BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem102a14 (1229 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001072958.1| Oryza sativa (japonica cultivar-group) Os12g... 615 e-172 gb|BT017167.1| Zea mays clone EL01N0368H01.c mRNA sequence 515 e-142 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 168 3e-38 emb|AL713935.5|CNS07YPG Oryza sativa chromosome 12, . BAC OJ1427... 168 3e-38 >ref|NM_001072958.1| Oryza sativa (japonica cultivar-group) Os12g0225200 (Os12g0225200) mRNA, complete cds Length = 1032 Score = 615 bits (310), Expect = e-172 Identities = 586/678 (86%) Strand = Plus / Plus Query: 335 gccgcctcccgaggtcgctctcctgacgcgcagcttctccgtcgtcatcgacaccgcctc 394 |||||| ||||||||||| ||||| |||| | ||||||||||| | ||||||||| | Sbjct: 291 gccgccgcccgaggtcgcgctcctcgcgcggaacttctccgtcgccgtcgacaccgtagc 350 Query: 395 ccgcggcgccgtgctgcggggagcggccgacctcgccggatcgctgcgcctgcgcgccgc 454 ||| ||||| |||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 351 ccgaagcgccatgctgcggggcgccgccgacctcgccggatcgcttcgcctcagcgccaa 410 Query: 455 gcacaacaccaaggagaaacaaggagaagtggcagtaactacaaatttgggagattcacc 514 |||| ||||||||||| || |||| |||||||| || | |||||||||| |||||||| Sbjct: 411 gcacgacaccaaggagcaaaaaggggaagtggcggtgagagcaaatttgggtgattcacc 470 Query: 515 atgcaagattgaattatcatctctgattcctcctgatggattgccaagagcaaccttcat 574 |||||||||||| ||||||||| || |||| |||||||||||||| || |||||||||| Sbjct: 471 atgcaagattgagttatcatctgtggttccacctgatggattgccgaggacaaccttcat 530 Query: 575 ctttcccaacggtgcagtttcagttaaggagaagaaactggatgagggtgagaaaagtct 634 ||||||||| |||| ||||||||||||| |||| | ||||||| ||||| | | | | Sbjct: 531 ctttcccaatggtgaagtttcagttaagcagaaatatttggatgaaggtgacaggatttt 590 Query: 635 gtcagtaaatggtttagtgaagtctcatgtcctgaacggggtttgcaccgcattgtacaa 694 ||||||||| || |||||| ||||||||| ||||| || |||||||| |||||||||| Sbjct: 591 gtcagtaaacggcatagtgaggtctcatgttctgaatggagtttgcactgcattgtacag 650 Query: 695 tgataatgagatgaacataaaatatcgctataaggatgacgagctatcatttattcccag 754 ||| ||||||||||||||||||||||| || |||||||| ||| ||||||||||||| || Sbjct: 651 tgacaatgagatgaacataaaatatcgttacaaggatgaagagttatcatttattccaag 710 Query: 755 catctctttaccatcaaattcattatccctcgcatttaagcgccagttaactccttcaga 814 | ||||||||||||| |||||| ||||| | |||||||||||||| || ||||||||||| Sbjct: 711 cctctctttaccatccaattcactatcctttgcatttaagcgccaattcactccttcaga 770 Query: 815 caagttgagctatcggtaccattttgacacaaactactggagtgctgtctataaacacaa 874 |||||| ||||| |||||||| ||||||||||||||||||||| | ||||||||||||| Sbjct: 771 caagttaagctaccggtaccagtttgacacaaactactggagttttatctataaacacaa 830 Query: 875 agctagtaagcatgtcaaatggaaagctggttatgagtcagacgaaaggcttggatgggc 934 || |||||||||||||| |||||||||||||||||||| ||| |||||||||||||||| Sbjct: 831 ggccagtaagcatgtcaagtggaaagctggttatgagtctgaccaaaggcttggatgggc 890 Query: 935 atctctttgggttggagatgcaggcggcaagacaaaggaggcgcctatgaagacgaaaat 994 |||||||||||||||||||||||| |||||||| ||||||| |||||||||| | ||| | Sbjct: 891 atctctttgggttggagatgcagggggcaagacgaaggaggtgcctatgaaggctaaagt 950 Query: 995 tcagttcatgcttaaagt 1012 |||||| | ||||||||| Sbjct: 951 tcagttgacgcttaaagt 968 Score = 121 bits (61), Expect = 7e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 197 gcggcggcggccggccgtccgggtgacctcggagtttgacagcgagcgccggctcttctc 256 |||| ||||| |||| ||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 135 gcggaggcggtcggctgtccgcgtcacctcggagttcgacagcgacgcccggctcttctc 194 Query: 257 ccaccgcctctcctgccgcgtactcgacggcctcgccaagctccgcctccgcctccacca 316 ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||| Sbjct: 195 ccaccgcctctcctgccgcgtcatggacggcctcgccaagctccgggtccgggtccacca 254 Query: 317 cgggg 321 ||||| Sbjct: 255 cgggg 259 >gb|BT017167.1| Zea mays clone EL01N0368H01.c mRNA sequence Length = 1324 Score = 515 bits (260), Expect = e-142 Identities = 614/732 (83%) Strand = Plus / Plus Query: 354 ctcctgacgcgcagcttctccgtcgtcatcgacaccgcctcccgcggcgccgtgctgcgg 413 |||||| |||| | ||||||||||||| ||||| | || |||| |||||||||||||| Sbjct: 284 ctcctggcgcggaacttctccgtcgtcgtcgaccctgcaacccgaggcgccgtgctgcgc 343 Query: 414 ggagcggccgacctcgccggatcgctgcgcctgcgcgccgcgcacaacaccaaggagaaa 473 || || |||||||||||||| |||||||| ||||||||| ||||||||||||| ||| || Sbjct: 344 ggcgccgccgacctcgccggctcgctgcgactgcgcgcctcgcacaacaccaaagagcaa 403 Query: 474 caaggagaagtggcagtaactacaaatttgggagattcaccatgcaagattgaattatca 533 ||||||||||||||| | ||| |||||||| | ||||||||||||||||||||| | ||| Sbjct: 404 caaggagaagtggcaattactgcaaatttgagggattcaccatgcaagattgaactgtca 463 Query: 534 tctctgattcctcctgatggattgccaagagcaaccttcatctttcccaacggtgcagtt 593 |||||| |||||||| ||||| |||||||||||| || ||||||| || |||| ||| Sbjct: 464 tctctggttcctcctaatggaccgccaagagcaacttttttctttccaaatggtgaagtc 523 Query: 594 tcagttaaggagaagaaactggatgagggtgagaaaagtctgtcagtaaatggtttagtg 653 ||| |||| ||||||| |||||||| |||| | || | ||||||||||||| ||||| Sbjct: 524 tcaattaaagagaagattttggatgagcgtgacagaattttgtcagtaaatggcctagtg 583 Query: 654 aagtctcatgtcctgaacggggtttgcaccgcattgtacaatgataatgagatgaacata 713 ||||| | ||| ||| | || |||||||| || ||||||||||||||| |||| ||| Sbjct: 584 aagtcacgtgttctgcatggagtttgcacagctgtgtacaatgataatgtaatgagcatt 643 Query: 714 aaatatcgctataaggatgacgagctatcatttattcccagcatctctttaccatcaaat 773 ||||| ||||| |||||||| ||| |||| ||||| ||||||||||| |||||||| ||| Sbjct: 644 aaataccgctacaaggatgatgaggtatcgtttatccccagcatctcattaccatccaat 703 Query: 774 tcattatccctcgcatttaagcgccagttaactccttcagacaagttgagctatcggtac 833 || | || | ||||| |||||||| ||||| |||| ||||||||||||||| ||||| Sbjct: 704 tctctgtcatttgcattcaagcgccaattaacgcctttggacaagttgagctattggtac 763 Query: 834 cattttgacacaaactactggagtgctgtctataaacacaaagctagtaagcatgtcaaa 893 |||||||||||||||||||| | || |||| |||||||| ||| |||||| |||| Sbjct: 764 aattttgacacaaactactggggcgccatctacaaacacaaggctcacaagcatctcaag 823 Query: 894 tggaaagctggttatgagtcagacgaaaggcttggatgggcatctctttgggttggagat 953 ||||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||| Sbjct: 824 tggaaagctggctatgagtcagacaacaggcttggatgggcatcgctttgggttggagat 883 Query: 954 gcaggcggcaagacaaaggaggcgcctatgaagacgaaaattcagttcatgcttaaagta 1013 || ||||||| ||||||||||||||| |||| | |||||||| ||| ||||||||| Sbjct: 884 gctggcggcagtacaaaggaggcgcctttgaaagccaaaattcacctcacgcttaaagtc 943 Query: 1014 cctcaggacgatatacaaaattcagttgtattattccgagtgaagaaaagatgggacttt 1073 || |||||| ||||||| |||||||||||| | |||| || |||||||||||||| ||| Sbjct: 944 ccccaggacaatatacagaattcagttgtagtgttccatgttaagaaaagatgggatttt 1003 Query: 1074 tagcttgtattt 1085 ||| || ||||| Sbjct: 1004 tagtttctattt 1015 Score = 163 bits (82), Expect = 2e-36 Identities = 94/98 (95%) Strand = Plus / Plus Query: 211 ccgtccgggtgacctcggagtttgacagcgagcgccggctcttctcccaccgcctctcct 270 ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 132 ccgtccgcgtgacctcggagtttgacagcgaacgacggctcttctcccaccgcctctcct 191 Query: 271 gccgcgtactcgacggcctcgccaagctccgcctccgc 308 ||||||| |||||||||||||||||||||||||||||| Sbjct: 192 gccgcgtcctcgacggcctcgccaagctccgcctccgc 229 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 168 bits (85), Expect = 3e-38 Identities = 115/125 (92%) Strand = Plus / Plus Query: 822 agctatcggtaccattttgacacaaactactggagtgctgtctataaacacaaagctagt 881 ||||| |||||||| ||||||||||||||||||||| | ||||||||||||| || ||| Sbjct: 6813536 agctaccggtaccagtttgacacaaactactggagttttatctataaacacaaggccagt 6813595 Query: 882 aagcatgtcaaatggaaagctggttatgagtcagacgaaaggcttggatgggcatctctt 941 ||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 6813596 aagcatgtcaagtggaaagctggttatgagtctgaccaaaggcttggatgggcatctctt 6813655 Query: 942 tgggt 946 ||||| Sbjct: 6813656 tgggt 6813660 Score = 129 bits (65), Expect = 3e-26 Identities = 134/157 (85%) Strand = Plus / Plus Query: 565 caaccttcatctttcccaacggtgcagtttcagttaaggagaagaaactggatgagggtg 624 ||||||||||||||||||| |||| ||||||||||||| |||| | ||||||| |||| Sbjct: 6812731 caaccttcatctttcccaatggtgaagtttcagttaagcagaaatatttggatgaaggtg 6812790 Query: 625 agaaaagtctgtcagtaaatggtttagtgaagtctcatgtcctgaacggggtttgcaccg 684 | | | | |||||||||| || |||||| ||||||||| ||||| || |||||||| | Sbjct: 6812791 acaggattttgtcagtaaacggcatagtgaggtctcatgttctgaatggagtttgcactg 6812850 Query: 685 cattgtacaatgataatgagatgaacataaaatatcg 721 ||||||||| ||| ||||||||||||||||||||||| Sbjct: 6812851 cattgtacagtgacaatgagatgaacataaaatatcg 6812887 Score = 121 bits (61), Expect = 7e-24 Identities = 109/125 (87%) Strand = Plus / Plus Query: 197 gcggcggcggccggccgtccgggtgacctcggagtttgacagcgagcgccggctcttctc 256 |||| ||||| |||| ||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 6810373 gcggaggcggtcggctgtccgcgtcacctcggagttcgacagcgacgcccggctcttctc 6810432 Query: 257 ccaccgcctctcctgccgcgtactcgacggcctcgccaagctccgcctccgcctccacca 316 ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||| Sbjct: 6810433 ccaccgcctctcctgccgcgtcatggacggcctcgccaagctccgggtccgggtccacca 6810492 Query: 317 cgggg 321 ||||| Sbjct: 6810493 cgggg 6810497 Score = 107 bits (54), Expect = 1e-19 Identities = 84/94 (89%) Strand = Plus / Plus Query: 727 aggatgacgagctatcatttattcccagcatctctttaccatcaaattcattatccctcg 786 ||||||| ||| ||||||||||||| ||| ||||||||||||| |||||| ||||| | | Sbjct: 6813013 aggatgaagagttatcatttattccaagcctctctttaccatccaattcactatcctttg 6813072 Query: 787 catttaagcgccagttaactccttcagacaagtt 820 ||||||||||||| || ||||||||||||||||| Sbjct: 6813073 catttaagcgccaattcactccttcagacaagtt 6813106 Score = 91.7 bits (46), Expect = 6e-15 Identities = 112/134 (83%) Strand = Plus / Plus Query: 335 gccgcctcccgaggtcgctctcctgacgcgcagcttctccgtcgtcatcgacaccgcctc 394 |||||| ||||||||||| ||||| |||| | ||||||||||| | ||||||||| | Sbjct: 6810529 gccgccgcccgaggtcgcgctcctcgcgcggaacttctccgtcgccgtcgacaccgtagc 6810588 Query: 395 ccgcggcgccgtgctgcggggagcggccgacctcgccggatcgctgcgcctgcgcgccgc 454 ||| ||||| |||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 6810589 ccgaagcgccatgctgcggggcgccgccgacctcgccggatcgcttcgcctcagcgccaa 6810648 Query: 455 gcacaacaccaagg 468 |||| ||||||||| Sbjct: 6810649 gcacgacaccaagg 6810662 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Plus Query: 496 caaatttgggagattcaccatgcaagattgaattatcatctctgattcctcctgatggat 555 |||||||||| |||||||||||||||||||| ||||||||| || |||| |||||||||| Sbjct: 6812523 caaatttgggtgattcaccatgcaagattgagttatcatctgtggttccacctgatggat 6812582 Query: 556 tg 557 || Sbjct: 6812583 tg 6812584 >emb|AL713935.5|CNS07YPG Oryza sativa chromosome 12, . BAC OJ1427_C06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 88558 Score = 168 bits (85), Expect = 3e-38 Identities = 115/125 (92%) Strand = Plus / Minus Query: 822 agctatcggtaccattttgacacaaactactggagtgctgtctataaacacaaagctagt 881 ||||| |||||||| ||||||||||||||||||||| | ||||||||||||| || ||| Sbjct: 4992 agctaccggtaccagtttgacacaaactactggagttttatctataaacacaaggccagt 4933 Query: 882 aagcatgtcaaatggaaagctggttatgagtcagacgaaaggcttggatgggcatctctt 941 ||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 4932 aagcatgtcaagtggaaagctggttatgagtctgaccaaaggcttggatgggcatctctt 4873 Query: 942 tgggt 946 ||||| Sbjct: 4872 tgggt 4868 Score = 129 bits (65), Expect = 3e-26 Identities = 134/157 (85%) Strand = Plus / Minus Query: 565 caaccttcatctttcccaacggtgcagtttcagttaaggagaagaaactggatgagggtg 624 ||||||||||||||||||| |||| ||||||||||||| |||| | ||||||| |||| Sbjct: 5797 caaccttcatctttcccaatggtgaagtttcagttaagcagaaatatttggatgaaggtg 5738 Query: 625 agaaaagtctgtcagtaaatggtttagtgaagtctcatgtcctgaacggggtttgcaccg 684 | | | | |||||||||| || |||||| ||||||||| ||||| || |||||||| | Sbjct: 5737 acaggattttgtcagtaaacggcatagtgaggtctcatgttctgaatggagtttgcactg 5678 Query: 685 cattgtacaatgataatgagatgaacataaaatatcg 721 ||||||||| ||| ||||||||||||||||||||||| Sbjct: 5677 cattgtacagtgacaatgagatgaacataaaatatcg 5641 Score = 121 bits (61), Expect = 7e-24 Identities = 109/125 (87%) Strand = Plus / Minus Query: 197 gcggcggcggccggccgtccgggtgacctcggagtttgacagcgagcgccggctcttctc 256 |||| ||||| |||| ||||| || ||||||||||| |||||||| |||||||||||| Sbjct: 8155 gcggaggcggtcggctgtccgcgtcacctcggagttcgacagcgacgcccggctcttctc 8096 Query: 257 ccaccgcctctcctgccgcgtactcgacggcctcgccaagctccgcctccgcctccacca 316 ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||||| Sbjct: 8095 ccaccgcctctcctgccgcgtcatggacggcctcgccaagctccgggtccgggtccacca 8036 Query: 317 cgggg 321 ||||| Sbjct: 8035 cgggg 8031 Score = 107 bits (54), Expect = 1e-19 Identities = 84/94 (89%) Strand = Plus / Minus Query: 727 aggatgacgagctatcatttattcccagcatctctttaccatcaaattcattatccctcg 786 ||||||| ||| ||||||||||||| ||| ||||||||||||| |||||| ||||| | | Sbjct: 5515 aggatgaagagttatcatttattccaagcctctctttaccatccaattcactatcctttg 5456 Query: 787 catttaagcgccagttaactccttcagacaagtt 820 ||||||||||||| || ||||||||||||||||| Sbjct: 5455 catttaagcgccaattcactccttcagacaagtt 5422 Score = 91.7 bits (46), Expect = 6e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 335 gccgcctcccgaggtcgctctcctgacgcgcagcttctccgtcgtcatcgacaccgcctc 394 |||||| ||||||||||| ||||| |||| | ||||||||||| | ||||||||| | Sbjct: 7999 gccgccgcccgaggtcgcgctcctcgcgcggaacttctccgtcgccgtcgacaccgtagc 7940 Query: 395 ccgcggcgccgtgctgcggggagcggccgacctcgccggatcgctgcgcctgcgcgccgc 454 ||| ||||| |||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 7939 ccgaagcgccatgctgcggggcgccgccgacctcgccggatcgcttcgcctcagcgccaa 7880 Query: 455 gcacaacaccaagg 468 |||| ||||||||| Sbjct: 7879 gcacgacaccaagg 7866 Score = 83.8 bits (42), Expect = 2e-12 Identities = 57/62 (91%) Strand = Plus / Minus Query: 496 caaatttgggagattcaccatgcaagattgaattatcatctctgattcctcctgatggat 555 |||||||||| |||||||||||||||||||| ||||||||| || |||| |||||||||| Sbjct: 6005 caaatttgggtgattcaccatgcaagattgagttatcatctgtggttccacctgatggat 5946 Query: 556 tg 557 || Sbjct: 5945 tg 5944