BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem003a20
         (679 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   137   6e-29
dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D...   137   6e-29
dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D...   137   6e-29
ref|NM_001050224.1| Oryza sativa (japonica cultivar-group) Os01g...   135   3e-28
dbj|AK105174.1| Oryza sativa (japonica cultivar-group) cDNA clon...   135   3e-28

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  137 bits (69), Expect = 6e-29
 Identities = 140/165 (84%), Gaps = 9/165 (5%)
 Strand = Plus / Minus

                                                                            
Query: 60       agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119
                ||||| ||||||||||| || |||||||||||||| || || ||||||||         |
Sbjct: 25794884 agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 25794834

                                                                            
Query: 120      aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179
                ||||| || || ||||||||||||||||||  ||||||||| | ||| ||||||||||||
Sbjct: 25794833 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 25794774

                                                             
Query: 180      gtcaagaagcctgagcagaagccccgggagcctaagaagaaggta 224
                ||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 25794773 gtcaagaaggctgagcagaagccccgggagcccaagaagaaggta 25794729


>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039G05
          Length = 138429

 Score =  137 bits (69), Expect = 6e-29
 Identities = 140/165 (84%), Gaps = 9/165 (5%)
 Strand = Plus / Minus

                                                                         
Query: 60    agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119
             ||||| ||||||||||| || |||||||||||||| || || ||||||||         |
Sbjct: 97348 agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 97298

                                                                         
Query: 120   aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179
             ||||| || || ||||||||||||||||||  ||||||||| | ||| ||||||||||||
Sbjct: 97297 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 97238

                                                          
Query: 180   gtcaagaagcctgagcagaagccccgggagcctaagaagaaggta 224
             ||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 97237 gtcaagaaggctgagcagaagccccgggagcccaagaagaaggta 97193


>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0510C12
          Length = 177049

 Score =  137 bits (69), Expect = 6e-29
 Identities = 140/165 (84%), Gaps = 9/165 (5%)
 Strand = Plus / Minus

                                                                         
Query: 60    agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119
             ||||| ||||||||||| || |||||||||||||| || || ||||||||         |
Sbjct: 34808 agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 34758

                                                                         
Query: 120   aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179
             ||||| || || ||||||||||||||||||  ||||||||| | ||| ||||||||||||
Sbjct: 34757 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 34698

                                                          
Query: 180   gtcaagaagcctgagcagaagccccgggagcctaagaagaaggta 224
             ||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 34697 gtcaagaaggctgagcagaagccccgggagcccaagaagaaggta 34653


>ref|NM_001050224.1| Oryza sativa (japonica cultivar-group) Os01g0642200 (Os01g0642200)
           mRNA, complete cds
          Length = 458

 Score =  135 bits (68), Expect = 3e-28
 Identities = 139/164 (84%), Gaps = 9/164 (5%)
 Strand = Plus / Plus

                                                                       
Query: 60  agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119
           ||||| ||||||||||| || |||||||||||||| || || ||||||||         |
Sbjct: 68  agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 118

                                                                       
Query: 120 aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179
           ||||| || || ||||||||||||||||||  ||||||||| | ||| ||||||||||||
Sbjct: 119 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 178

                                                       
Query: 180 gtcaagaagcctgagcagaagccccgggagcctaagaagaaggt 223
           ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 179 gtcaagaaggctgagcagaagccccgggagcccaagaagaaggt 222


>dbj|AK105174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H01, full
           insert sequence
          Length = 458

 Score =  135 bits (68), Expect = 3e-28
 Identities = 139/164 (84%), Gaps = 9/164 (5%)
 Strand = Plus / Plus

                                                                       
Query: 60  agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119
           ||||| ||||||||||| || |||||||||||||| || || ||||||||         |
Sbjct: 68  agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 118

                                                                       
Query: 120 aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179
           ||||| || || ||||||||||||||||||  ||||||||| | ||| ||||||||||||
Sbjct: 119 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 178

                                                       
Query: 180 gtcaagaagcctgagcagaagccccgggagcctaagaagaaggt 223
           ||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 179 gtcaagaaggctgagcagaagccccgggagcccaagaagaaggt 222