BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem102d23 (1145 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK240969.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 204 6e-49 ref|NM_001057873.1| Oryza sativa (japonica cultivar-group) Os03g... 182 2e-42 gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genom... 113 2e-21 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 113 2e-21 gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosom... 109 3e-20 >dbj|AK240969.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065046P10, full insert sequence Length = 1566 Score = 204 bits (103), Expect = 6e-49 Identities = 226/267 (84%) Strand = Plus / Plus Query: 756 caaattacttcgagatcgatattgatgtgcattggttcagcttcatatcgcggaaagggc 815 |||| ||||||||||||||| | ||||| || | ||||||||||| || ||||||||| Sbjct: 1136 caaactacttcgagatcgatctcgatgtccaccgtttcagcttcatttcaaggaaagggc 1195 Query: 816 tctaggccttccgagaatgactgaaacatggagttcttgatcttggcctaaccattcagg 875 | |||||||| | ||| || |||||||||||||||||||||||||||| |||||||||| Sbjct: 1196 ttgaggccttcagggaacgattgaaacatggagttcttgatcttggcctgaccattcagg 1255 Query: 876 cacaaaaggctgaggagctacatgagcatgtgttgcgctgcatgaggctgaacaagatcg 935 |||| ||||| |||||||||| ||||||||| ||| |||||||||||||||| ||||||| Sbjct: 1256 cacagaaggcagaggagctacctgagcatgtcttgtgctgcatgaggctgaataagatcg 1315 Query: 936 attttaccaacaacgtgcaaatactgacgctggtaacatccagtgatgaataaatctgtc 995 | ||| || ||| || |||||||| || || ||| |||||||| |||||||| | | Sbjct: 1316 actttgccgacagcgggcaaataccaacattgataatgtccagtgacgaataaattttta 1375 Query: 996 atgtcactgaaatgtactaattttgag 1022 ||||||||||||| |||||| |||||| Sbjct: 1376 atgtcactgaaatttactaactttgag 1402 Score = 127 bits (64), Expect = 1e-25 Identities = 127/148 (85%) Strand = Plus / Plus Query: 511 tgcctacctatcgtgctaccatgtttggcgagaacgacggtgatggaataagcctagttc 570 |||||||||||| || ||| ||||||||||||||||||| ||||| ||||||||||||| Sbjct: 812 tgcctacctatccagcaaccgtgtttggcgagaacgacggcgatgggataagcctagttc 871 Query: 571 tgtatttcatgatatctgacgatttcgacaaggagatttctcctcaattgaaggacagca 630 | ||||||| | |||||||| ||| |||||||| |||||||||||| | || || |||| Sbjct: 872 tttatttcaagctatctgacagttttgacaaggaaatttctcctcaactaaaagaaagca 931 Query: 631 tcaagatgcttatgaatgaggaaatgga 658 |||||| ||||||| ||| |||||||| Sbjct: 932 tcaagaagcttatgggtgatgaaatgga 959 >ref|NM_001057873.1| Oryza sativa (japonica cultivar-group) Os03g0759000 (Os03g0759000) mRNA, complete cds Length = 1584 Score = 182 bits (92), Expect = 2e-42 Identities = 176/204 (86%) Strand = Plus / Plus Query: 756 caaattacttcgagatcgatattgatgtgcattggttcagcttcatatcgcggaaagggc 815 |||| ||||||||||||||| | ||||| || | ||||||||||| || ||||||||| Sbjct: 1352 caaactacttcgagatcgatctcgatgtccaccgtttcagcttcatttcaaggaaagggc 1411 Query: 816 tctaggccttccgagaatgactgaaacatggagttcttgatcttggcctaaccattcagg 875 | |||||||| | ||| || |||||||||||||||||||||||||||| |||||||||| Sbjct: 1412 ttgaggccttcagggaacgattgaaacatggagttcttgatcttggcctgaccattcagg 1471 Query: 876 cacaaaaggctgaggagctacatgagcatgtgttgcgctgcatgaggctgaacaagatcg 935 |||| ||||| |||||||||| ||||||||| ||| |||||||||||||||| ||||||| Sbjct: 1472 cacagaaggcagaggagctacctgagcatgtcttgtgctgcatgaggctgaataagatcg 1531 Query: 936 attttaccaacaacgtgcaaatac 959 | ||| || ||| || |||||||| Sbjct: 1532 actttgccgacagcgggcaaatac 1555 Score = 127 bits (64), Expect = 1e-25 Identities = 127/148 (85%) Strand = Plus / Plus Query: 511 tgcctacctatcgtgctaccatgtttggcgagaacgacggtgatggaataagcctagttc 570 |||||||||||| || ||| ||||||||||||||||||| ||||| ||||||||||||| Sbjct: 1028 tgcctacctatccagcaaccgtgtttggcgagaacgacggcgatgggataagcctagttc 1087 Query: 571 tgtatttcatgatatctgacgatttcgacaaggagatttctcctcaattgaaggacagca 630 | ||||||| | |||||||| ||| |||||||| |||||||||||| | || || |||| Sbjct: 1088 tttatttcaagctatctgacagttttgacaaggaaatttctcctcaactaaaagaaagca 1147 Query: 631 tcaagatgcttatgaatgaggaaatgga 658 |||||| ||||||| ||| |||||||| Sbjct: 1148 tcaagaagcttatgggtgatgaaatgga 1175 >gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 113 bits (57), Expect = 2e-21 Identities = 108/125 (86%) Strand = Plus / Minus Query: 511 tgcctacctatcgtgctaccatgtttggcgagaacgacggtgatggaataagcctagttc 570 |||||||||||| || ||| ||||||||||||||||||| ||||| ||||||||||||| Sbjct: 17047 tgcctacctatccagcaaccgtgtttggcgagaacgacggcgatgggataagcctagttc 16988 Query: 571 tgtatttcatgatatctgacgatttcgacaaggagatttctcctcaattgaaggacagca 630 | ||||||| | |||||||| ||| |||||||| |||||||||||| | || || |||| Sbjct: 16987 tttatttcaagctatctgacagttttgacaaggaaatttctcctcaactaaaagaaagca 16928 Query: 631 tcaag 635 ||||| Sbjct: 16927 tcaag 16923 Score = 109 bits (55), Expect = 3e-20 Identities = 127/151 (84%) Strand = Plus / Minus Query: 872 caggcacaaaaggctgaggagctacatgagcatgtgttgcgctgcatgaggctgaacaag 931 |||||||| ||||| |||||||||| ||||||||| ||| |||||||||||||||| ||| Sbjct: 16310 caggcacagaaggcagaggagctacctgagcatgtcttgtgctgcatgaggctgaataag 16251 Query: 932 atcgattttaccaacaacgtgcaaatactgacgctggtaacatccagtgatgaataaatc 991 ||||| ||| || ||| || |||||||| || || ||| |||||||| |||||||| Sbjct: 16250 atcgactttgccgacagcgggcaaataccaacattgataatgtccagtgacgaataaatt 16191 Query: 992 tgtcatgtcactgaaatgtactaattttgag 1022 | | ||||||||||||| |||||| |||||| Sbjct: 16190 tttaatgtcactgaaatttactaactttgag 16160 Score = 103 bits (52), Expect = 2e-18 Identities = 103/120 (85%) Strand = Plus / Minus Query: 756 caaattacttcgagatcgatattgatgtgcattggttcagcttcatatcgcggaaagggc 815 |||| ||||||||||||||| | ||||| || | ||||||||||| || ||||||||| Sbjct: 16510 caaactacttcgagatcgatctcgatgtccaccgtttcagcttcatttcaaggaaagggc 16451 Query: 816 tctaggccttccgagaatgactgaaacatggagttcttgatcttggcctaaccattcagg 875 | |||||||| | ||| || |||||||||||||||||||||||||||| |||||||||| Sbjct: 16450 ttgaggccttcagggaacgattgaaacatggagttcttgatcttggcctgaccattcagg 16391 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 113 bits (57), Expect = 2e-21 Identities = 108/125 (86%) Strand = Plus / Minus Query: 511 tgcctacctatcgtgctaccatgtttggcgagaacgacggtgatggaataagcctagttc 570 |||||||||||| || ||| ||||||||||||||||||| ||||| ||||||||||||| Sbjct: 31186929 tgcctacctatccagcaaccgtgtttggcgagaacgacggcgatgggataagcctagttc 31186870 Query: 571 tgtatttcatgatatctgacgatttcgacaaggagatttctcctcaattgaaggacagca 630 | ||||||| | |||||||| ||| |||||||| |||||||||||| | || || |||| Sbjct: 31186869 tttatttcaagctatctgacagttttgacaaggaaatttctcctcaactaaaagaaagca 31186810 Query: 631 tcaag 635 ||||| Sbjct: 31186809 tcaag 31186805 Score = 109 bits (55), Expect = 3e-20 Identities = 127/151 (84%) Strand = Plus / Minus Query: 872 caggcacaaaaggctgaggagctacatgagcatgtgttgcgctgcatgaggctgaacaag 931 |||||||| ||||| |||||||||| ||||||||| ||| |||||||||||||||| ||| Sbjct: 31186192 caggcacagaaggcagaggagctacctgagcatgtcttgtgctgcatgaggctgaataag 31186133 Query: 932 atcgattttaccaacaacgtgcaaatactgacgctggtaacatccagtgatgaataaatc 991 ||||| ||| || ||| || |||||||| || || ||| |||||||| |||||||| Sbjct: 31186132 atcgactttgccgacagcgggcaaataccaacattgataatgtccagtgacgaataaatt 31186073 Query: 992 tgtcatgtcactgaaatgtactaattttgag 1022 | | ||||||||||||| |||||| |||||| Sbjct: 31186072 tttaatgtcactgaaatttactaactttgag 31186042 Score = 103 bits (52), Expect = 2e-18 Identities = 103/120 (85%) Strand = Plus / Minus Query: 756 caaattacttcgagatcgatattgatgtgcattggttcagcttcatatcgcggaaagggc 815 |||| ||||||||||||||| | ||||| || | ||||||||||| || ||||||||| Sbjct: 31186392 caaactacttcgagatcgatctcgatgtccaccgtttcagcttcatttcaaggaaagggc 31186333 Query: 816 tctaggccttccgagaatgactgaaacatggagttcttgatcttggcctaaccattcagg 875 | |||||||| | ||| || |||||||||||||||||||||||||||| |||||||||| Sbjct: 31186332 ttgaggccttcagggaacgattgaaacatggagttcttgatcttggcctgaccattcagg 31186273 >gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 109 bits (55), Expect = 3e-20 Identities = 127/151 (84%) Strand = Plus / Plus Query: 872 caggcacaaaaggctgaggagctacatgagcatgtgttgcgctgcatgaggctgaacaag 931 |||||||| ||||| |||||||||| ||||||||| ||| |||||||||||||||| ||| Sbjct: 395 caggcacagaaggcagaggagctacctgagcatgtcttgtgctgcatgaggctgaataag 454 Query: 932 atcgattttaccaacaacgtgcaaatactgacgctggtaacatccagtgatgaataaatc 991 ||||| ||| || ||| || |||||||| || || ||| |||||||| |||||||| Sbjct: 455 atcgactttgccgacagcgggcaaataccaacattgataatgtccagtgacgaataaatt 514 Query: 992 tgtcatgtcactgaaatgtactaattttgag 1022 | | ||||||||||||| |||||| |||||| Sbjct: 515 tttaatgtcactgaaatttactaactttgag 545 Score = 103 bits (52), Expect = 2e-18 Identities = 103/120 (85%) Strand = Plus / Plus Query: 756 caaattacttcgagatcgatattgatgtgcattggttcagcttcatatcgcggaaagggc 815 |||| ||||||||||||||| | ||||| || | ||||||||||| || ||||||||| Sbjct: 195 caaactacttcgagatcgatctcgatgtccaccgtttcagcttcatttcaaggaaagggc 254 Query: 816 tctaggccttccgagaatgactgaaacatggagttcttgatcttggcctaaccattcagg 875 | |||||||| | ||| || |||||||||||||||||||||||||||| |||||||||| Sbjct: 255 ttgaggccttcagggaacgattgaaacatggagttcttgatcttggcctgaccattcagg 314