BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem003j10 (796 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001051711.1| Oryza sativa (japonica cultivar-group) Os01g... 305 1e-79 dbj|AK101364.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 1e-79 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 250 7e-63 dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D... 250 7e-63 dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic D... 250 7e-63 >ref|NM_001051711.1| Oryza sativa (japonica cultivar-group) Os01g0914000 (Os01g0914000) mRNA, complete cds Length = 834 Score = 305 bits (154), Expect = 1e-79 Identities = 220/242 (90%) Strand = Plus / Plus Query: 93 ttctgtaactgcgagatggaggcgctagacgattgcaagtggcgccaaatcccggcgttc 152 |||||| |||||| ||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 205 ttctgtcactgcgttatggaggcgctcgatgactgcaagtggcgccaaatcccggcgttc 264 Query: 153 ggcgactggaacatgtgggatgacatgcccgtcacccagtactttgagtcaggaaccttc 212 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| || ||| Sbjct: 265 ggcgactggaatatatgggatgatatgcccgtcacccaatacttcgagtcagggactttc 324 Query: 213 ttcttcacagcgcaagcagagaaagacgaggacctcttcaaggtgccccagttccctgcc 272 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 325 ttcttcacagcacaagcagagaaagatgaggacctcttcaaggtgccccagttccctgcc 384 Query: 273 cagccctacaactacaagaagtgtgttgttcgagtgaatggggagaaagtaaatgcaaat 332 | |||||||||||||||||||| |||||||||||||| |||||||||| ||| || ||| Sbjct: 385 aacccctacaactacaagaagtgcgttgttcgagtgaaaggggagaaagaaaacgcgaat 444 Query: 333 gc 334 || Sbjct: 445 gc 446 Score = 196 bits (99), Expect = 1e-46 Identities = 173/197 (87%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 324 aatgcaaatgctgtgcctgtgaggaagggaggcaggaagcat---tgtgcgaatgagcag 380 ||||| |||||||||| |||||| |||||||| |||||||| | | |||||||||| Sbjct: 448 aatgcgaatgctgtgcgtgtgagaaagggaggaaggaagcagcagtatctgaatgagcag 507 Query: 381 cagaagtggaagccaaaggcagcagtggatgaggacctgtacaggatctcccccaagcta 440 |||||||||||||||||| | |||||||||||||||||||||| |||||| || |||||| Sbjct: 508 cagaagtggaagccaaagacggcagtggatgaggacctgtacaagatctcaccaaagcta 567 Query: 441 ctctgcaaggtgaagaagaagaagttgctgaggaatttgctgggagagtgcctgggtctg 500 |||||| ||||||||||||||||||||||||||||||||| |||| |||||| || || Sbjct: 568 atctgcagggtgaagaagaagaagttgctgaggaatttgctaggagggtgccttggcgtg 627 Query: 501 aactgcatcgcctgaaa 517 ||||||||||| ||||| Sbjct: 628 aactgcatcgcttgaaa 644 >dbj|AK101364.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035K05, full insert sequence Length = 835 Score = 305 bits (154), Expect = 1e-79 Identities = 220/242 (90%) Strand = Plus / Plus Query: 93 ttctgtaactgcgagatggaggcgctagacgattgcaagtggcgccaaatcccggcgttc 152 |||||| |||||| ||||||||||| || || ||||||||||||||||||||||||||| Sbjct: 206 ttctgtcactgcgttatggaggcgctcgatgactgcaagtggcgccaaatcccggcgttc 265 Query: 153 ggcgactggaacatgtgggatgacatgcccgtcacccagtactttgagtcaggaaccttc 212 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| || ||| Sbjct: 266 ggcgactggaatatatgggatgatatgcccgtcacccaatacttcgagtcagggactttc 325 Query: 213 ttcttcacagcgcaagcagagaaagacgaggacctcttcaaggtgccccagttccctgcc 272 ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 326 ttcttcacagcacaagcagagaaagatgaggacctcttcaaggtgccccagttccctgcc 385 Query: 273 cagccctacaactacaagaagtgtgttgttcgagtgaatggggagaaagtaaatgcaaat 332 | |||||||||||||||||||| |||||||||||||| |||||||||| ||| || ||| Sbjct: 386 aacccctacaactacaagaagtgcgttgttcgagtgaaaggggagaaagaaaacgcgaat 445 Query: 333 gc 334 || Sbjct: 446 gc 447 Score = 196 bits (99), Expect = 1e-46 Identities = 173/197 (87%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 324 aatgcaaatgctgtgcctgtgaggaagggaggcaggaagcat---tgtgcgaatgagcag 380 ||||| |||||||||| |||||| |||||||| |||||||| | | |||||||||| Sbjct: 449 aatgcgaatgctgtgcgtgtgagaaagggaggaaggaagcagcagtatctgaatgagcag 508 Query: 381 cagaagtggaagccaaaggcagcagtggatgaggacctgtacaggatctcccccaagcta 440 |||||||||||||||||| | |||||||||||||||||||||| |||||| || |||||| Sbjct: 509 cagaagtggaagccaaagacggcagtggatgaggacctgtacaagatctcaccaaagcta 568 Query: 441 ctctgcaaggtgaagaagaagaagttgctgaggaatttgctgggagagtgcctgggtctg 500 |||||| ||||||||||||||||||||||||||||||||| |||| |||||| || || Sbjct: 569 atctgcagggtgaagaagaagaagttgctgaggaatttgctaggagggtgccttggcgtg 628 Query: 501 aactgcatcgcctgaaa 517 ||||||||||| ||||| Sbjct: 629 aactgcatcgcttgaaa 645 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 250 bits (126), Expect = 7e-63 Identities = 168/182 (92%) Strand = Plus / Minus Query: 112 aggcgctagacgattgcaagtggcgccaaatcccggcgttcggcgactggaacatgtggg 171 ||||||| || || |||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 39824069 aggcgctcgatgactgcaagtggcgccaaatcccggcgttcggcgactggaatatatggg 39824010 Query: 172 atgacatgcccgtcacccagtactttgagtcaggaaccttcttcttcacagcgcaagcag 231 |||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||| Sbjct: 39824009 atgatatgcccgtcacccaatacttcgagtcagggactttcttcttcacagcacaagcag 39823950 Query: 232 agaaagacgaggacctcttcaaggtgccccagttccctgcccagccctacaactacaaga 291 ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 39823949 agaaagatgaggacctcttcaaggtgccccagttccctgccaacccctacaactacaaga 39823890 Query: 292 ag 293 || Sbjct: 39823889 ag 39823888 Score = 127 bits (64), Expect = 7e-26 Identities = 120/138 (86%), Gaps = 3/138 (2%) Strand = Plus / Minus Query: 324 aatgcaaatgctgtgcctgtgaggaagggaggcaggaagcat---tgtgcgaatgagcag 380 ||||| |||||||||| |||||| |||||||| |||||||| | | |||||||||| Sbjct: 39823705 aatgcgaatgctgtgcgtgtgagaaagggaggaaggaagcagcagtatctgaatgagcag 39823646 Query: 381 cagaagtggaagccaaaggcagcagtggatgaggacctgtacaggatctcccccaagcta 440 |||||||||||||||||| | |||||||||||||||||||||| |||||| || |||||| Sbjct: 39823645 cagaagtggaagccaaagacggcagtggatgaggacctgtacaagatctcaccaaagcta 39823586 Query: 441 ctctgcaaggtgaagaag 458 |||||| |||||||||| Sbjct: 39823585 atctgcagggtgaagaag 39823568 >dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004D12 Length = 138136 Score = 250 bits (126), Expect = 7e-63 Identities = 168/182 (92%) Strand = Plus / Minus Query: 112 aggcgctagacgattgcaagtggcgccaaatcccggcgttcggcgactggaacatgtggg 171 ||||||| || || |||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 4777 aggcgctcgatgactgcaagtggcgccaaatcccggcgttcggcgactggaatatatggg 4718 Query: 172 atgacatgcccgtcacccagtactttgagtcaggaaccttcttcttcacagcgcaagcag 231 |||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||| Sbjct: 4717 atgatatgcccgtcacccaatacttcgagtcagggactttcttcttcacagcacaagcag 4658 Query: 232 agaaagacgaggacctcttcaaggtgccccagttccctgcccagccctacaactacaaga 291 ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 4657 agaaagatgaggacctcttcaaggtgccccagttccctgccaacccctacaactacaaga 4598 Query: 292 ag 293 || Sbjct: 4597 ag 4596 Score = 127 bits (64), Expect = 7e-26 Identities = 120/138 (86%), Gaps = 3/138 (2%) Strand = Plus / Minus Query: 324 aatgcaaatgctgtgcctgtgaggaagggaggcaggaagcat---tgtgcgaatgagcag 380 ||||| |||||||||| |||||| |||||||| |||||||| | | |||||||||| Sbjct: 4413 aatgcgaatgctgtgcgtgtgagaaagggaggaaggaagcagcagtatctgaatgagcag 4354 Query: 381 cagaagtggaagccaaaggcagcagtggatgaggacctgtacaggatctcccccaagcta 440 |||||||||||||||||| | |||||||||||||||||||||| |||||| || |||||| Sbjct: 4353 cagaagtggaagccaaagacggcagtggatgaggacctgtacaagatctcaccaaagcta 4294 Query: 441 ctctgcaaggtgaagaag 458 |||||| |||||||||| Sbjct: 4293 atctgcagggtgaagaag 4276 >dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 250 bits (126), Expect = 7e-63 Identities = 168/182 (92%) Strand = Plus / Minus Query: 112 aggcgctagacgattgcaagtggcgccaaatcccggcgttcggcgactggaacatgtggg 171 ||||||| || || |||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 174968 aggcgctcgatgactgcaagtggcgccaaatcccggcgttcggcgactggaatatatggg 174909 Query: 172 atgacatgcccgtcacccagtactttgagtcaggaaccttcttcttcacagcgcaagcag 231 |||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||| Sbjct: 174908 atgatatgcccgtcacccaatacttcgagtcagggactttcttcttcacagcacaagcag 174849 Query: 232 agaaagacgaggacctcttcaaggtgccccagttccctgcccagccctacaactacaaga 291 ||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 174848 agaaagatgaggacctcttcaaggtgccccagttccctgccaacccctacaactacaaga 174789 Query: 292 ag 293 || Sbjct: 174788 ag 174787 Score = 127 bits (64), Expect = 7e-26 Identities = 120/138 (86%), Gaps = 3/138 (2%) Strand = Plus / Minus Query: 324 aatgcaaatgctgtgcctgtgaggaagggaggcaggaagcat---tgtgcgaatgagcag 380 ||||| |||||||||| |||||| |||||||| |||||||| | | |||||||||| Sbjct: 174604 aatgcgaatgctgtgcgtgtgagaaagggaggaaggaagcagcagtatctgaatgagcag 174545 Query: 381 cagaagtggaagccaaaggcagcagtggatgaggacctgtacaggatctcccccaagcta 440 |||||||||||||||||| | |||||||||||||||||||||| |||||| || |||||| Sbjct: 174544 cagaagtggaagccaaagacggcagtggatgaggacctgtacaagatctcaccaaagcta 174485 Query: 441 ctctgcaaggtgaagaag 458 |||||| |||||||||| Sbjct: 174484 atctgcagggtgaagaag 174467