BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem102a15 (1063 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058627.1| Oryza sativa (japonica cultivar-group) Os04g... 545 e-151 dbj|AK070089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 545 e-151 gb|DQ245792.1| Zea mays clone 20366 mRNA sequence 274 7e-70 emb|CR855030.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 246 2e-61 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 246 2e-61 >ref|NM_001058627.1| Oryza sativa (japonica cultivar-group) Os04g0129600 (Os04g0129600) mRNA, partial cds Length = 1107 Score = 545 bits (275), Expect = e-151 Identities = 389/427 (91%) Strand = Plus / Plus Query: 152 ggccgatgagggcgctggggcgtgggcccgtcgcgcggcggcgctctcgctgctggggct 211 |||||| | |||||| |||| ||||| ||||||||||| |||||||||||| |||||||| Sbjct: 157 ggccgacgcgggcgcgggggagtgggtccgtcgcgcgggggcgctctcgcttctggggct 216 Query: 212 caccggcgccgtcgccgccagcgccgtcagcgacctctccgtattcctctcgtgctccag 271 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 217 caccggcgccgtcgccgccagcgccgtcagcgacctctccgtcttcctctcctgctccag 276 Query: 272 gcaatagagaaggccacccagagccagcaaattgtgaatgcaatcggcaagccgattgtc 331 || |||||||||||| |||||| ||||||||| |||||||| |||||| ||| || || Sbjct: 277 gcgatagagaaggcctcccagaaccagcaaatagtgaatgcgatcggcgcgcccatcgtg 336 Query: 332 cggggtccctggtacagcgcttccattgccgtgaatcacgcgaggcattccgtctcctgc 391 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 337 cggggtccctggtacagcgcttccatcgccgtgaatcacgcgaggcattccgtctcctgc 396 Query: 392 actttccccgtgtcggggccccaaggagatgggcttcttaagttcaaggctgttcgcttg 451 |||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||| | Sbjct: 397 actttccccgtgtcggcgcctcaaggaaatgggcttctcaagttcaaggctgttcgctcg 456 Query: 452 ggagatgaatcttggttttcgtttctacagcacagtaactgggagatactccttatggat 511 |||||||| || |||||||| ||||| |||| || | ||||||| |||||||| |||||| Sbjct: 457 ggagatgagtcgtggttttcatttctgcagcccaatgactgggaaatactcctaatggat 516 Query: 512 gctatccttgatgtttctactgacgacgggaaacaccaaacaacaagggtaacaattcca 571 ||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 517 gctatccttgatgttcctactgacgatgggaaacaccaaacaattagggtaacaattcca 576 Query: 572 gacaaca 578 ||||||| Sbjct: 577 gacaaca 583 >dbj|AK070089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041J01, full insert sequence Length = 1108 Score = 545 bits (275), Expect = e-151 Identities = 389/427 (91%) Strand = Plus / Plus Query: 152 ggccgatgagggcgctggggcgtgggcccgtcgcgcggcggcgctctcgctgctggggct 211 |||||| | |||||| |||| ||||| ||||||||||| |||||||||||| |||||||| Sbjct: 158 ggccgacgcgggcgcgggggagtgggtccgtcgcgcgggggcgctctcgcttctggggct 217 Query: 212 caccggcgccgtcgccgccagcgccgtcagcgacctctccgtattcctctcgtgctccag 271 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 218 caccggcgccgtcgccgccagcgccgtcagcgacctctccgtcttcctctcctgctccag 277 Query: 272 gcaatagagaaggccacccagagccagcaaattgtgaatgcaatcggcaagccgattgtc 331 || |||||||||||| |||||| ||||||||| |||||||| |||||| ||| || || Sbjct: 278 gcgatagagaaggcctcccagaaccagcaaatagtgaatgcgatcggcgcgcccatcgtg 337 Query: 332 cggggtccctggtacagcgcttccattgccgtgaatcacgcgaggcattccgtctcctgc 391 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 338 cggggtccctggtacagcgcttccatcgccgtgaatcacgcgaggcattccgtctcctgc 397 Query: 392 actttccccgtgtcggggccccaaggagatgggcttcttaagttcaaggctgttcgcttg 451 |||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||| | Sbjct: 398 actttccccgtgtcggcgcctcaaggaaatgggcttctcaagttcaaggctgttcgctcg 457 Query: 452 ggagatgaatcttggttttcgtttctacagcacagtaactgggagatactccttatggat 511 |||||||| || |||||||| ||||| |||| || | ||||||| |||||||| |||||| Sbjct: 458 ggagatgagtcgtggttttcatttctgcagcccaatgactgggaaatactcctaatggat 517 Query: 512 gctatccttgatgtttctactgacgacgggaaacaccaaacaacaagggtaacaattcca 571 ||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 518 gctatccttgatgttcctactgacgatgggaaacaccaaacaattagggtaacaattcca 577 Query: 572 gacaaca 578 ||||||| Sbjct: 578 gacaaca 584 >gb|DQ245792.1| Zea mays clone 20366 mRNA sequence Length = 731 Score = 274 bits (138), Expect = 7e-70 Identities = 304/359 (84%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 171 gcgtgggcccgtcgcgcggcggcgctctcgctgctggggctcaccggcgccgtcgccgcc 230 ||||||||| | ||||||| | |||||||||||||||| || || ||||||||||| ||| Sbjct: 164 gcgtgggccggccgcgcggtgacgctctcgctgctgggtctgacgggcgccgtcgcagcc 223 Query: 231 agcgccgtcagcgacctctccgtattcctctcgtgctccag----gcaatagagaaggcc 286 || || ||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 224 agtgctgtcagcgacctctccgtcttcctctcatgctccagccaggcaatagagaaggcc 283 Query: 287 acccagagccagcaaattgtgaatgcaatcggcaagccgattgtccggggtccctggtac 346 ||||||| |||||| || || ||||| ||||| || || || | ||||| ||||||||| Sbjct: 284 acccagaaccagcagatagtcaatgctatcggtaaaccaatcatgcggggaccctggtac 343 Query: 347 agcgcttccattgccgtgaatcacgcgaggcattccgtctcctgcactttccccgtgtcg 406 || ||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||| Sbjct: 344 agtgcttccattgctgtgaatcacgcgaagcattctgtctcctgcactttcccggtgtca 403 Query: 407 gggccccaaggagatgggcttcttaagttcaaggctgttcgcttgggagatgaatcttgg 466 || ||||||||| |||| || || ||| |||| ||||| ||||||||||||||||||||| Sbjct: 404 ggaccccaaggaaatggtctgctcaagctcaaagctgtgcgcttgggagatgaatcttgg 463 Query: 467 ttttcgtttctacagcacagtaactgggagatactccttatggatgctatccttgatgt 525 | ||||| | | |||| || | ||||||||||| | |||||||| ||||||||||| Sbjct: 464 tattcgtatgtgcagcccaccgagtgggagatactgataatggatgccatccttgatgt 522 >emb|CR855030.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0131J24, complete sequence Length = 84805 Score = 246 bits (124), Expect = 2e-61 Identities = 172/188 (91%) Strand = Plus / Plus Query: 268 ccaggcaatagagaaggccacccagagccagcaaattgtgaatgcaatcggcaagccgat 327 |||||| |||||||||||| |||||| ||||||||| |||||||| |||||| ||| || Sbjct: 60406 ccaggcgatagagaaggcctcccagaaccagcaaatagtgaatgcgatcggcgcgcccat 60465 Query: 328 tgtccggggtccctggtacagcgcttccattgccgtgaatcacgcgaggcattccgtctc 387 || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 60466 cgtgcggggtccctggtacagcgcttccattgccgtgaatcatgcgaggcattccgtctc 60525 Query: 388 ctgcactttccccgtgtcggggccccaaggagatgggcttcttaagttcaaggctgttcg 447 |||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||| Sbjct: 60526 ctgcactttccccgtgtcggcgcctcaaggaaatgggcttctcaagttcaaggctgttcg 60585 Query: 448 cttgggag 455 || ||||| Sbjct: 60586 ctcgggag 60593 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 152 ggccgatgagggcgctggggcgtgggcccgtcgcgcggcggcgctctcgctgctggggct 211 |||||| | |||||| |||| ||||| ||||||||||| |||||||||||| |||||||| Sbjct: 59992 ggccgacgcgggcgcgggggagtgggtccgtcgcgcgggggcgctctcgcttctggggct 60051 Query: 212 caccggcgccgtcgccgccagcgccgtcagcgacctctccgtattcctctcgtgctccag 271 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 60052 caccggcgccgtcgccgccagcgccgtcagcgacctctccgtcttcctctcctgctccag 60111 Query: 272 g 272 | Sbjct: 60112 g 60112 Score = 145 bits (73), Expect = 4e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 454 agatgaatcttggttttcgtttctacagcacagtaactgggagatactccttatggatgc 513 |||||| || |||||||| ||||| |||| || | ||||||| |||||||| |||||||| Sbjct: 62987 agatgagtcgtggttttcatttctgcagcccaatgactgggaaatactcctaatggatgc 63046 Query: 514 tatccttgatgtttctactgacgacgggaaacaccaaacaacaagggtaacaattccaga 573 ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 63047 tatccttgatgttcctactgacgatgggaaacaccaaacaattagggtaacaattccaga 63106 Query: 574 caaca 578 ||||| Sbjct: 63107 caaca 63111 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 246 bits (124), Expect = 2e-61 Identities = 172/188 (91%) Strand = Plus / Plus Query: 268 ccaggcaatagagaaggccacccagagccagcaaattgtgaatgcaatcggcaagccgat 327 |||||| |||||||||||| |||||| ||||||||| |||||||| |||||| ||| || Sbjct: 1853963 ccaggcgatagagaaggcctcccagaaccagcaaatagtgaatgcgatcggcgcgcccat 1854022 Query: 328 tgtccggggtccctggtacagcgcttccattgccgtgaatcacgcgaggcattccgtctc 387 || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1854023 cgtgcggggtccctggtacagcgcttccatcgccgtgaatcacgcgaggcattccgtctc 1854082 Query: 388 ctgcactttccccgtgtcggggccccaaggagatgggcttcttaagttcaaggctgttcg 447 |||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||| Sbjct: 1854083 ctgcactttccccgtgtcggcgcctcaaggaaatgggcttctcaagttcaaggctgttcg 1854142 Query: 448 cttgggag 455 || ||||| Sbjct: 1854143 ctcgggag 1854150 Score = 168 bits (85), Expect = 3e-38 Identities = 112/121 (92%) Strand = Plus / Plus Query: 152 ggccgatgagggcgctggggcgtgggcccgtcgcgcggcggcgctctcgctgctggggct 211 |||||| | |||||| |||| ||||| ||||||||||| |||||||||||| |||||||| Sbjct: 1853549 ggccgacgcgggcgcgggggagtgggtccgtcgcgcgggggcgctctcgcttctggggct 1853608 Query: 212 caccggcgccgtcgccgccagcgccgtcagcgacctctccgtattcctctcgtgctccag 271 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 1853609 caccggcgccgtcgccgccagcgccgtcagcgacctctccgtcttcctctcctgctccag 1853668 Query: 272 g 272 | Sbjct: 1853669 g 1853669 Score = 145 bits (73), Expect = 4e-31 Identities = 112/125 (89%) Strand = Plus / Plus Query: 454 agatgaatcttggttttcgtttctacagcacagtaactgggagatactccttatggatgc 513 |||||| || |||||||| ||||| |||| || | ||||||| |||||||| |||||||| Sbjct: 1856546 agatgagtcgtggttttcatttctgcagcccaatgactgggaaatactcctaatggatgc 1856605 Query: 514 tatccttgatgtttctactgacgacgggaaacaccaaacaacaagggtaacaattccaga 573 ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 1856606 tatccttgatgttcctactgacgatgggaaacaccaaacaattagggtaacaattccaga 1856665 Query: 574 caaca 578 ||||| Sbjct: 1856666 caaca 1856670 Score = 129 bits (65), Expect = 3e-26 Identities = 110/125 (88%) Strand = Plus / Plus Query: 454 agatgaatcttggttttcgtttctacagcacagtaactgggagatactccttatggatgc 513 |||||| ||||||||||| || || || | |||| ||||||| ||||| | |||||||| Sbjct: 1968749 agatgagtcttggttttcattcctgcaacgcagtgactgggaaatactattaatggatgc 1968808 Query: 514 tatccttgatgtttctactgacgacgggaaacaccaaacaacaagggtaacaattccaga 573 ||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 1968809 tatccttgatgttcctactgacgatgggaaacaccaaacaattagggtaacaattccaga 1968868 Query: 574 caaca 578 ||||| Sbjct: 1968869 caaca 1968873