 cagatctacgtcttcttcccgaacgaggcgaagcccggcgtgaagacgatcaggagctac 376 |||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 24330179 cagatctacgtcttcttccccaaggacgcgaagcccggggtgaagacgatcaggagctac 24330120 Query: 377 gtcgagaagatgaagcaggagaacgtcaccagcagcatactcgtcgtgcagcaggcgctc 436 || |||| |||||||||||||| ||| || | |||| ||||||||||||||||||||| Sbjct: 24330119 gtggagaggatgaagcaggagagcgtgttcaacggcatcctcgtcgtgcagcaggcgctc 24330060 Query: 437 agcgccttcgcccgcagcgccgtgcaggaggtctcccagaagtaccacctcgaggtcttc 496 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 24330059 agcgcgttcgcccgcagcgccgtgcaggaggtctcccagaagttccacctcgaggtcttc 24330000 Query: 497 cagg 500 |||| Sbjct: 24329999 cagg 24329996 Score = 139 bits (70), Expect = 2e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 611 cagctccctcgaattcagattactgacccgatagcaagatactacggcatgaagcgtggg 670 |||||||| || ||||| ||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 24328147 cagctcccccggattcaaattacggacccaatagcaagatattacggcatgaagcgtggg 24328088 Query: 671 caggttgtgaagatcatccgagccagtgagactgctggaagatacgtgacctatcgctat 730 || ||||| ||||||||||| || |||||||| ||||||||||| ||||| || || ||| Sbjct: 24328087 caagttgtaaagatcatccgtgctagtgagaccgctggaagatatgtgacgtaccgttat 24328028 Query: 731 gttgtctgaacttcactacatt 752 || || ||| |||||||||||| Sbjct: 24328027 gtggtgtgatcttcactacatt 24328006 Score = 123 bits (62), Expect = 1e-24 Identities = 98/110 (89%) Strand = Plus / Minus Query: 497 caggaatcggagcttcttgtcaacattaaggagcacgtcctagtgccagagcacgagctc 556 |||||| |||| || ||||| ||||||||||| || ||| |||||||||||||||||| Sbjct: 24329896 caggaagcggaactgcttgtgaacattaaggatcatacccttgtgccagagcacgagctc 24329837 Query: 557 ctgacacctgagcagaagaagacgctgctggagcgatacaccgtgaaaga 606 ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 24329836 ctgacgcctgagcagaagaagacgctgctggagcggtataccgtgaaaga 24329787 Score = 99.6 bits (50), Expect = 2e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 121 gatggcgtcggaggaggagatgagccgcctgttccgcatccggcgcacggtgatgcagat 180 |||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||| Sbjct: 24330511 gatggcgtcggaggaggagacgagccggcttttccgcatccgccgcacggtgatgcagat 24330452 Query: 181 gctgcg 186 |||||| Sbjct: 24330451 gctgcg 24330446 >emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 246 bits (124), Expect = 1e-61 Identities = 169/184 (91%) Strand = Plus / Minus Query: 317 cagatctacgtcttcttcccgaacgaggcgaagcccggcgtgaagacgatcaggagctac 376 |||||||||||||||||||| || || ||||||||||| ||||||||||||||||||||| Sbjct: 46590 cagatctacgtcttcttccccaaggacgcgaagcccggggtgaagacgatcaggagctac 46531 Query: 377 gtcgagaagatgaagcaggagaacgtcaccagcagcatactcgtcgtgcagcaggcgctc 436 || |||| |||||||||||||| ||| || | |||| ||||||||||||||||||||| Sbjct: 46530 gtggagaggatgaagcaggagagcgtgttcaacggcatcctcgtcgtgcagcaggcgctc 46471 Query: 437 agcgccttcgcccgcagcgccgtgcaggaggtctcccagaagtaccacctcgaggtcttc 496 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 46470 agcgcgttcgcccgcagcgccgtgcaggaggtctcccagaagttccacctcgaggtcttc 46411 Query: 497 cagg 500 |||| Sbjct: 46410 cagg 46407 Score = 139 bits (70), Expect = 2e-29 Identities = 124/142 (87%) Strand = Plus / Minus Query: 611 cagctccctcgaattcagattactgacccgatagcaagatactacggcatgaagcgtggg 670 |||||||| || ||||| ||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 44558 cagctcccccggattcaaattacggacccaatagcaagatattacggcatgaagcgtggg 44499 Query: 671 caggttgtgaagatcatccgagccagtgagactgctggaagatacgtgacctatcgctat 730 || ||||| ||||||||||| || |||||||| ||||||||||| ||||| || || ||| Sbjct: 44498 caagttgtaaagatcatccgtgctagtgagaccgctggaagatatgtgacgtaccgttat 44439 Query: 731 gttgtctgaacttcactacatt 752 || || ||| |||||||||||| Sbjct: 44438 gtggtgtgatcttcactacatt 44417 Score = 123 bits (62), Expect = 1e-24 Identities = 98/110 (89%) Strand = Plus / Minus Query: 497 caggaatcggagcttcttgtcaacattaaggagcacgtcctagtgccagagcacgagctc 556 |||||| |||| || ||||| ||||||||||| || ||| |||||||||||||||||| Sbjct: 46307 caggaagcggaactgcttgtgaacattaaggatcatacccttgtgccagagcacgagctc 46248 Query: 557 ctgacacctgagcagaagaagacgctgctggagcgatacaccgtgaaaga 606 ||||| ||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 46247 ctgacgcctgagcagaagaagacgctgctggagcggtataccgtgaaaga 46198 Score = 99.6 bits (50), Expect = 2e-17 Identities = 62/66 (93%) Strand = Plus / Minus Query: 121 gatggcgtcggaggaggagatgagccgcctgttccgcatccggcgcacggtgatgcagat 180 |||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||| Sbjct: 46922 gatggcgtcggaggaggagacgagccggcttttccgcatccgccgcacggtgatgcagat 46863 Query: 181 gctgcg 186 |||||| Sbjct: 46862 gctgcg 46857