BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem101d04 (1384 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 242 3e-60 dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic D... 242 3e-60 dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 242 3e-60 gb|AY110500.1| Zea mays CL51040_1 mRNA sequence 240 1e-59 ref|NM_001052741.1| Oryza sativa (japonica cultivar-group) Os02g... 208 4e-50 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 242 bits (122), Expect = 3e-60 Identities = 221/254 (87%) Strand = Plus / Plus Query: 911 ggacgacataatgggcgaggccgaggtcgacctgcagccgatgatcactgcagcaatggc 970 ||||||||| ||||| ||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 23883761 ggacgacatcatgggggaggccgaggtggacctgcagccgatgatcaccgccgctatggc 23883820 Query: 971 gttcggagaccccgacctgctcgcggacatgcagatcggcaagtggctcaagtccgagga 1030 |||||| ||||||| ||||| ||||||||||||||||| |||||||| ||| || Sbjct: 23883821 gttcggtgaccccgggctgctgtcggacatgcagatcggccggtggctcatgtcgcgcga 23883880 Query: 1031 caacgcgctcgtcaaggacagcgccgtcaacgtcgtcgacggcaaggtgaagcaggaggt 1090 ||| ||||||| || ||||||||| || | |||||||| ||||| ||||||||||||||| Sbjct: 23883881 caatgcgctcgccagggacagcgcggtgagcgtcgtcggcggcagggtgaagcaggaggt 23883940 Query: 1091 ctcgctgaggctgcagaacgttgagtccggagaggtggacctggagctggaatggatacc 1150 ||| |||||||||||||| || |||| |||||||||||||||||||||||| ||||| | Sbjct: 23883941 ctccctgaggctgcagaatgtggagtgcggagaggtggacctggagctggagtggattgc 23884000 Query: 1151 tctcaaccagtaga 1164 |||||||||||||| Sbjct: 23884001 tctcaaccagtaga 23884014 Score = 198 bits (100), Expect = 4e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 373 aggttctttcggtcactctagatcaatggactgaagatgagattaactccatgatagaag 432 ||||||| || |||||||||||| | |||||||| |||||||||||||||||| |||||| Sbjct: 23882591 aggttctatcagtcactctagatgagtggactgatgatgagattaactccatgctagaag 23882650 Query: 433 ttggtgggaactcttatgccaatgctatctatgaggcatttctgccagagggctatcaca 492 | ||||| |||||||| |||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 23882651 tcggtggaaactcttacgccaatgcaatctatgaggcatttcttccaggaggctatcaca 23882710 Query: 493 agccacatgcagattctagccaggaagagagagcaaattttatcaggt 540 |||||||| | |||||||||||||||||||||||| |||| ||||||| Sbjct: 23882711 agccacatcccgattctagccaggaagagagagcagatttcatcaggt 23882758 Score = 125 bits (63), Expect = 5e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 535 tcaggtcgaagtacgagttgcaagaatttctgaagccaggcctaaggataatatctaaca 594 ||||||| ||||| |||||||||||||||||||||||| |||| |||||| | ||||||| Sbjct: 23883084 tcaggtcaaagtatgagttgcaagaatttctgaagccaagcctgaggatagtttctaaca 23883143 Query: 595 agagctctttacaggccactgactcaagaaaagatacagagagtgcttcttattctgata 654 |||||||||||||||||| ||||| |||||||||| | | ||||||| ||||| | | Sbjct: 23883144 agagctctttacaggccatggactctagaaaagatattggcaatgcttctaattcttaca 23883203 Query: 655 gtttcaagagtgagg 669 | ||||||||||||| Sbjct: 23883204 gcttcaagagtgagg 23883218 Score = 119 bits (60), Expect = 3e-23 Identities = 81/88 (92%) Strand = Plus / Plus Query: 211 cagataagatgagaaagctcaaagagttgctgcacaagagtgacaaccgcatatgtgctg 270 |||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||| Sbjct: 23882128 cagataagatgagaaagctcaaggagctgctgcacaagagtgaaaaccgaatatgtgctg 23882187 Query: 271 actgcagcgcgcctgatcccagatgggc 298 |||||||| | |||||||||| |||||| Sbjct: 23882188 actgcagctcacctgatcccaaatgggc 23882215 Score = 101 bits (51), Expect = 7e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 667 aggctggcatggttgagtttattggaatattaaaagttaaagtgataagaggcactaaat 726 ||||||| ||||||||||| ||||||||| |||| ||||||||||| ||||| |||||| Sbjct: 23883312 aggctggtatggttgagttcattggaataataaaggttaaagtgatcagagggactaaac 23883371 Query: 727 tagctataagagacatgctaagtagtgacccctacgtcgtactgacccttggaca 781 ||||| | |||||||| ||||| || || || ||||| || |||||||||||||| Sbjct: 23883372 tagctgtgagagacattctaagcagcgatccttacgttgtgctgacccttggaca 23883426 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 299 atcagctaatattggagtattcttatgcctaaaatgctctggtgttcacagaagtctcgg 358 |||||||||||| ||||| ||| ||||||||||||| ||||| ||||||||||||| || Sbjct: 23882292 atcagctaatataggagttttcatatgcctaaaatgttctggaattcacagaagtctggg 23882351 Query: 359 gacacatgtttcaaaggtt 377 ||| ||| ||||||||||| Sbjct: 23882352 gacgcatatttcaaaggtt 23882370 >dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 242 bits (122), Expect = 3e-60 Identities = 221/254 (87%) Strand = Plus / Plus Query: 911 ggacgacataatgggcgaggccgaggtcgacctgcagccgatgatcactgcagcaatggc 970 ||||||||| ||||| ||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 13372 ggacgacatcatgggggaggccgaggtggacctgcagccgatgatcaccgccgctatggc 13431 Query: 971 gttcggagaccccgacctgctcgcggacatgcagatcggcaagtggctcaagtccgagga 1030 |||||| ||||||| ||||| ||||||||||||||||| |||||||| ||| || Sbjct: 13432 gttcggtgaccccgggctgctgtcggacatgcagatcggccggtggctcatgtcgcgcga 13491 Query: 1031 caacgcgctcgtcaaggacagcgccgtcaacgtcgtcgacggcaaggtgaagcaggaggt 1090 ||| ||||||| || ||||||||| || | |||||||| ||||| ||||||||||||||| Sbjct: 13492 caatgcgctcgccagggacagcgcggtgagcgtcgtcggcggcagggtgaagcaggaggt 13551 Query: 1091 ctcgctgaggctgcagaacgttgagtccggagaggtggacctggagctggaatggatacc 1150 ||| |||||||||||||| || |||| |||||||||||||||||||||||| ||||| | Sbjct: 13552 ctccctgaggctgcagaatgtggagtgcggagaggtggacctggagctggagtggattgc 13611 Query: 1151 tctcaaccagtaga 1164 |||||||||||||| Sbjct: 13612 tctcaaccagtaga 13625 Score = 198 bits (100), Expect = 4e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 373 aggttctttcggtcactctagatcaatggactgaagatgagattaactccatgatagaag 432 ||||||| || |||||||||||| | |||||||| |||||||||||||||||| |||||| Sbjct: 12202 aggttctatcagtcactctagatgagtggactgatgatgagattaactccatgctagaag 12261 Query: 433 ttggtgggaactcttatgccaatgctatctatgaggcatttctgccagagggctatcaca 492 | ||||| |||||||| |||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 12262 tcggtggaaactcttacgccaatgcaatctatgaggcatttcttccaggaggctatcaca 12321 Query: 493 agccacatgcagattctagccaggaagagagagcaaattttatcaggt 540 |||||||| | |||||||||||||||||||||||| |||| ||||||| Sbjct: 12322 agccacatcccgattctagccaggaagagagagcagatttcatcaggt 12369 Score = 125 bits (63), Expect = 5e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 535 tcaggtcgaagtacgagttgcaagaatttctgaagccaggcctaaggataatatctaaca 594 ||||||| ||||| |||||||||||||||||||||||| |||| |||||| | ||||||| Sbjct: 12695 tcaggtcaaagtatgagttgcaagaatttctgaagccaagcctgaggatagtttctaaca 12754 Query: 595 agagctctttacaggccactgactcaagaaaagatacagagagtgcttcttattctgata 654 |||||||||||||||||| ||||| |||||||||| | | ||||||| ||||| | | Sbjct: 12755 agagctctttacaggccatggactctagaaaagatattggcaatgcttctaattcttaca 12814 Query: 655 gtttcaagagtgagg 669 | ||||||||||||| Sbjct: 12815 gcttcaagagtgagg 12829 Score = 119 bits (60), Expect = 3e-23 Identities = 81/88 (92%) Strand = Plus / Plus Query: 211 cagataagatgagaaagctcaaagagttgctgcacaagagtgacaaccgcatatgtgctg 270 |||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||| Sbjct: 11739 cagataagatgagaaagctcaaggagctgctgcacaagagtgaaaaccgaatatgtgctg 11798 Query: 271 actgcagcgcgcctgatcccagatgggc 298 |||||||| | |||||||||| |||||| Sbjct: 11799 actgcagctcacctgatcccaaatgggc 11826 Score = 101 bits (51), Expect = 7e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 667 aggctggcatggttgagtttattggaatattaaaagttaaagtgataagaggcactaaat 726 ||||||| ||||||||||| ||||||||| |||| ||||||||||| ||||| |||||| Sbjct: 12923 aggctggtatggttgagttcattggaataataaaggttaaagtgatcagagggactaaac 12982 Query: 727 tagctataagagacatgctaagtagtgacccctacgtcgtactgacccttggaca 781 ||||| | |||||||| ||||| || || || ||||| || |||||||||||||| Sbjct: 12983 tagctgtgagagacattctaagcagcgatccttacgttgtgctgacccttggaca 13037 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 299 atcagctaatattggagtattcttatgcctaaaatgctctggtgttcacagaagtctcgg 358 |||||||||||| ||||| ||| ||||||||||||| ||||| ||||||||||||| || Sbjct: 11903 atcagctaatataggagttttcatatgcctaaaatgttctggaattcacagaagtctggg 11962 Query: 359 gacacatgtttcaaaggtt 377 ||| ||| ||||||||||| Sbjct: 11963 gacgcatatttcaaaggtt 11981 >dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 242 bits (122), Expect = 3e-60 Identities = 221/254 (87%) Strand = Plus / Plus Query: 911 ggacgacataatgggcgaggccgaggtcgacctgcagccgatgatcactgcagcaatggc 970 ||||||||| ||||| ||||||||||| |||||||||||||||||||| || || ||||| Sbjct: 123426 ggacgacatcatgggggaggccgaggtggacctgcagccgatgatcaccgccgctatggc 123485 Query: 971 gttcggagaccccgacctgctcgcggacatgcagatcggcaagtggctcaagtccgagga 1030 |||||| ||||||| ||||| ||||||||||||||||| |||||||| ||| || Sbjct: 123486 gttcggtgaccccgggctgctgtcggacatgcagatcggccggtggctcatgtcgcgcga 123545 Query: 1031 caacgcgctcgtcaaggacagcgccgtcaacgtcgtcgacggcaaggtgaagcaggaggt 1090 ||| ||||||| || ||||||||| || | |||||||| ||||| ||||||||||||||| Sbjct: 123546 caatgcgctcgccagggacagcgcggtgagcgtcgtcggcggcagggtgaagcaggaggt 123605 Query: 1091 ctcgctgaggctgcagaacgttgagtccggagaggtggacctggagctggaatggatacc 1150 ||| |||||||||||||| || |||| |||||||||||||||||||||||| ||||| | Sbjct: 123606 ctccctgaggctgcagaatgtggagtgcggagaggtggacctggagctggagtggattgc 123665 Query: 1151 tctcaaccagtaga 1164 |||||||||||||| Sbjct: 123666 tctcaaccagtaga 123679 Score = 198 bits (100), Expect = 4e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 373 aggttctttcggtcactctagatcaatggactgaagatgagattaactccatgatagaag 432 ||||||| || |||||||||||| | |||||||| |||||||||||||||||| |||||| Sbjct: 122256 aggttctatcagtcactctagatgagtggactgatgatgagattaactccatgctagaag 122315 Query: 433 ttggtgggaactcttatgccaatgctatctatgaggcatttctgccagagggctatcaca 492 | ||||| |||||||| |||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 122316 tcggtggaaactcttacgccaatgcaatctatgaggcatttcttccaggaggctatcaca 122375 Query: 493 agccacatgcagattctagccaggaagagagagcaaattttatcaggt 540 |||||||| | |||||||||||||||||||||||| |||| ||||||| Sbjct: 122376 agccacatcccgattctagccaggaagagagagcagatttcatcaggt 122423 Score = 125 bits (63), Expect = 5e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 535 tcaggtcgaagtacgagttgcaagaatttctgaagccaggcctaaggataatatctaaca 594 ||||||| ||||| |||||||||||||||||||||||| |||| |||||| | ||||||| Sbjct: 122749 tcaggtcaaagtatgagttgcaagaatttctgaagccaagcctgaggatagtttctaaca 122808 Query: 595 agagctctttacaggccactgactcaagaaaagatacagagagtgcttcttattctgata 654 |||||||||||||||||| ||||| |||||||||| | | ||||||| ||||| | | Sbjct: 122809 agagctctttacaggccatggactctagaaaagatattggcaatgcttctaattcttaca 122868 Query: 655 gtttcaagagtgagg 669 | ||||||||||||| Sbjct: 122869 gcttcaagagtgagg 122883 Score = 119 bits (60), Expect = 3e-23 Identities = 81/88 (92%) Strand = Plus / Plus Query: 211 cagataagatgagaaagctcaaagagttgctgcacaagagtgacaaccgcatatgtgctg 270 |||||||||||||||||||||| ||| |||||||||||||||| ||||| |||||||||| Sbjct: 121793 cagataagatgagaaagctcaaggagctgctgcacaagagtgaaaaccgaatatgtgctg 121852 Query: 271 actgcagcgcgcctgatcccagatgggc 298 |||||||| | |||||||||| |||||| Sbjct: 121853 actgcagctcacctgatcccaaatgggc 121880 Score = 101 bits (51), Expect = 7e-18 Identities = 99/115 (86%) Strand = Plus / Plus Query: 667 aggctggcatggttgagtttattggaatattaaaagttaaagtgataagaggcactaaat 726 ||||||| ||||||||||| ||||||||| |||| ||||||||||| ||||| |||||| Sbjct: 122977 aggctggtatggttgagttcattggaataataaaggttaaagtgatcagagggactaaac 123036 Query: 727 tagctataagagacatgctaagtagtgacccctacgtcgtactgacccttggaca 781 ||||| | |||||||| ||||| || || || ||||| || |||||||||||||| Sbjct: 123037 tagctgtgagagacattctaagcagcgatccttacgttgtgctgacccttggaca 123091 Score = 85.7 bits (43), Expect = 4e-13 Identities = 70/79 (88%) Strand = Plus / Plus Query: 299 atcagctaatattggagtattcttatgcctaaaatgctctggtgttcacagaagtctcgg 358 |||||||||||| ||||| ||| ||||||||||||| ||||| ||||||||||||| || Sbjct: 121957 atcagctaatataggagttttcatatgcctaaaatgttctggaattcacagaagtctggg 122016 Query: 359 gacacatgtttcaaaggtt 377 ||| ||| ||||||||||| Sbjct: 122017 gacgcatatttcaaaggtt 122035 >gb|AY110500.1| Zea mays CL51040_1 mRNA sequence Length = 668 Score = 240 bits (121), Expect = 1e-59 Identities = 280/335 (83%) Strand = Plus / Minus Query: 830 gaatgaagagcttaagctgtcagttcctcagcaatacggacctctcaaactgcaagtgtt 889 |||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||| Sbjct: 665 gaatgaagagcttaagctgtcagttcnccagcagtacgggcctctgaagcttcaagtgtt 606 Query: 890 cgactacgacatcatatccaaggacgacataatgggcgaggccgaggtcgacctgcagcc 949 |||| |||||| |||| ||||| ||| |||||||| || ||| | ||||||||||| Sbjct: 605 cgaccccgacatgctatcgaaggatgacgagatgggcgacgcggagattgacctgcagcc 546 Query: 950 gatgatcactgcagcaatggcgttcggagaccccgacctgctcgcggacatgcagatcgg 1009 |||||||| |||||| | ||||| || ||||| || ||||||||||||||||||||||| Sbjct: 545 gatgatcagtgcagctacagcgtttggcgaccctgatctgctcgcggacatgcagatcgg 486 Query: 1010 caagtggctcaagtccgaggacaacgcgctcgtcaaggacagcgccgtcaacgtcgtcga 1069 ||||||||||| |||| || || ||||| | | ||||||||||||||| ||||| | Sbjct: 485 caagtggctcaggtccccagataatgcgctggcaagggacagcgccgtcaatgtcgttgg 426 Query: 1070 cggcaaggtgaagcaggaggtctcgctgaggctgcagaacgttgagtccggagaggtgga 1129 |||||||| |||||||||||||| ||||||||||||||||| || || ||||||| Sbjct: 425 tggcaaggtcaagcaggaggtctctctgaggctgcagaacgtggaatcnnnnnaggtgga 366 Query: 1130 cctggagctggaatggatacctctcaaccagtaga 1164 ||||||||||| |||||||| ||||| ||||||| Sbjct: 365 actggagctggagtggataccactcaatcagtaga 331 >ref|NM_001052741.1| Oryza sativa (japonica cultivar-group) Os02g0198300 (Os02g0198300) mRNA, partial cds Length = 1637 Score = 208 bits (105), Expect = 4e-50 Identities = 231/273 (84%) Strand = Plus / Plus Query: 816 ctgaatcctgtttggaatgaagagcttaagctgtcagttcctcagcaatacggacctctc 875 ||||| ||||| ||||| ||||| || ||||| || ||||||||||||||||| |||||| Sbjct: 1057 ctgaaccctgtctggaacgaagaactcaagctctctgttcctcagcaatacggccctctc 1116 Query: 876 aaactgcaagtgttcgactacgacatcatatccaaggacgacataatgggcgaggccgag 935 |||||||||||||||||| ||||||| | |||||||||||| | ||||| ||||||||| Sbjct: 1117 aaactgcaagtgttcgaccacgacatgctgtccaaggacgacctgatgggggaggccgag 1176 Query: 936 gtcgacctgcagccgatgatcactgcagcaatggcgttcggagaccccgacctgctcgcg 995 ||||||||||||||||||||| || || ||||||||| ||||| | ||||||| Sbjct: 1177 atcgacctgcagccgatgatcaacgcggcggcggcgttcggcgacccggggctgctcggc 1236 Query: 996 gacatgcagatcggcaagtggctcaagtccgaggacaacgcgctcgtcaaggacagcgcc 1055 ||| |||||||||| |||||||||||||| |||||||||||||||| |||||||||| Sbjct: 1237 gaccggcagatcggccggtggctcaagtccggcgacaacgcgctcgtcagggacagcgcc 1296 Query: 1056 gtcaacgtcgtcgacggcaaggtgaagcaggag 1088 ||| |||| || |||| |||||| ||||||| Sbjct: 1297 gtcgtggtcgccggcggcgaggtgaggcaggag 1329 Score = 133 bits (67), Expect = 2e-27 Identities = 268/335 (80%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 249 agtgacaaccgcatatgtgctgactgcagcgcgcctgatcccagatgggcatcagctaat 308 ||||| ||||| || ||||||||||||||||||||||| |||| |||||| ||||| Sbjct: 507 agtgaaaaccgtatctgtgctgactgcagcgcgcctgaccccaaatgggc-----ctaat 561 Query: 309 attggagtattcttatgcctaaaatgctctggtgttcacagaagtctcgggacacatgtt 368 || ||||||||| ||||||| || || || ||||||||||||||||| || ||||| || Sbjct: 562 ataggagtattcatatgcctcaagtgttccggtgttcacagaagtcttggcacacacatt 621 Query: 369 tcaaaggttctttcggtcactctagatcaatggactgaagatgagattaactccatgata 428 ||||||||||| || ||||| |||||||| |||| ||| |||| ||| | | |||| Sbjct: 622 tcaaaggttctgtcagtcacactagatcagtggagtgacaatgaaattgataacgtgatc 681 Query: 429 gaagttggtgggaactcttatgccaatgctatctatgaggcatttctgccagagggctat 488 ||||| ||||| || ||| | ||||||||||| ||||| | || ||||| || | | Sbjct: 682 gaagtcggtggaaattctcacgccaatgctatatatgaaaccttcctgccgcagaaccac 741 Query: 489 cacaagccacatgcagattctagccaggaagagagagcaaattttatcaggtcgaagtac 548 |||||||||| ||||||||| |||||||||| ||| ||| || |||||||| || || Sbjct: 742 agcaagccacatccagattctacccaggaagagcgagaaaaattcatcaggtcaaaatat 801 Query: 549 gagttgcaagaatttctgaagccaggcctaaggat 583 ||||| ||||| ||||| ||||| ||||| |||| Sbjct: 802 gagttacaagagtttcttgagccaagcctacggat 836