BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem101a12 (1288 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 178 4e-41 dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic D... 178 4e-41 dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic D... 178 4e-41 ref|NM_001063955.1| Oryza sativa (japonica cultivar-group) Os06g... 157 1e-34 dbj|AK068835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 1e-34 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 178 bits (90), Expect = 4e-41 Identities = 138/154 (89%) Strand = Plus / Plus Query: 727 ggaagttgaagagagaaagcacaatagcaggacagatacagaagaatgcacctctctact 786 ||||||| ||||||| || |||||||||||||||| | |||||||| |||||||| |||| Sbjct: 10532338 ggaagttcaagagaggaaacacaatagcaggacaggttcagaagaacgcacctctatact 10532397 Query: 787 gtgaagtcaagattgtctgtgatggcaaagaagttataacggtgacgactgctgatccga 846 |||||||||||||||||||||||||||| || |||| ||| ||| | ||||||||||| | Sbjct: 10532398 gtgaagtcaagattgtctgtgatggcaaggaggttacaactgtgccaactgctgatccaa 10532457 Query: 847 caccaccattttcaccttctcctgtaaaaaacaa 880 |||||||| ||||||||||||||||||| ||||| Sbjct: 10532458 caccaccaatttcaccttctcctgtaaataacaa 10532491 Score = 157 bits (79), Expect = 1e-34 Identities = 124/139 (89%) Strand = Plus / Plus Query: 350 cgccgacgacgtgtacgtggcggtcggcaagggtgggtccagcatggcggcgctgtcgtg 409 ||||| |||||||||||||||||| || ||||| ||||| ||||||| |||||||||||| Sbjct: 10528626 cgccgccgacgtgtacgtggcggtggggaagggcgggtcaagcatggaggcgctgtcgtg 10528685 Query: 410 ggcgctggggcgcctcaccaagccccggagcttcgtctacctcgtgcacgtcttccccgt 469 ||||||| |||| || || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 10528686 ggcgctgcggcggctggcctcgccgcggagcttcgtctacctcgtgcacgtcttccccgt 10528745 Query: 470 ggtcaccagcatccccacc 488 |||| ||||||||||||| Sbjct: 10528746 cgtcatcagcatccccacc 10528764 Score = 137 bits (69), Expect = 1e-28 Identities = 108/121 (89%) Strand = Plus / Plus Query: 493 taggaatgatgcctaagagccaagcaagcccaaagcaggtagaaacttacatgaatcagg 552 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || | Sbjct: 10531897 taggaatgatgcccaagagccaagcaagcccagagcaggtagaaacttacatgaaccaag 10531956 Query: 553 agagattgaagaggcgagagatgctgaaaaaatttctagaccagtgccgcaactttcagg 612 |||||| |||||||| | |||||| |||||| | ||||||| |||||||||||||||| Sbjct: 10531957 agagatcaaagaggcgtgtgatgctacaaaaatatttagaccattgccgcaactttcagg 10532016 Query: 613 t 613 | Sbjct: 10532017 t 10532017 >dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1026E06 Length = 162784 Score = 178 bits (90), Expect = 4e-41 Identities = 138/154 (89%) Strand = Plus / Plus Query: 727 ggaagttgaagagagaaagcacaatagcaggacagatacagaagaatgcacctctctact 786 ||||||| ||||||| || |||||||||||||||| | |||||||| |||||||| |||| Sbjct: 108952 ggaagttcaagagaggaaacacaatagcaggacaggttcagaagaacgcacctctatact 109011 Query: 787 gtgaagtcaagattgtctgtgatggcaaagaagttataacggtgacgactgctgatccga 846 |||||||||||||||||||||||||||| || |||| ||| ||| | ||||||||||| | Sbjct: 109012 gtgaagtcaagattgtctgtgatggcaaggaggttacaactgtgccaactgctgatccaa 109071 Query: 847 caccaccattttcaccttctcctgtaaaaaacaa 880 |||||||| ||||||||||||||||||| ||||| Sbjct: 109072 caccaccaatttcaccttctcctgtaaataacaa 109105 Score = 157 bits (79), Expect = 1e-34 Identities = 124/139 (89%) Strand = Plus / Plus Query: 350 cgccgacgacgtgtacgtggcggtcggcaagggtgggtccagcatggcggcgctgtcgtg 409 ||||| |||||||||||||||||| || ||||| ||||| ||||||| |||||||||||| Sbjct: 105240 cgccgccgacgtgtacgtggcggtggggaagggcgggtcaagcatggaggcgctgtcgtg 105299 Query: 410 ggcgctggggcgcctcaccaagccccggagcttcgtctacctcgtgcacgtcttccccgt 469 ||||||| |||| || || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 105300 ggcgctgcggcggctggcctcgccgcggagcttcgtctacctcgtgcacgtcttccccgt 105359 Query: 470 ggtcaccagcatccccacc 488 |||| ||||||||||||| Sbjct: 105360 cgtcatcagcatccccacc 105378 Score = 137 bits (69), Expect = 1e-28 Identities = 108/121 (89%) Strand = Plus / Plus Query: 493 taggaatgatgcctaagagccaagcaagcccaaagcaggtagaaacttacatgaatcagg 552 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || | Sbjct: 108511 taggaatgatgcccaagagccaagcaagcccagagcaggtagaaacttacatgaaccaag 108570 Query: 553 agagattgaagaggcgagagatgctgaaaaaatttctagaccagtgccgcaactttcagg 612 |||||| |||||||| | |||||| |||||| | ||||||| |||||||||||||||| Sbjct: 108571 agagatcaaagaggcgtgtgatgctacaaaaatatttagaccattgccgcaactttcagg 108630 Query: 613 t 613 | Sbjct: 108631 t 108631 >dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 178 bits (90), Expect = 4e-41 Identities = 138/154 (89%) Strand = Plus / Plus Query: 727 ggaagttgaagagagaaagcacaatagcaggacagatacagaagaatgcacctctctact 786 ||||||| ||||||| || |||||||||||||||| | |||||||| |||||||| |||| Sbjct: 69045 ggaagttcaagagaggaaacacaatagcaggacaggttcagaagaacgcacctctatact 69104 Query: 787 gtgaagtcaagattgtctgtgatggcaaagaagttataacggtgacgactgctgatccga 846 |||||||||||||||||||||||||||| || |||| ||| ||| | ||||||||||| | Sbjct: 69105 gtgaagtcaagattgtctgtgatggcaaggaggttacaactgtgccaactgctgatccaa 69164 Query: 847 caccaccattttcaccttctcctgtaaaaaacaa 880 |||||||| ||||||||||||||||||| ||||| Sbjct: 69165 caccaccaatttcaccttctcctgtaaataacaa 69198 Score = 157 bits (79), Expect = 1e-34 Identities = 124/139 (89%) Strand = Plus / Plus Query: 350 cgccgacgacgtgtacgtggcggtcggcaagggtgggtccagcatggcggcgctgtcgtg 409 ||||| |||||||||||||||||| || ||||| ||||| ||||||| |||||||||||| Sbjct: 65333 cgccgccgacgtgtacgtggcggtggggaagggcgggtcaagcatggaggcgctgtcgtg 65392 Query: 410 ggcgctggggcgcctcaccaagccccggagcttcgtctacctcgtgcacgtcttccccgt 469 ||||||| |||| || || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 65393 ggcgctgcggcggctggcctcgccgcggagcttcgtctacctcgtgcacgtcttccccgt 65452 Query: 470 ggtcaccagcatccccacc 488 |||| ||||||||||||| Sbjct: 65453 cgtcatcagcatccccacc 65471 Score = 137 bits (69), Expect = 1e-28 Identities = 108/121 (89%) Strand = Plus / Plus Query: 493 taggaatgatgcctaagagccaagcaagcccaaagcaggtagaaacttacatgaatcagg 552 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || | Sbjct: 68604 taggaatgatgcccaagagccaagcaagcccagagcaggtagaaacttacatgaaccaag 68663 Query: 553 agagattgaagaggcgagagatgctgaaaaaatttctagaccagtgccgcaactttcagg 612 |||||| |||||||| | |||||| |||||| | ||||||| |||||||||||||||| Sbjct: 68664 agagatcaaagaggcgtgtgatgctacaaaaatatttagaccattgccgcaactttcagg 68723 Query: 613 t 613 | Sbjct: 68724 t 68724 >ref|NM_001063955.1| Oryza sativa (japonica cultivar-group) Os06g0291500 (Os06g0291500) mRNA, complete cds Length = 2715 Score = 157 bits (79), Expect = 1e-34 Identities = 124/139 (89%) Strand = Plus / Plus Query: 350 cgccgacgacgtgtacgtggcggtcggcaagggtgggtccagcatggcggcgctgtcgtg 409 ||||| |||||||||||||||||| || ||||| ||||| ||||||| |||||||||||| Sbjct: 251 cgccgccgacgtgtacgtggcggtggggaagggcgggtcaagcatggaggcgctgtcgtg 310 Query: 410 ggcgctggggcgcctcaccaagccccggagcttcgtctacctcgtgcacgtcttccccgt 469 ||||||| |||| || || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 311 ggcgctgcggcggctggcctcgccgcggagcttcgtctacctcgtgcacgtcttccccgt 370 Query: 470 ggtcaccagcatccccacc 488 |||| ||||||||||||| Sbjct: 371 cgtcatcagcatccccacc 389 >dbj|AK068835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158G20, full insert sequence Length = 2716 Score = 157 bits (79), Expect = 1e-34 Identities = 124/139 (89%) Strand = Plus / Plus Query: 350 cgccgacgacgtgtacgtggcggtcggcaagggtgggtccagcatggcggcgctgtcgtg 409 ||||| |||||||||||||||||| || ||||| ||||| ||||||| |||||||||||| Sbjct: 253 cgccgccgacgtgtacgtggcggtggggaagggcgggtcaagcatggaggcgctgtcgtg 312 Query: 410 ggcgctggggcgcctcaccaagccccggagcttcgtctacctcgtgcacgtcttccccgt 469 ||||||| |||| || || ||| ||||||||||||||||||||||||||||||||||| Sbjct: 313 ggcgctgcggcggctggcctcgccgcggagcttcgtctacctcgtgcacgtcttccccgt 372 Query: 470 ggtcaccagcatccccacc 488 |||| ||||||||||||| Sbjct: 373 cgtcatcagcatccccacc 391