BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem003k10 (817 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835821.1| Oryza sativa (indica cultivar-group) cDNA clone:... 664 0.0 dbj|AK243603.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 646 0.0 ref|NM_001070431.1| Oryza sativa (japonica cultivar-group) Os09g... 642 0.0 gb|AY109254.1| Zea mays PCO099296 mRNA sequence 618 e-174 gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome ... 178 2e-41 >emb|CT835821.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA029N04, full insert sequence Length = 914 Score = 664 bits (335), Expect = 0.0 Identities = 592/676 (87%), Gaps = 5/676 (0%) Strand = Plus / Plus Query: 115 gatgcattccttcgggcatcgcgcgaacatggtggcgacgttcgcagtgacgatcctggc 174 ||||||||| |||||||| ||||| ||| ||||||||||||||| ||||| |||||||| Sbjct: 116 gatgcattcgttcgggcaccgcgccaacgcggtggcgacgttcgcggtgaccatcctggc 175 Query: 175 cgcgatgtgcttcgccgcctccttctcggaccacttcaactcctcctcccccaccgcctc 234 ||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 176 cgccatgtgcttcgccgcctccttctccgaccacttcaactccccttcccccaccgcctc 235 Query: 235 cgtcaagatcttgaacataaactggttccagaaagaggccaacagcaacgacgaggttag 294 |||||||||||||||||||||||||| ||||| || |||||| ||||||||||||| || Sbjct: 236 tgtcaagatcttgaacataaactggtttcagaaggaagccaacggcaacgacgaggtcag 295 Query: 295 catgacgctgaacatttcggccgacctttcctctctgttcacgtggaacacaaaacaggt 354 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 296 catgacgctgaacatttcggctgacctctcgtctctgttcacgtggaacacaaaacaggt 355 Query: 355 gtttgtttttgtggcggctgagtatgagactccacagaatgccttgaatcaagtttccct 414 ||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 356 ctttgtttttgtcgcagctgaatatgagactccacaaaatgccttgaatcaagtttccct 415 Query: 415 ttgggatggaattataccagcaaaggaacacgccaagttttttatccataccaccaataa 474 |||||||| ||||||||| |||| || |||||||||||||| |||||||| || || || Sbjct: 416 ctgggatggcattataccatcaaaagagcacgccaagtttttgatccatacaacaaacaa 475 Query: 475 gtacaggtttattgaccagggaagcgatctaaaaggcaaggatttcaacttgacaatgca 534 |||||| |||||||||||||||||| | || ||||| |||||||| ||| |||||||||| Sbjct: 476 gtacagatttattgaccagggaagcaacctcaaaggaaaggattttaacctgacaatgca 535 Query: 535 ttggcatattatgccaaagaccggcaagatgtttgcagataagatagtcatgacaggtta 594 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 536 ctggcatattatgccaaagaccggcaagatgtttgcagacaagatagtcatgacaggtta 595 Query: 595 tcggctccctgatcagtacagatag----acctgag-cagctcgatggacgccgtgctaa 649 |||||| ||||| |||||||||||| ||||||| ||||| ||||| || ||||| Sbjct: 596 tcggctacctgaacagtacagatagaagaacctgagttagctcaatggatgctttgctat 655 Query: 650 gcaaatacaatggttattagagggagcagaccggcaagaaggtttagtagcagtggcata 709 ||||| || |||||||| |||||||||| | |||||||||||||||||| ||| Sbjct: 656 acaaatgcagtggttattgcggggagcagacatgggagaaggtttagtagcagtaacatt 715 Query: 710 gctggtgctgaactttttgttctaatcttagccgaacatgtagtcttatgagcttgtttg 769 || |||| | |||||||||||||| |||| |||||||| |||| || |||||| | Sbjct: 716 gcctatgctaagttttttgttctaatcgtagcaaaacatgtaatcttttgtgcttgtgtt 775 Query: 770 ttagctgaaaccaggc 785 ||||||||||||||| Sbjct: 776 ctagctgaaaccaggc 791 >dbj|AK243603.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100085D05, full insert sequence Length = 932 Score = 646 bits (326), Expect = 0.0 Identities = 461/506 (91%) Strand = Plus / Plus Query: 115 gatgcattccttcgggcatcgcgcgaacatggtggcgacgttcgcagtgacgatcctggc 174 ||||||||| |||||||| ||||| ||| ||||||||||||||| ||||| |||||||| Sbjct: 126 gatgcattcgttcgggcaccgcgccaacgcggtggcgacgttcgcggtgaccatcctggc 185 Query: 175 cgcgatgtgcttcgccgcctccttctcggaccacttcaactcctcctcccccaccgcctc 234 ||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 186 cgccatgtgcttcgccgcctccttctccgaccacttcaactccccttcccccaccgcctc 245 Query: 235 cgtcaagatcttgaacataaactggttccagaaagaggccaacagcaacgacgaggttag 294 |||||||||||||||||||||||||| ||||| || |||||| ||||||||||||| || Sbjct: 246 tgtcaagatcttgaacataaactggtttcagaaggaagccaacggcaacgacgaggtcag 305 Query: 295 catgacgctgaacatttcggccgacctttcctctctgttcacgtggaacacaaaacaggt 354 ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 306 catgacgctgaacatttcggctgacctctcgtctctgttcacgtggaacacaaaacaggt 365 Query: 355 gtttgtttttgtggcggctgagtatgagactccacagaatgccttgaatcaagtttccct 414 ||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 366 ctttgtttttgtcgcagctgaatatgagactccacaaaatgccttgaatcaagtttccct 425 Query: 415 ttgggatggaattataccagcaaaggaacacgccaagttttttatccataccaccaataa 474 |||||||| ||||||||| |||| || |||||||||||||| |||||||| || || || Sbjct: 426 ctgggatggcattataccatcaaaagagcacgccaagtttttgatccatacaacaaacaa 485 Query: 475 gtacaggtttattgaccagggaagcgatctaaaaggcaaggatttcaacttgacaatgca 534 |||||| |||||||||||||||||| | || ||||| |||||||| ||| |||||||||| Sbjct: 486 gtacagatttattgaccagggaagcaacctcaaaggaaaggattttaacctgacaatgca 545 Query: 535 ttggcatattatgccaaagaccggcaagatgtttgcagataagatagtcatgacaggtta 594 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 546 ctggcatattatgccaaagaccggcaagatgtttgcagacaagatagtcatgacaggtta 605 Query: 595 tcggctccctgatcagtacagataga 620 |||||| ||||| ||||||||||||| Sbjct: 606 tcggctacctgaacagtacagataga 631 >ref|NM_001070431.1| Oryza sativa (japonica cultivar-group) Os09g0556000 (Os09g0556000) mRNA, complete cds Length = 504 Score = 642 bits (324), Expect = 0.0 Identities = 459/504 (91%) Strand = Plus / Plus Query: 116 atgcattccttcgggcatcgcgcgaacatggtggcgacgttcgcagtgacgatcctggcc 175 |||||||| |||||||| ||||| ||| ||||||||||||||| ||||| ||||||||| Sbjct: 1 atgcattcgttcgggcaccgcgccaacgcggtggcgacgttcgcggtgaccatcctggcc 60 Query: 176 gcgatgtgcttcgccgcctccttctcggaccacttcaactcctcctcccccaccgcctcc 235 || ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 61 gccatgtgcttcgccgcctccttctccgaccacttcaactccccttcccccaccgcctct 120 Query: 236 gtcaagatcttgaacataaactggttccagaaagaggccaacagcaacgacgaggttagc 295 |||||||||||||||||||||||||| ||||| || |||||| ||||||||||||| ||| Sbjct: 121 gtcaagatcttgaacataaactggtttcagaaggaagccaacggcaacgacgaggtcagc 180 Query: 296 atgacgctgaacatttcggccgacctttcctctctgttcacgtggaacacaaaacaggtg 355 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 181 atgacgctgaacatttcggctgacctctcgtctctgttcacgtggaacacaaaacaggtc 240 Query: 356 tttgtttttgtggcggctgagtatgagactccacagaatgccttgaatcaagtttccctt 415 ||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 241 tttgtttttgtcgcagctgaatatgagactccacaaaatgccttgaatcaagtttccctc 300 Query: 416 tgggatggaattataccagcaaaggaacacgccaagttttttatccataccaccaataag 475 |||||||| ||||||||| |||| || |||||||||||||| |||||||| || || ||| Sbjct: 301 tgggatggcattataccatcaaaagagcacgccaagtttttgatccatacaacaaacaag 360 Query: 476 tacaggtttattgaccagggaagcgatctaaaaggcaaggatttcaacttgacaatgcat 535 ||||| |||||||||||||||||| | || ||||| |||||||| ||| |||||||||| Sbjct: 361 tacagatttattgaccagggaagcaacctcaaaggaaaggattttaacctgacaatgcac 420 Query: 536 tggcatattatgccaaagaccggcaagatgtttgcagataagatagtcatgacaggttat 595 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 tggcatattatgccaaagaccggcaagatgtttgcagacaagatagtcatgacaggttat 480 Query: 596 cggctccctgatcagtacagatag 619 ||||| ||||| |||||||||||| Sbjct: 481 cggctacctgaacagtacagatag 504 >gb|AY109254.1| Zea mays PCO099296 mRNA sequence Length = 899 Score = 618 bits (312), Expect = e-174 Identities = 462/512 (90%) Strand = Plus / Plus Query: 108 gcgacaagatgcattccttcgggcatcgcgcgaacatggtggcgacgttcgcagtgacga 167 |||||| |||||| ||||| ||||| ||||| ||| |||||| |||||||| || || | Sbjct: 190 gcgacaggatgcactcctttgggcaccgcgccaacgcggtggcaacgttcgcggtcacca 249 Query: 168 tcctggccgcgatgtgcttcgccgcctccttctcggaccacttcaactcctcctccccca 227 | ||||||||||| |||||||||||||||||||| ||| |||||||| || | | |||| Sbjct: 250 tactggccgcgatttgcttcgccgcctccttctccgacaacttcaacaccccaacaccca 309 Query: 228 ccgcctccgtcaagatcttgaacataaactggttccagaaagaggccaacagcaacgacg 287 | |||||||| ||||||||||| |||||||||||||||| ||||||||| ||||||||| Sbjct: 310 ctgcctccgttaagatcttgaatctaaactggttccagaaggaggccaacggcaacgacg 369 Query: 288 aggttagcatgacgctgaacatttcggccgacctttcctctctgttcacgtggaacacaa 347 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 370 aggttagcatgacgctgaacatttcggccgacctttcgtctcttttcacgtggaacacaa 429 Query: 348 aacaggtgtttgtttttgtggcggctgagtatgagactccacagaatgccttgaatcaag 407 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||| Sbjct: 430 aacaggtgtttgtttttgtggcagcagagtatgagactccacagaatgctttgaatcaag 489 Query: 408 tttccctttgggatggaattataccagcaaaggaacacgccaagttttttatccatacca 467 |||||||||||||||| |||||||| |||||||| || ||||||||||| |||||||| | Sbjct: 490 tttccctttgggatggcattatacctgcaaaggagcatgccaagtttttgatccatacaa 549 Query: 468 ccaataagtacaggtttattgaccagggaagcgatctaaaaggcaaggatttcaacttga 527 | ||||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 550 caaataagtacagatttattgaccagggaagcaatctaaagggcaaggaattcaacttga 609 Query: 528 caatgcattggcatattatgccaaagaccggcaagatgtttgcagataagatagtcatga 587 ||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 610 caatgcactggcacattatgccaaagactggcaaaatgtttgcagataagatagtcatga 669 Query: 588 caggttatcggctccctgatcagtacagatag 619 |||| |||| ||| ||||| |||||||||||| Sbjct: 670 caggctatcagcttcctgagcagtacagatag 701 >gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0043I04, complete sequence Length = 145191 Score = 178 bits (90), Expect = 2e-41 Identities = 120/130 (92%) Strand = Plus / Minus Query: 491 cagggaagcgatctaaaaggcaaggatttcaacttgacaatgcattggcatattatgcca 550 ||||||||| | || ||||| |||||||| ||| |||||||||| ||||||||||||||| Sbjct: 137287 cagggaagcaacctcaaaggaaaggattttaacctgacaatgcactggcatattatgcca 137228 Query: 551 aagaccggcaagatgtttgcagataagatagtcatgacaggttatcggctccctgatcag 610 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| Sbjct: 137227 aagaccggcaagatgtttgcagacaagatagtcatgacaggttatcggctacctgaacag 137168 Query: 611 tacagataga 620 |||||||||| Sbjct: 137167 tacagataga 137158 Score = 157 bits (79), Expect = 8e-35 Identities = 115/127 (90%) Strand = Plus / Minus Query: 115 gatgcattccttcgggcatcgcgcgaacatggtggcgacgttcgcagtgacgatcctggc 174 ||||||||| |||||||| ||||| ||| ||||||||||||||| ||||| |||||||| Sbjct: 139772 gatgcattcgttcgggcaccgcgccaacgcggtggcgacgttcgcggtgaccatcctggc 139713 Query: 175 cgcgatgtgcttcgccgcctccttctcggaccacttcaactcctcctcccccaccgcctc 234 ||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 139712 cgccatgtgcttcgccgcctccttctccgaccacttcaactccccttcccccaccgcctc 139653 Query: 235 cgtcaag 241 |||||| Sbjct: 139652 tgtcaag 139646 Score = 101 bits (51), Expect = 4e-18 Identities = 63/67 (94%) Strand = Plus / Minus Query: 288 aggttagcatgacgctgaacatttcggccgacctttcctctctgttcacgtggaacacaa 347 |||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 139283 aggtcagcatgacgctgaacatttcggctgacctctcgtctctgttcacgtggaacacaa 139224 Query: 348 aacaggt 354 ||||||| Sbjct: 139223 aacaggt 139217 Score = 95.6 bits (48), Expect = 3e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 407 gtttccctttgggatggaattataccagcaaaggaacacgccaagttttttatccatacc 466 |||||||| |||||||| ||||||||| |||| || |||||||||||||| |||||||| Sbjct: 137968 gtttccctctgggatggcattataccatcaaaagagcacgccaagtttttgatccataca 137909 Query: 467 accaataagtacaggtttattgaccagg 494 || || |||||||| ||||||||||||| Sbjct: 137908 acaaacaagtacagatttattgaccagg 137881