BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem102b10 (1112 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060636.1| Oryza sativa (japonica cultivar-group) Os04g... 718 0.0 dbj|AK106059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 716 0.0 dbj|AB028448.1| Hordeum vulgare Bnuc1 mRNA for nuclease I, compl... 349 2e-92 emb|AJ311603.1|HVU311603 Hordeum vulgare mRNA for putative nucle... 325 2e-85 dbj|D83178.1| Hordeum vulgare mRNA for endonuclease, complete cds 307 5e-80 >ref|NM_001060636.1| Oryza sativa (japonica cultivar-group) Os04g0652700 (Os04g0652700) mRNA, complete cds Length = 1146 Score = 718 bits (362), Expect = 0.0 Identities = 674/778 (86%) Strand = Plus / Plus Query: 136 tggggcaaggagggccactacatggtgtgcaagatcgcggagagtttcctgacgagcgag 195 |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| Sbjct: 105 tggggcaaggagggccactacatggtgtgcaagatcgccgagggtttcctgacgaaggag 164 Query: 196 gcctcgacggcggtgaagggcctcttgccggggtgggccggcggcgacctcgcggagacg 255 || ||||||||||||||| ||| | || ||||||||||||||||| |||||||| ||| Sbjct: 165 gcggcgacggcggtgaaggagctcctccccgggtgggccggcggcgagctcgcggaaacg 224 Query: 256 tgctcgtgggcggacacacagcgcttccggtaccggtggtcgagccccctgcacttcgcc 315 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||| Sbjct: 225 tgctcgtgggcggacaccgagcggttccggtaccggtggtcgagccccctccacttcgcc 284 Query: 316 gacacgccgggagactgcaagttcagctacgcccgggactgccacgatacgaaaggagag 375 ||||| || || |||||| |||||| |||||||||||| |||||| | || || || ||| Sbjct: 285 gacacccccggcgactgccagttcaactacgcccgggattgccacaacacaaacggtgag 344 Query: 376 aaggatcggtgcgttgttggagcaatcaacaactacactgccgcgctagaagactcatca 435 ||||| ||| || || ||||| |||||||||||||| |||||| || ||||||||| Sbjct: 345 aaggacatgtgtgtggtcggagcgatcaacaactacaccaacgcgctcgaggactcatca 404 Query: 436 agcccatatgatccgaccgagagcctgatgttcctggcgcacttcgtcggcgacgtccac 495 || ||||||||||| ||||||||| |||||||| |||| ||||||||||||||||| ||| Sbjct: 405 agtccatatgatccaaccgagagcttgatgttcttggcacacttcgtcggcgacgttcac 464 Query: 496 cagcctctccactgcggccataccgccgatctgggcggcaacaccatcgttgtccactgg 555 |||||||||||||||||||| | ||||| || |||||||||||| | ||||| ||| Sbjct: 465 cagcctctccactgcggccacgtcaaagatcttggtggcaacaccatcatcgtccattgg 524 Query: 556 tacagaaggaagaccaaccttcaccatgtatgggatgtgaacatcatcgaaacagccatg 615 |||| |||||||| ||||||||| || || |||||||||||| |||| ||||| ||| || Sbjct: 525 tacacaaggaagagcaaccttcatcacgtgtgggatgtgaacgtcattgaaacggccttg 584 Query: 616 aaggacttctacaacgacgacctaagcacgatgatagaggccatcaagctgaacattact 675 ||||| ||||||||||| ||| | |||||||||||| ||||||||||| ||||||| ||| Sbjct: 585 aaggaattctacaacgaggacgtgagcacgatgataaaggccatcaagatgaacatcact 644 Query: 676 gaggagtggtccaatgaagagaagcagtgggagacatgccgtagccgaacaaagacttgt 735 || |||||||||| || ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 645 gatgagtggtccaccgaggagaagcagtgggagacttgccgtagccggacaaagacttgt 704 Query: 736 gctgacacatacgcgcaggagagtgcagaactggcttgcaacgcgtacgcgggtgttgag 795 || || | ||||| ||||||||||| | || || ||||| ||||||| |||||||||| Sbjct: 705 gccgataagtacgccgaggagagtgcaaagctcgcgtgcaaagcgtacgagggtgttgag 764 Query: 796 caagactccaccttagaagatgactatttcttctctgcgctgccggttgtcgataagaga 855 ||||| ||||||||||||||||||||||||||| |||| ||||| ||||| | ||||| Sbjct: 765 caagaatccaccttagaagatgactatttcttcgctgccctgcctgttgttcagaagagg 824 Query: 856 attgctcaaggaggtgtaaggcttgctgcgatactcaaccggatcttcagtgggaaca 913 ||||||||||| || || ||||||||||| |||||||||||||||||||| ||||||| Sbjct: 825 attgctcaaggtggcgtgaggcttgctgcaatactcaaccggatcttcagcgggaaca 882 >dbj|AK106059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F11, full insert sequence Length = 1146 Score = 716 bits (361), Expect = 0.0 Identities = 694/805 (86%) Strand = Plus / Plus Query: 109 atggcaagagctcctacgacccaagcatggggcaaggagggccactacatggtgtgcaag 168 ||||| ||||| || ||| |||| || ||||||||||||||||||||||||||||||||| Sbjct: 78 atggcgagagcccccacggcccacgcgtggggcaaggagggccactacatggtgtgcaag 137 Query: 169 atcgcggagagtttcctgacgagcgaggcctcgacggcggtgaagggcctcttgccgggg 228 ||||| ||| |||||||||||| ||||| ||||||||||||||| ||| | || ||| Sbjct: 138 atcgccgagggtttcctgacgaaggaggcggcgacggcggtgaaggagctcctccccggg 197 Query: 229 tgggccggcggcgacctcgcggagacgtgctcgtgggcggacacacagcgcttccggtac 288 |||||||||||||| |||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 198 tgggccggcggcgagctcgcggaaacgtgctcgtgggcggacaccgagcggttccggtac 257 Query: 289 cggtggtcgagccccctgcacttcgccgacacgccgggagactgcaagttcagctacgcc 348 ||||||||||||||||| |||||||||||||| || || |||||| |||||| ||||||| Sbjct: 258 cggtggtcgagccccctccacttcgccgacacccccggcgactgccagttcaactacgcc 317 Query: 349 cgggactgccacgatacgaaaggagagaaggatcggtgcgttgttggagcaatcaacaac 408 ||||| |||||| | || || || |||||||| ||| || || ||||| ||||||||| Sbjct: 318 cgggattgccacaacacaaacggtgagaaggacatgtgtgtggtcggagcgatcaacaac 377 Query: 409 tacactgccgcgctagaagactcatcaagcccatatgatccgaccgagagcctgatgttc 468 ||||| |||||| || ||||||||||| ||||||||||| ||||||||| |||||||| Sbjct: 378 tacaccaacgcgctcgaggactcatcaagtccatatgatccaaccgagagcttgatgttc 437 Query: 469 ctggcgcacttcgtcggcgacgtccaccagcctctccactgcggccataccgccgatctg 528 |||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| Sbjct: 438 ttggcacacttcgtcggcgacgttcaccagcctctccactgcggccacgtcaaagatctt 497 Query: 529 ggcggcaacaccatcgttgtccactggtacagaaggaagaccaaccttcaccatgtatgg 588 || |||||||||||| | ||||| ||||||| |||||||| ||||||||| || || ||| Sbjct: 498 ggtggcaacaccatcatcgtccattggtacacaaggaagagcaaccttcatcacgtgtgg 557 Query: 589 gatgtgaacatcatcgaaacagccatgaaggacttctacaacgacgacctaagcacgatg 648 ||||||||| |||| ||||| ||| ||||||| ||||||||||| ||| | ||||||||| Sbjct: 558 gatgtgaacgtcattgaaacggccttgaaggaattctacaacgaggacgtgagcacgatg 617 Query: 649 atagaggccatcaagctgaacattactgaggagtggtccaatgaagagaagcagtgggag 708 ||| ||||||||||| ||||||| ||||| |||||||||| || ||||||||||||||| Sbjct: 618 ataaaggccatcaagatgaacatcactgatgagtggtccaccgaggagaagcagtgggag 677 Query: 709 acatgccgtagccgaacaaagacttgtgctgacacatacgcgcaggagagtgcagaactg 768 || ||||||||||| |||||||||||||| || | ||||| ||||||||||| | || Sbjct: 678 acttgccgtagccggacaaagacttgtgccgataagtacgccgaggagagtgcaaagctc 737 Query: 769 gcttgcaacgcgtacgcgggtgttgagcaagactccaccttagaagatgactatttcttc 828 || ||||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 738 gcgtgcaaagcgtatgagggtgttgagcaagaatccaccttagaagatgactatttcttc 797 Query: 829 tctgcgctgccggttgtcgataagagaattgctcaaggaggtgtaaggcttgctgcgata 888 |||| ||||| ||||| | ||||| ||||||||||| || || ||||||||||| ||| Sbjct: 798 gctgccctgcctgttgttcagaagaggattgctcaaggtggcgtgaggcttgctgcaata 857 Query: 889 ctcaaccggatcttcagtgggaaca 913 ||||||||||||||||| ||||||| Sbjct: 858 ctcaaccggatcttcagcgggaaca 882 >dbj|AB028448.1| Hordeum vulgare Bnuc1 mRNA for nuclease I, complete cds Length = 1283 Score = 349 bits (176), Expect = 2e-92 Identities = 386/456 (84%) Strand = Plus / Plus Query: 136 tggggcaaggagggccactacatggtgtgcaagatcgcggagagtttcctgacgagcgag 195 |||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 152 tggggcaaggaggggcactacatgacctgcaagatcgccgatggtttcctgacgagcgag 211 Query: 196 gcctcgacggcggtgaagggcctcttgccggggtgggccggcggcgacctcgcggagacg 255 || ||| |||||||||||| |||| ||||| ||||||| |||||| ||||||||| | Sbjct: 212 gcatcggcggcggtgaaggacctcctgccgtcgtgggccaacggcgagctcgcggaggtg 271 Query: 256 tgctcgtgggcggacacacagcgcttccggtaccggtggtcgagccccctgcacttcgcc 315 ||| |||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 272 tgcgcgtgggcggacaggcagcgcttccggtaccggtggtcaagtcccctgcacttcgcc 331 Query: 316 gacacgccgggagactgcaagttcagctacgcccgggactgccacgatacgaaaggagag 375 ||||| || || |||||||| |||||||||||| ||||||||||||| || || || | Sbjct: 332 gacacccccggtgactgcaacttcagctacgccagggactgccacgacaccaaggggaac 391 Query: 376 aaggatcggtgcgttgttggagcaatcaacaactacactgccgcgctagaagactcatca 435 ||||| |||||| || ||||| |||||||||||||| |||||||| || ||| | || Sbjct: 392 aaggacgtgtgcgtggtgggagccatcaacaactacaccgccgcgctcgaggacccgtcc 451 Query: 436 agcccatatgatccgaccgagagcctgatgttcctggcgcacttcgtcggcgacgtccac 495 ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 452 agcccgtatgacccgacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcac 511 Query: 496 cagcctctccactgcggccataccgccgatctgggcggcaacaccatcgttgtccactgg 555 ||||| || ||||||||||| || ||| || ||||||||||||||| ||| ||| Sbjct: 512 cagccactgcactgcggccacgtcgacgacctcggcggcaacaccatcaaactccgatgg 571 Query: 556 tacagaaggaagaccaaccttcaccatgtatgggat 591 ||||| ||||||| |||||| ||||| || |||||| Sbjct: 572 tacaggaggaagagcaacctgcaccacgtgtgggat 607 Score = 77.8 bits (39), Expect = 9e-11 Identities = 134/165 (81%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 766 ctggcttgcaacgcgtacgcgggtgttgagcaagactccaccttagaagatgactatttc 825 ||||| ||| ||||||||| ||| || ||||||| | |||||||| ||| ||||||| | Sbjct: 785 ctggcctgcgacgcgtacgagggcgtcgagcaaggcgacaccttaggagacgactattac 844 Query: 826 ttctctgcgctgccggttgtcgataagagaattgctcaaggaggtgtaaggcttgctgcg 885 ||| ||| ||||||||||||| ||||| || ||||| ||||| || ||||| || | | Sbjct: 845 ttccgggcgttgccggttgtcgagaagaggatagctcagggaggcgtgaggctggcggtg 904 Query: 886 atactcaaccggatcttcagtgg---gaacagcaggctgcagagc 927 || || |||| |||||||||||| ||| ||||||||||||||| Sbjct: 905 atccttaaccagatcttcagtgggaagaatagcaggctgcagagc 949 >emb|AJ311603.1|HVU311603 Hordeum vulgare mRNA for putative nuclease (bnuc2 gene) Length = 1139 Score = 325 bits (164), Expect = 2e-85 Identities = 623/776 (80%) Strand = Plus / Plus Query: 136 tggggcaaggagggccactacatggtgtgcaagatcgcggagagtttcctgacgagcgag 195 |||||||||||||| ||||||||| ||||||||||| || |||||||||||| ||| Sbjct: 131 tggggcaaggaggggcactacatgacctgcaagatcgccgatggtttcctgacgaaggag 190 Query: 196 gcctcgacggcggtgaagggcctcttgccggggtgggccggcggcgacctcgcggagacg 255 || ||| ||| |||||||| ||| | ||| || |||| |||||| ||||||||| | Sbjct: 191 gcgtcggcgggggtgaaggatctcctcccgtcgtcggccaacggcgagctcgcggaggtg 250 Query: 256 tgctcgtgggcggacacacagcgcttccggtaccggtggtcgagccccctgcacttcgcc 315 |||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 251 tgctcgtgggcggatagccagcgcttccggtaccggtggtcgagcccgctgcacttcgct 310 Query: 316 gacacgccgggagactgcaagttcagctacgcccgggactgccacgatacgaaaggagag 375 ||||| || |||||||||||||||||||||||||||||||||||| || || || | Sbjct: 311 gacaccccaaaagactgcaagttcagctacgcccgggactgccacgacaccaaggggaac 370 Query: 376 aaggatcggtgcgttgttggagcaatcaacaactacactgccgcgctagaagactcatca 435 ||||| |||||| || || || || ||||||||||| ||||| || | ||| |||| Sbjct: 371 aaggacgcgtgcgtggtcggggccattaacaactacaccgccgccctgcaggacccatct 430 Query: 436 agcccatatgatccgaccgagagcctgatgttcctggcgcacttcgtcggcgacgtccac 495 | || ||| ||| ||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 431 aatccgtataatcggacggagagcctgatgttcctggcccacttcgtcggcgacgtgcac 490 Query: 496 cagcctctccactgcggccataccgccgatctgggcggcaacaccatcgttgtccactgg 555 ||||| || |||||||||| | || || ||||||||||||||| | |||| |||| Sbjct: 491 cagccgctgcactgcggccgcgtggaagacctcggcggcaacaccatcctcgtccgctgg 550 Query: 556 tacagaaggaagaccaaccttcaccatgtatgggatgtgaacatcatcgaaacagccatg 615 ||||| ||||||| |||||| ||||| || ||||| ||| || ||||||| |||||| Sbjct: 551 tacaggaggaagagcaacctgcaccacgtgtgggacgtggacgtcatcgagcaggccatg 610 Query: 616 aaggacttctacaacgacgacctaagcacgatgatagaggccatcaagctgaacattact 675 |||||||| ||| | |||| ||| ||||| |||||||| ||| ||||| || Sbjct: 611 aaggacttgtacggcagagaccaggacaccatgatcaaggccatccagcgtaacatcacc 670 Query: 676 gaggagtggtccaatgaagagaagcagtgggagacatgccgtagccgaacaaagacttgt 735 ||||| ||||||| || ||||||||||||||| | ||||| ||| |||| ||||| || Sbjct: 671 gaggactggtccagcgaggagaagcagtgggaggcgtgccgcagcagaaccaagacctgc 730 Query: 736 gctgacacatacgcgcaggagagtgcagaactggcttgcaacgcgtacgcgggtgttgag 795 ||||||| ||||| |||||||||||| ||||| ||| |||||||| ||| || || Sbjct: 731 gctgacaagtacgctgaggagagtgcagtgctggcctgcgacgcgtacaagggcgtcaag 790 Query: 796 caagactccaccttagaagatgactatttcttctctgcgctgccggttgtcgataagaga 855 || ||||||||||||| |||||| || | |||| ||||||||||| || | ||| | Sbjct: 791 caggactccaccttaggagatgagtactacttcaaggcgctgccggtcgttcagaagcgg 850 Query: 856 attgctcaaggaggtgtaaggcttgctgcgatactcaaccggatcttcagtgggaa 911 || ||||| || || || ||||| || ||||| ||||||||||||||||| ||||| Sbjct: 851 atcgctcagggcggcgtcaggctggcggcgatcctcaaccggatcttcagcgggaa 906 >dbj|D83178.1| Hordeum vulgare mRNA for endonuclease, complete cds Length = 1180 Score = 307 bits (155), Expect = 5e-80 Identities = 380/455 (83%) Strand = Plus / Plus Query: 136 tggggcaaggagggccactacatggtgtgcaagatcgcggagagtttcctgacgagcgag 195 |||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 124 tggggcaaggagggccactacatgacctgcaagatcgccgacggtttcctgacgagcgag 183 Query: 196 gcctcgacggcggtgaagggcctcttgccggggtgggccggcggcgacctcgcggagacg 255 || | ||||| |||||||| ||| | ||| ||||||| |||||| ||||||||| | Sbjct: 184 gcgttgacgggggtgaaggcgctcctcccgtcgtgggccaacggcgagctcgcggaggtg 243 Query: 256 tgctcgtgggcggacacacagcgcttccggtaccggtggtcgagccccctgcacttcgcc 315 |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 244 tgctcgtgggcggacagccagcgcttccggtaccggtggtcccgctccctgcacttcgcc 303 Query: 316 gacacgccgggagactgcaagttcagctacgcccgggactgccacgatacgaaaggagag 375 ||||| || || ||||||||||||||||||||| ||||||||||||| || || || | Sbjct: 304 gacacccccggcgactgcaagttcagctacgccagggactgccacgacaccaaggggaac 363 Query: 376 aaggatcggtgcgttgttggagcaatcaacaactacactgccgcgctagaagactcatca 435 ||| | |||||| || || || |||||||||||||| |||||||| | ||||| || Sbjct: 364 aagaacgtgtgcgtggtcggggccatcaacaactacaccgccgcgctccaggactcgtcc 423 Query: 436 agcccatatgatccgaccgagagcctgatgttcctggcgcacttcgtcggcgacgtccac 495 ||||||| | | ||||| ||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 424 agcccatttaacccgacggagagcctgatgttcctggcgcacttcgtgggcgacgtgcac 483 Query: 496 cagcctctccactgcggccataccgccgatctgggcggcaacaccatcgttgtccactgg 555 ||||| | ||||||||||| || ||| || ||||||||||||||| ||| ||| Sbjct: 484 cagccgatgcactgcggccacgtcgacgacctcggcggcaacaccatcaaactccgatgg 543 Query: 556 tacagaaggaagaccaaccttcaccatgtatggga 590 ||||| ||||||| |||||| ||||| || ||||| Sbjct: 544 tacaggaggaagagcaacctgcaccacgtgtggga 578