BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem102d13 (1059 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK242123.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 410 e-111 ref|NM_001060788.1| Oryza sativa (japonica cultivar-group) Os04g... 410 e-111 emb|AM183298.1| Oryza sativa (japonica cultivar-group) chloropla... 402 e-108 gb|DQ244386.1| Zea mays clone 6780 mRNA sequence 323 8e-85 gb|AY111386.1| Zea mays CL49128_1 mRNA sequence 287 5e-74 >dbj|AK242123.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075147L14, full insert sequence Length = 3705 Score = 410 bits (207), Expect = e-111 Identities = 310/343 (90%), Gaps = 1/343 (0%) Strand = Plus / Plus Query: 434 cgcgcgtgttcggtgcggcgcggcggtgaagttcatcaggcagagcgagttcgaggcgga 493 |||||| || ||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 3093 cgcgcgcgtgcggtgtggcgcggcggtgaggttcatcgggcagagcgagttcgaggcgga 3152 Query: 494 ggtgttgcagtcggagctgcccgtgctcgtcgacttcgtcgccgactggtgtgggccgtg 553 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3153 ggtgttgcagtcggacctgcccgtgctcgtcgacttcgtcgccgactggtgcgggccgtg 3212 Query: 554 ccgcctcatcgcgcccgtcgtcgattgggcctctga-gaatatgaagggagattaaagat 612 |||||||||||||||||||||||| |||||| | || ||||||||||||||||||||||| Sbjct: 3213 ccgcctcatcgcgcccgtcgtcgactgggccgccgaggaatatgaagggagattaaagat 3272 Query: 613 tgtcaagatcgatcatgatgcaaatcctcaattgatcgaagaatataaggtttatggtct 672 ||||||||| ||||||||||| ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 3273 tgtcaagattgatcatgatgccaatcctcaactgattgaagagtataaggtttatggtct 3332 Query: 673 ctcggctctgattctcttcaagaatgggctggaggtgcctgggagccgaagagaaggtgc 732 | | |||| ||||| |||||| ||||| ||||| || |||||| |||||||||| || Sbjct: 3333 cccatctcttattctattcaaggatgggaaagaggtaccagggagcagaagagaaggcgc 3392 Query: 733 aataataaaagacaagttcaaggaatacctcaaacctctcttg 775 ||| | ||||| ||||||||||||||||||| ||||||||||| Sbjct: 3393 aattacaaaagccaagttcaaggaatacctcgaacctctcttg 3435 >ref|NM_001060788.1| Oryza sativa (japonica cultivar-group) Os04g0676100 (Os04g0676100) mRNA, complete cds Length = 543 Score = 410 bits (207), Expect = e-111 Identities = 310/343 (90%), Gaps = 1/343 (0%) Strand = Plus / Plus Query: 434 cgcgcgtgttcggtgcggcgcggcggtgaagttcatcaggcagagcgagttcgaggcgga 493 |||||| || ||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 180 cgcgcgcgtgcggtgtggcgcggcggtgaggttcatcgggcagagcgagttcgaggcgga 239 Query: 494 ggtgttgcagtcggagctgcccgtgctcgtcgacttcgtcgccgactggtgtgggccgtg 553 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 240 ggtgttgcagtcggacctgcccgtgctcgtcgacttcgtcgccgactggtgcgggccgtg 299 Query: 554 ccgcctcatcgcgcccgtcgtcgattgggcctctga-gaatatgaagggagattaaagat 612 |||||||||||||||||||||||| |||||| | || ||||||||||||||||||||||| Sbjct: 300 ccgcctcatcgcgcccgtcgtcgactgggccgccgaggaatatgaagggagattaaagat 359 Query: 613 tgtcaagatcgatcatgatgcaaatcctcaattgatcgaagaatataaggtttatggtct 672 ||||||||| ||||||||||| ||||||||| |||| ||||| ||||||||||||||||| Sbjct: 360 tgtcaagattgatcatgatgccaatcctcaactgattgaagagtataaggtttatggtct 419 Query: 673 ctcggctctgattctcttcaagaatgggctggaggtgcctgggagccgaagagaaggtgc 732 | | |||| ||||| |||||| ||||| ||||| || |||||| |||||||||| || Sbjct: 420 cccatctcttattctattcaaggatgggaaagaggtaccagggagcagaagagaaggcgc 479 Query: 733 aataataaaagacaagttcaaggaatacctcaaacctctcttg 775 ||| | ||||| ||||||||||||||||||| ||||||||||| Sbjct: 480 aattacaaaagccaagttcaaggaatacctcgaacctctcttg 522 >emb|AM183298.1| Oryza sativa (japonica cultivar-group) chloroplast partial mRNA for thioredoxin x (trx-x gene) Length = 348 Score = 402 bits (203), Expect = e-108 Identities = 297/327 (90%), Gaps = 1/327 (0%) Strand = Plus / Plus Query: 450 ggcgcggcggtgaagttcatcaggcagagcgagttcgaggcggaggtgttgcagtcggag 509 ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggcgcggcggtgaggttcatcgggcagagcgagttcgaggcggaggtgttgcagtcggac 60 Query: 510 ctgcccgtgctcgtcgacttcgtcgccgactggtgtgggccgtgccgcctcatcgcgccc 569 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 61 ctgcccgtgctcgtcgacttcgtcgccgactggtgcgggccgtgccgcctcatcgcgccc 120 Query: 570 gtcgtcgattgggcctctga-gaatatgaagggagattaaagattgtcaagatcgatcat 628 |||||||| |||||| | || |||||||||||||||||||||||||||||||| |||||| Sbjct: 121 gtcgtcgactgggccgccgaggaatatgaagggagattaaagattgtcaagattgatcat 180 Query: 629 gatgcaaatcctcaattgatcgaagaatataaggtttatggtctctcggctctgattctc 688 ||||| ||||||||| |||| ||||| |||||||||||||||||| | |||| ||||| Sbjct: 181 gatgccaatcctcaactgattgaagagtataaggtttatggtctcccatctcttattcta 240 Query: 689 ttcaagaatgggctggaggtgcctgggagccgaagagaaggtgcaataataaaagacaag 748 |||||| ||||| ||||| || |||||| |||||||||| ||||| | ||||| |||| Sbjct: 241 ttcaaggatgggaaagaggtaccagggagcagaagagaaggcgcaattacaaaagccaag 300 Query: 749 ttcaaggaatacctcaaacctctcttg 775 ||||||||||||||| ||||||||||| Sbjct: 301 ttcaaggaatacctcgaacctctcttg 327 >gb|DQ244386.1| Zea mays clone 6780 mRNA sequence Length = 848 Score = 323 bits (163), Expect = 8e-85 Identities = 296/339 (87%), Gaps = 1/339 (0%) Strand = Plus / Plus Query: 434 cgcgcgtgttcggtgcggcgcggcggtgaagttcatcaggcagagcgagttcgaggcgga 493 |||||| ||||||||||||||||||| | |||||| |||| |||||||| ||||| Sbjct: 240 cgcgcgcgttcggtgcggcgcggcggccaggttcattgggcaaggcgagttccccgcgga 299 Query: 494 ggtgttgcagtcggagctgcccgtgctcgtcgacttcgtcgccgactggtgtgggccgtg 553 |||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 300 ggtgctggagtcggagctgcccgtgctcgtggacttcgtcgccgactggtgcgggccgtg 359 Query: 554 ccgcctcatcgcgcccgtcgtcgattgggcctctga-gaatatgaagggagattaaagat 612 ||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||| || Sbjct: 360 ccgcctcatcgcgcccgtcgtcgattgggcctccgaggaatatgctgggcgattaaaaat 419 Query: 613 tgtcaagatcgatcatgatgcaaatcctcaattgatcgaagaatataaggtttatggtct 672 ||||||||| ||||||||||| ||||| || |||| ||||| || |||||||||||||| Sbjct: 420 tgtcaagattgatcatgatgccaatccacagctgattgaagagtacaaggtttatggtct 479 Query: 673 ctcggctctgattctcttcaagaatgggctggaggtgcctgggagccgaagagaaggtgc 732 | || || |||||||||||||| |||| | |||||||| || |||||| ||||||| || Sbjct: 480 cccgactttgattctcttcaaggatggccaagaggtgccaggcagccgacgagaaggggc 539 Query: 733 aataataaaagacaagttcaaggaatacctcaaacctct 771 ||| |||||||||||||||||||||||||| ||||||| Sbjct: 540 aatgataaaagacaagttcaaggaatacctggaacctct 578 >gb|AY111386.1| Zea mays CL49128_1 mRNA sequence Length = 842 Score = 287 bits (145), Expect = 5e-74 Identities = 284/331 (85%), Gaps = 1/331 (0%) Strand = Plus / Minus Query: 442 ttcggtgcggcgcggcggtgaagttcatcaggcagagcgagttcgaggcggaggtgttgc 501 |||||||||| ||||||| | |||||| |||| |||||||| ||||||||| || Sbjct: 669 ttcggtgcggngcggcggccaggttcattgggcaaggcgagttccccgcggaggtgctgg 610 Query: 502 agtcggagctgcccgtgctcgtcgacttcgtcgccgactggtgtgggccgtgccgcctca 561 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 609 agtcggagctgcccgtgctcgtggacttcgtcgccgactggtgcgggccgtgccgcctca 550 Query: 562 tcgcgcccgtcgtcgattgggcctctga-gaatatgaagggagattaaagattgtcaaga 620 ||||||||||||||||||||||||| || ||||||| ||| |||| ||||||||| Sbjct: 549 tcgcgcccgtcgtcgattgggcctccgaggaatatgctgggcgattnnnnnttgtcaaga 490 Query: 621 tcgatcatgatgcaaatcctcaattgatcgaagaatataaggtttatggtctctcggctc 680 | ||||||||||| ||||| || |||| ||||| || ||||||||||||||| || || Sbjct: 489 ttgatcatgatgccaatccacagctgattgaagagtacaaggtttatggtctcccgactt 430 Query: 681 tgattctcttcaagaatgggctggaggtgcctgggagccgaagagaaggtgcaataataa 740 |||||||||||||| |||| | |||||||| || |||||| ||||||| ||||| |||| Sbjct: 429 tgattctcttcaaggatggccaagaggtgccaggcagccgacgagaaggggcaatgataa 370 Query: 741 aagacaagttcaaggaatacctcaaacctct 771 |||||||||||||||||||||| ||||||| Sbjct: 369 aagacaagttcaaggaatacctggaacctct 339