BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem102f08 (1279 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048776.1| Oryza sativa (japonica cultivar-group) Os01g... 638 e-179 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 248 5e-62 dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic D... 248 5e-62 gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence 226 2e-55 >ref|NM_001048776.1| Oryza sativa (japonica cultivar-group) Os01g0185500 (Os01g0185500) mRNA, complete cds Length = 843 Score = 638 bits (322), Expect = e-179 Identities = 609/704 (86%), Gaps = 3/704 (0%) Strand = Plus / Plus Query: 207 ccgccgtgcagcggctcttcgatgcgtgccgcgaggtattctccggccctggcgccggtg 266 |||| |||||| |||||||||| |||||||||||||| ||| | | | |||||| | Sbjct: 143 ccgcggtgcaggggctcttcgaggcgtgccgcgaggtcttcggtgcctc---cgccggcg 199 Query: 267 cggtgcctctgccggccggggtcgagaggatcaagtccgttcttgatagtattacagcag 326 ||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||| | Sbjct: 200 cggtgccctcgcccgccggggtcgagaggatcaagtccgttcttgatagcatttcagcgg 259 Query: 327 cagatgtcggtctaactcggaacatgtcatattttcgacgtgttgactcctgtggcactc 386 |||||||| | |||||||| |||||||||||||| || |||||| | ||| ||||| || Sbjct: 260 cagatgtcagcctaactcgaaacatgtcatatttccggcgtgttaattccaatggcattc 319 Query: 387 ctataatcacttacttgcacctttatgagtgcgaggctttctcaattggcatcttttgtt 446 ||| |||||||||||| |||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 320 ctaaaatcacttacttacacctttatgagtgtgaggctttctcgatcggcatcttttgtt 379 Query: 447 tgccttcaaggggtgtcattcctctccataatcaccctggtatgactgtgttcagcaagc 506 ||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 380 tgcctccaaggggtgtcattcctctccataatcaccccaacatgactgtgttcagtaagc 439 Query: 507 ttctctttggtgccatgtatgtgaagtcctacgactgggctgatgtcccacaacatacaa 566 |||| ||||||| || |||||||||||| || |||||||||| | ||||| || ||| Sbjct: 440 ttctttttggtgagctgcgtgtgaagtcctatgattgggctgatgcctcacaagattcaa 499 Query: 567 ctgatgttcaattgcaaggacaccatttggcaaaggtgaaagctgatggcatcttgactg 626 |||||| ||| ||||||||| || || ||||||||||| | |||||||| ||||| || Sbjct: 500 ctgatgctcagttgcaaggagcccgcttagcaaaggtgaaggttgatggcaccttgaatg 559 Query: 627 caccttgtgaaacatcggtactatatccagaagatggtggaaacatgcattgctttaccg 686 ||||||||| |||||||||||||||||| ||||||||||| ||| |||| ||||| |||| Sbjct: 560 caccttgtgcaacatcggtactatatccggaagatggtggcaacctgcactgcttcaccg 619 Query: 687 cacagtctgcttgtgcggtgcttgatgtccttggcccaccatatgacgatggcagtggga 746 |||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 620 cacatactgcttgtgctgttcttgatgtccttggcccaccatatgacgatggcagtggga 679 Query: 747 ggcactgccagcactacaatgtctcttgctctgctccttctgttggagattcaaggtcat 806 ||||||||||||||||||| ||||||| |||||| ||||||| ||||||||||| | | Sbjct: 680 ggcactgccagcactacaacgtctcttcctctgcaccttctgctggagattcaaagcccc 739 Query: 807 tttctggaggtgacggatatgcatggctggaggagagtgaaccaccagaagatttttatc 866 || |||||| || ||||| ||||||||||||||| ||||||||||||| ||||| ||| Sbjct: 740 ttcctggagacgatggatacgcatggctggaggagtgtgaaccaccagacaattttcatc 799 Query: 867 ttgtcaggtcaacatatatgggtccaagaattctggaccattga 910 ||||| ||||||| |||||||||||||||||| ||||| ||||| Sbjct: 800 ttgtcgggtcaacttatatgggtccaagaattgtggacaattga 843 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 248 bits (125), Expect = 5e-62 Identities = 176/193 (91%) Strand = Plus / Plus Query: 596 gcaaaggtgaaagctgatggcatcttgactgcaccttgtgaaacatcggtactatatcca 655 ||||||||||| | |||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 4543983 gcaaaggtgaaggttgatggcaccttgaatgcaccttgtgcaacatcggtactatatccg 4544042 Query: 656 gaagatggtggaaacatgcattgctttaccgcacagtctgcttgtgcggtgcttgatgtc 715 ||||||||||| ||| |||| ||||| |||||||| |||||||||| || ||||||||| Sbjct: 4544043 gaagatggtggcaacctgcactgcttcaccgcacatactgcttgtgctgttcttgatgtc 4544102 Query: 716 cttggcccaccatatgacgatggcagtgggaggcactgccagcactacaatgtctcttgc 775 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 4544103 cttggcccaccatatgacgatggcagtgggaggcactgccagcactacaacgtctcttcc 4544162 Query: 776 tctgctccttctg 788 ||||| ||||||| Sbjct: 4544163 tctgcaccttctg 4544175 Score = 147 bits (74), Expect = 1e-31 Identities = 145/166 (87%), Gaps = 7/166 (4%) Strand = Plus / Plus Query: 821 ggatatgcatggctggaggagagtgaaccaccagaagatttttatcttgtcaggtcaaca 880 ||||| ||||||||||||||| ||||||||||||| ||||| |||||||| ||||||| Sbjct: 4545123 ggatacgcatggctggaggagtgtgaaccaccagacaattttcatcttgtcgggtcaact 4545182 Query: 881 tatatgggtccaagaattctggaccattgaactcctatgcttgaggatgccttggtttct 940 |||||||||||||||||| ||||| |||||||| || |||||| ||||||||||| Sbjct: 4545183 tatatgggtccaagaattgtggacaattgaact--ta----cgaggattccttggtttct 4545236 Query: 941 tgcagcacatgatgtaacttt-gtttggtgtaaatacattgctgga 985 |||||| |||||||||||||| |||||||||||||||| |||||| Sbjct: 4545237 tgcagcgcatgatgtaactttcatttggtgtaaatacatcgctgga 4545282 Score = 127 bits (64), Expect = 1e-25 Identities = 118/136 (86%) Strand = Plus / Plus Query: 434 ggcatcttttgtttgccttcaaggggtgtcattcctctccataatcaccctggtatgact 493 |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 4543731 ggcatcttttgtttgcctccaaggggtgtcattcctctccataatcaccccaacatgact 4543790 Query: 494 gtgttcagcaagcttctctttggtgccatgtatgtgaagtcctacgactgggctgatgtc 553 |||||||| |||||||| ||||||| || |||||||||||| || |||||||||| | Sbjct: 4543791 gtgttcagtaagcttctttttggtgagctgcgtgtgaagtcctatgattgggctgatgcc 4543850 Query: 554 ccacaacatacaactg 569 ||||| || |||||| Sbjct: 4543851 tcacaagattcaactg 4543866 Score = 109 bits (55), Expect = 3e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 311 gatagtattacagcagcagatgtcggtctaactcggaacatgtcatattttcgacgtgtt 370 ||||| ||| |||| ||||||||| | |||||||| |||||||||||||| || |||||| Sbjct: 4543502 gatagcatttcagcggcagatgtcagcctaactcgaaacatgtcatatttccggcgtgtt 4543561 Query: 371 gactcctgtggcactcctataatcacttacttgcacctttatgagtgcgaggctttctc 429 | ||| ||||| ||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 4543562 aattccaatggcattcctaaaatcacttacttacacctttatgagtgtgaggctttctc 4543620 >dbj|AP002486.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F03 Length = 149699 Score = 248 bits (125), Expect = 5e-62 Identities = 176/193 (91%) Strand = Plus / Plus Query: 596 gcaaaggtgaaagctgatggcatcttgactgcaccttgtgaaacatcggtactatatcca 655 ||||||||||| | |||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct: 78670 gcaaaggtgaaggttgatggcaccttgaatgcaccttgtgcaacatcggtactatatccg 78729 Query: 656 gaagatggtggaaacatgcattgctttaccgcacagtctgcttgtgcggtgcttgatgtc 715 ||||||||||| ||| |||| ||||| |||||||| |||||||||| || ||||||||| Sbjct: 78730 gaagatggtggcaacctgcactgcttcaccgcacatactgcttgtgctgttcttgatgtc 78789 Query: 716 cttggcccaccatatgacgatggcagtgggaggcactgccagcactacaatgtctcttgc 775 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 78790 cttggcccaccatatgacgatggcagtgggaggcactgccagcactacaacgtctcttcc 78849 Query: 776 tctgctccttctg 788 ||||| ||||||| Sbjct: 78850 tctgcaccttctg 78862 Score = 147 bits (74), Expect = 1e-31 Identities = 145/166 (87%), Gaps = 7/166 (4%) Strand = Plus / Plus Query: 821 ggatatgcatggctggaggagagtgaaccaccagaagatttttatcttgtcaggtcaaca 880 ||||| ||||||||||||||| ||||||||||||| ||||| |||||||| ||||||| Sbjct: 79810 ggatacgcatggctggaggagtgtgaaccaccagacaattttcatcttgtcgggtcaact 79869 Query: 881 tatatgggtccaagaattctggaccattgaactcctatgcttgaggatgccttggtttct 940 |||||||||||||||||| ||||| |||||||| || |||||| ||||||||||| Sbjct: 79870 tatatgggtccaagaattgtggacaattgaact--ta----cgaggattccttggtttct 79923 Query: 941 tgcagcacatgatgtaacttt-gtttggtgtaaatacattgctgga 985 |||||| |||||||||||||| |||||||||||||||| |||||| Sbjct: 79924 tgcagcgcatgatgtaactttcatttggtgtaaatacatcgctgga 79969 Score = 127 bits (64), Expect = 1e-25 Identities = 118/136 (86%) Strand = Plus / Plus Query: 434 ggcatcttttgtttgccttcaaggggtgtcattcctctccataatcaccctggtatgact 493 |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 78418 ggcatcttttgtttgcctccaaggggtgtcattcctctccataatcaccccaacatgact 78477 Query: 494 gtgttcagcaagcttctctttggtgccatgtatgtgaagtcctacgactgggctgatgtc 553 |||||||| |||||||| ||||||| || |||||||||||| || |||||||||| | Sbjct: 78478 gtgttcagtaagcttctttttggtgagctgcgtgtgaagtcctatgattgggctgatgcc 78537 Query: 554 ccacaacatacaactg 569 ||||| || |||||| Sbjct: 78538 tcacaagattcaactg 78553 Score = 109 bits (55), Expect = 3e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 311 gatagtattacagcagcagatgtcggtctaactcggaacatgtcatattttcgacgtgtt 370 ||||| ||| |||| ||||||||| | |||||||| |||||||||||||| || |||||| Sbjct: 78189 gatagcatttcagcggcagatgtcagcctaactcgaaacatgtcatatttccggcgtgtt 78248 Query: 371 gactcctgtggcactcctataatcacttacttgcacctttatgagtgcgaggctttctc 429 | ||| ||||| ||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 78249 aattccaatggcattcctaaaatcacttacttacacctttatgagtgtgaggctttctc 78307 >gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 226 bits (114), Expect = 2e-55 Identities = 162/178 (91%) Strand = Plus / Minus Query: 592 tttggcaaaggtgaaagctgatggcatcttgactgcaccttgtgaaacatcggtactata 651 ||||||||||||||| | |||||||||||||||||||||| |||||| |||||||||| Sbjct: 77503 tttggcaaaggtgaaggttgatggcatcttgactgcacctcatgaaacggcggtactata 77444 Query: 652 tccagaagatggtggaaacatgcattgctttaccgcacagtctgcttgtgcggtgcttga 711 ||||||||||||||| || ||||||||||||||||||||| ||||||||| |||||||| Sbjct: 77443 tccagaagatggtggtaatatgcattgctttaccgcacagaatgcttgtgcagtgcttga 77384 Query: 712 tgtccttggcccaccatatgacgatggcagtgggaggcactgccagcactacaatgtc 769 |||||||||||| |||||||| |||||||| || |||||||||||| ||||||||||| Sbjct: 77383 tgtccttggccctccatatgatgatggcagcggaaggcactgccagtactacaatgtc 77326 Score = 133 bits (67), Expect = 2e-27 Identities = 103/115 (89%) Strand = Plus / Minus Query: 434 ggcatcttttgtttgccttcaaggggtgtcattcctctccataatcaccctggtatgact 493 ||||||||||||||||| || |||||||||||||||||||| ||||||||||| |||||| Sbjct: 77759 ggcatcttttgtttgccatcgaggggtgtcattcctctccacaatcaccctggcatgact 77700 Query: 494 gtgttcagcaagcttctctttggtgccatgtatgtgaagtcctacgactgggctg 548 ||||||||||||||| | |||||||||||| || | || || || |||||||||| Sbjct: 77699 gtgttcagcaagcttttgtttggtgccatgcatataaaatcttatgactgggctg 77645 Score = 103 bits (52), Expect = 2e-18 Identities = 117/138 (84%), Gaps = 3/138 (2%) Strand = Plus / Minus Query: 175 ggcggcggcgcccccggcgatggccgcgccggcc---gccgtgcagcggctcttcgatgc 231 ||||||||| |||| ||||||||||||| ||| |||||||||||||||||||| || Sbjct: 79494 ggcggcggcaccccgaacgatggccgcgcccgccaccgccgtgcagcggctcttcgaggc 79435 Query: 232 gtgccgcgaggtattctccggccctggcgccggtgcggtgcctctgccggccggggtcga 291 |||||||||||| ||| |||| |||| | || ||||| || | ||||||||| ||||| Sbjct: 79434 gtgccgcgaggtcttcaccggagctggtccaggcgcggttccaccgccggccggcgtcga 79375 Query: 292 gaggatcaagtccgttct 309 |||||||||||||||||| Sbjct: 79374 gaggatcaagtccgttct 79357 Score = 93.7 bits (47), Expect = 2e-15 Identities = 101/119 (84%) Strand = Plus / Minus Query: 311 gatagtattacagcagcagatgtcggtctaactcggaacatgtcatattttcgacgtgtt 370 |||||||| |||||||||||||| ||||||| | |||| ||||||| ||||||||| Sbjct: 77980 gatagtatcacagcagcagatgttcgtctaacatccagcatgccatatttccgacgtgtt 77921 Query: 371 gactcctgtggcactcctataatcacttacttgcacctttatgagtgcgaggctttctc 429 ||| ||| |||||||| | |||||||||||||||||| || |||||||||||||||| Sbjct: 77920 gacccctacggcactccaaaaatcacttacttgcacctatacaagtgcgaggctttctc 77862 Score = 91.7 bits (46), Expect = 7e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 810 ctggaggtgacggatatgcatggctggaggagagtgaaccaccagaagatttttatcttg 869 ||||||||||| |||||| ||||||||||||||| || ||| | |||||||||||||| Sbjct: 76772 ctggaggtgacagatatgaatggctggaggagagcgagccatctcgagatttttatcttg 76713 Query: 870 tcaggtcaacatatatgggtccaagaattctggaccattgaactcctatgcttg 923 | | |||||||||||||| || | |||| ||||||| |||||| ||||||||| Sbjct: 76712 ttggatcaacatatatgggcccgaaaattttggaccactgaacttctatgcttg 76659