BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem101i19 (946 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001068297.1| Oryza sativa (japonica cultivar-group) Os08g... 381 e-102 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51 dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51 dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic D... 212 2e-51 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 145 4e-31 >ref|NM_001068297.1| Oryza sativa (japonica cultivar-group) Os08g0403300 (Os08g0403300) mRNA, complete cds Length = 453 Score = 381 bits (192), Expect = e-102 Identities = 395/462 (85%), Gaps = 18/462 (3%) Strand = Plus / Plus Query: 358 atgggaggcaccctgcactgcctgtctcatctgctgctgggaggcagcgg--gcag---- 411 ||||||||||| ||||||| ||||||| ||||||||||||| |||||| | ||| Sbjct: 1 atgggaggcacgctgcactacctgtctgatctgctgctgggtggcagcagcggcaagact 60 Query: 412 aggcacaagaagaggaagcagttcaacacggtggagctcaaggtgaggatggactgcgac 471 || |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 61 agccacaagaagaagaggcagttcaacacggtggagctgaaggtgaggatggactgcgac 120 Query: 472 ggctgcgagctcaaggtcagaaacaccctcgccaacatgaaaggcgtgcagtcggtggag 531 |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| Sbjct: 121 ggctgcgagctcaaggtcaggaacacccttgccaacatgaaaggggtgcagtcggtggag 180 Query: 532 atcaaccggaagcagcagaaggtgacggtgcgggggttcgtggagccgcagcgtgtgctc 591 || ||| |||||||||||||||||||||||| |||| | ||||| ||||||| ||||| Sbjct: 181 ataaacaggaagcagcagaaggtgacggtgcaggggatggtggacacgcagcgggtgctg 240 Query: 592 cggcgagctcagtcgacggggaagcggaccgagctgtggccatacgtgccgtacaccaac 651 ||||| || ||||||||||||||||| |||||||||||||| ||||| || ||||||||| Sbjct: 241 cggcgggcgcagtcgacggggaagcgcaccgagctgtggccgtacgtcccctacaccaac 300 Query: 652 gcctacgtggtgccgc---cggcgtacgacaagagggccccggcggggcacgtgcgcaag 708 | ||||||| ||||| ||||||||||||||| ||| ||| |||||| | ||| | Sbjct: 301 ccgtacgtggcgccgccggcggcgtacgacaagaaggcgccgaacgggcacatccgccgg 360 Query: 709 gtggacgccgtcatgccggtctccgcccacgacgccagccaggaggagcgcttcgccacg 768 ||||||||||| |||||||| || || ||||||||||||||| ||||||| Sbjct: 361 gtggacgccgtgctgccggtcaccccc---------agccaggaggagcgcctcgccacc 411 Query: 769 ctcttcagtgacgacaaccccaacgcgtgctccgtcatgtga 810 |||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 412 ctcttcagcgacgacaaccccaacgcctgcgccgtcatgtga 453 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 212 bits (107), Expect = 2e-51 Identities = 249/297 (83%), Gaps = 12/297 (4%) Strand = Plus / Plus Query: 517 gtgcagtcggtggagatcaaccggaagcagcagaaggtgacggtgcgggggttcgtggag 576 ||||||||||||||||| ||| |||||||||||||||||||||||| |||| | ||||| Sbjct: 19237959 gtgcagtcggtggagataaacaggaagcagcagaaggtgacggtgcaggggatggtggac 19238018 Query: 577 ccgcagcgtgtgctccggcgagctcagtcgacggggaagcggaccgagctgtggccatac 636 ||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 19238019 acgcagcgggtgctgcggcgggcgcagtcgacggggaagcgcaccgagctgtggccgtac 19238078 Query: 637 gtgccgtacaccaacgcctacgtggtgccgc---cggcgtacgacaagagggccccggcg 693 || || ||||||||| | ||||||| ||||| ||||||||||||||| ||| ||| Sbjct: 19238079 gtcccctacaccaacccgtacgtggcgccgccggcggcgtacgacaagaaggcgccgaac 19238138 Query: 694 gggcacgtgcgcaaggtggacgccgtcatgccggtctccgcccacgacgccagccaggag 753 |||||| | ||| |||||||||||| |||||||| || || ||||||||| Sbjct: 19238139 gggcacatccgccgggtggacgccgtgctgccggtcaccccc---------agccaggag 19238189 Query: 754 gagcgcttcgccacgctcttcagtgacgacaaccccaacgcgtgctccgtcatgtga 810 |||||| ||||||| |||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 19238190 gagcgcctcgccaccctcttcagcgacgacaaccccaacgcctgcgccgtcatgtga 19238246 Score = 174 bits (88), Expect = 4e-40 Identities = 146/164 (89%), Gaps = 6/164 (3%) Strand = Plus / Plus Query: 358 atgggaggcaccctgcactgcctgtctcatctgctgctgggaggcagcgg--gcag---- 411 ||||||||||| ||||||| ||||||| ||||||||||||| |||||| | ||| Sbjct: 19237482 atgggaggcacgctgcactacctgtctgatctgctgctgggtggcagcagcggcaagact 19237541 Query: 412 aggcacaagaagaggaagcagttcaacacggtggagctcaaggtgaggatggactgcgac 471 || |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19237542 agccacaagaagaagaggcagttcaacacggtggagctgaaggtgaggatggactgcgac 19237601 Query: 472 ggctgcgagctcaaggtcagaaacaccctcgccaacatgaaagg 515 |||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 19237602 ggctgcgagctcaaggtcaggaacacccttgccaacatgaaagg 19237645 >dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 212 bits (107), Expect = 2e-51 Identities = 249/297 (83%), Gaps = 12/297 (4%) Strand = Plus / Plus Query: 517 gtgcagtcggtggagatcaaccggaagcagcagaaggtgacggtgcgggggttcgtggag 576 ||||||||||||||||| ||| |||||||||||||||||||||||| |||| | ||||| Sbjct: 10972 gtgcagtcggtggagataaacaggaagcagcagaaggtgacggtgcaggggatggtggac 11031 Query: 577 ccgcagcgtgtgctccggcgagctcagtcgacggggaagcggaccgagctgtggccatac 636 ||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 11032 acgcagcgggtgctgcggcgggcgcagtcgacggggaagcgcaccgagctgtggccgtac 11091 Query: 637 gtgccgtacaccaacgcctacgtggtgccgc---cggcgtacgacaagagggccccggcg 693 || || ||||||||| | ||||||| ||||| ||||||||||||||| ||| ||| Sbjct: 11092 gtcccctacaccaacccgtacgtggcgccgccggcggcgtacgacaagaaggcgccgaac 11151 Query: 694 gggcacgtgcgcaaggtggacgccgtcatgccggtctccgcccacgacgccagccaggag 753 |||||| | ||| |||||||||||| |||||||| || || ||||||||| Sbjct: 11152 gggcacatccgccgggtggacgccgtgctgccggtcaccccc---------agccaggag 11202 Query: 754 gagcgcttcgccacgctcttcagtgacgacaaccccaacgcgtgctccgtcatgtga 810 |||||| ||||||| |||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 11203 gagcgcctcgccaccctcttcagcgacgacaaccccaacgcctgcgccgtcatgtga 11259 Score = 174 bits (88), Expect = 4e-40 Identities = 146/164 (89%), Gaps = 6/164 (3%) Strand = Plus / Plus Query: 358 atgggaggcaccctgcactgcctgtctcatctgctgctgggaggcagcgg--gcag---- 411 ||||||||||| ||||||| ||||||| ||||||||||||| |||||| | ||| Sbjct: 10495 atgggaggcacgctgcactacctgtctgatctgctgctgggtggcagcagcggcaagact 10554 Query: 412 aggcacaagaagaggaagcagttcaacacggtggagctcaaggtgaggatggactgcgac 471 || |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10555 agccacaagaagaagaggcagttcaacacggtggagctgaaggtgaggatggactgcgac 10614 Query: 472 ggctgcgagctcaaggtcagaaacaccctcgccaacatgaaagg 515 |||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 10615 ggctgcgagctcaaggtcaggaacacccttgccaacatgaaagg 10658 >dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 212 bits (107), Expect = 2e-51 Identities = 249/297 (83%), Gaps = 12/297 (4%) Strand = Plus / Plus Query: 517 gtgcagtcggtggagatcaaccggaagcagcagaaggtgacggtgcgggggttcgtggag 576 ||||||||||||||||| ||| |||||||||||||||||||||||| |||| | ||||| Sbjct: 160324 gtgcagtcggtggagataaacaggaagcagcagaaggtgacggtgcaggggatggtggac 160383 Query: 577 ccgcagcgtgtgctccggcgagctcagtcgacggggaagcggaccgagctgtggccatac 636 ||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||| ||| Sbjct: 160384 acgcagcgggtgctgcggcgggcgcagtcgacggggaagcgcaccgagctgtggccgtac 160443 Query: 637 gtgccgtacaccaacgcctacgtggtgccgc---cggcgtacgacaagagggccccggcg 693 || || ||||||||| | ||||||| ||||| ||||||||||||||| ||| ||| Sbjct: 160444 gtcccctacaccaacccgtacgtggcgccgccggcggcgtacgacaagaaggcgccgaac 160503 Query: 694 gggcacgtgcgcaaggtggacgccgtcatgccggtctccgcccacgacgccagccaggag 753 |||||| | ||| |||||||||||| |||||||| || || ||||||||| Sbjct: 160504 gggcacatccgccgggtggacgccgtgctgccggtcaccccc---------agccaggag 160554 Query: 754 gagcgcttcgccacgctcttcagtgacgacaaccccaacgcgtgctccgtcatgtga 810 |||||| ||||||| |||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 160555 gagcgcctcgccaccctcttcagcgacgacaaccccaacgcctgcgccgtcatgtga 160611 Score = 174 bits (88), Expect = 4e-40 Identities = 146/164 (89%), Gaps = 6/164 (3%) Strand = Plus / Plus Query: 358 atgggaggcaccctgcactgcctgtctcatctgctgctgggaggcagcgg--gcag---- 411 ||||||||||| ||||||| ||||||| ||||||||||||| |||||| | ||| Sbjct: 159847 atgggaggcacgctgcactacctgtctgatctgctgctgggtggcagcagcggcaagact 159906 Query: 412 aggcacaagaagaggaagcagttcaacacggtggagctcaaggtgaggatggactgcgac 471 || |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 159907 agccacaagaagaagaggcagttcaacacggtggagctgaaggtgaggatggactgcgac 159966 Query: 472 ggctgcgagctcaaggtcagaaacaccctcgccaacatgaaagg 515 |||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 159967 ggctgcgagctcaaggtcaggaacacccttgccaacatgaaagg 160010 >dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 145 bits (73), Expect = 4e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 411 gaggcacaagaagaggaagcagttcaacacggtggagctcaaggtgaggatggactgcga 470 |||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 11922863 gaggtacaagaagaggaagcagttccagacggtggagctcaaggtgaggatggactgcga 11922922 Query: 471 cggctgcgagctcaaggtcagaaacaccctcgccaacatgaaagg 515 ||||||||||||||| ||||| ||| ||||| ||| ||||||||| Sbjct: 11922923 cggctgcgagctcaaagtcaggaacgccctctccagcatgaaagg 11922967 Score = 89.7 bits (45), Expect = 2e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 517 gtgcagtcggtggagatcaaccggaagcagcagaaggtgacggtgcgggggttcgtggag 576 ||||||||||||||||| ||| |||||||| | ||||||||||||| ||||||||||||| Sbjct: 11923566 gtgcagtcggtggagataaacaggaagcagtacaaggtgacggtgcaggggttcgtggag 11923625 Query: 577 ccgca 581 ||||| Sbjct: 11923626 ccgca 11923630