BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem002l01 (585 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ245642.1| Zea mays clone 18641 mRNA sequence 472 e-130 emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger pr... 438 e-119 emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribos... 416 e-113 emb|AJ314595.1|HVU314595 Hordeum vulgare mRNA for putative ribos... 367 3e-98 emb|CT829496.1| Oryza sativa (indica cultivar-group) cDNA clone:... 359 8e-96 >gb|DQ245642.1| Zea mays clone 18641 mRNA sequence Length = 647 Score = 472 bits (238), Expect = e-130 Identities = 289/306 (94%) Strand = Plus / Plus Query: 37 ggagaccagagagcgcggaacccgaccgaaccatagcctcccaccatggtgctgcagaac 96 |||||||||||||||||| ||||| | |||| ||||||||||| ||||||||||||||| Sbjct: 50 ggagaccagagagcgcggttcccgagcaaaccctagcctcccacgatggtgctgcagaac 109 Query: 97 gacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaagcgc 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 gacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaagcgc 169 Query: 157 ctcgtccagtcccccaactccttcttcatggacgtcaagtgccagggctgcttcaacatc 216 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 ctcgtccagtcccccaattccttcttcatggacgtcaagtgccagggctgcttcaacatc 229 Query: 217 actactgtgttcagccactcccagaccgtggtggtgtgcgcaggctgccaaaccgtgctc 276 |||||||||||||||||||| ||||| || ||||||||| ||||||||||||| |||||| Sbjct: 230 actactgtgttcagccactcacagactgttgtggtgtgcccaggctgccaaacagtgctc 289 Query: 277 tgccagcctacgggtggaaaggcgaggctgaccgagggatgctccttccgccgcaagggc 336 |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 290 tgccagccaacgggtggtaaggccaggctcaccgagggttgctccttccgccgcaagggc 349 Query: 337 gactaa 342 |||||| Sbjct: 350 gactaa 355 >emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger protein Length = 493 Score = 438 bits (221), Expect = e-119 Identities = 260/273 (95%) Strand = Plus / Plus Query: 70 tagcctcccaccatggtgctgcagaacgacatcgacctgctgaacccgccggcggagctc 129 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 tagcctcccacgatggtgctgcagaacgacatcgacctgctgaacccgccggcggagctc 82 Query: 130 gagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggac 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83 gagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggac 142 Query: 190 gtcaagtgccagggctgcttcaacatcactactgtgttcagccactcccagaccgtggtg 249 |||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 143 gtcaagtgccagggctgcttcaacatcactactgtgttcagccattcccagactgttgtg 202 Query: 250 gtgtgcgcaggctgccaaaccgtgctctgccagcctacgggtggaaaggcgaggctgacc 309 |||||| |||||||||| || |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 203 gtgtgcccaggctgccagacggtgctctgccagccaacgggtggcaaggccaggctaacc 262 Query: 310 gagggatgctccttccgccgcaagggcgactaa 342 ||||| ||||||||||| ||||||||||||||| Sbjct: 263 gagggttgctccttccgtcgcaagggcgactaa 295 >emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27A gene) Length = 596 Score = 416 bits (210), Expect = e-113 Identities = 261/278 (93%) Strand = Plus / Plus Query: 65 aaccatagcctcccaccatggtgctgcagaacgacatcgacctgctgaacccgccggcgg 124 |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 50 aaccctagcctcccacgatggtgctgcagaacgacatcgacctgctcaacccgccggccg 109 Query: 125 agctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactccttcttca 184 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110 agctcgagaagctcaagcacaagaagaagcgcctcgtccagtcccccaactctttcttca 169 Query: 185 tggacgtcaagtgccagggctgcttcaacatcactactgtgttcagccactcccagaccg 244 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 170 tggacgtcaagtgccagggttgcttcaacatcactactgtgttcagccactcccagactg 229 Query: 245 tggtggtgtgcgcaggctgccaaaccgtgctctgccagcctacgggtggaaaggcgaggc 304 | ||||||||| ||||||||||||| |||||||||||||| || ||||| ||||| |||| Sbjct: 230 tcgtggtgtgcccaggctgccaaacagtgctctgccagccaaccggtggcaaggccaggc 289 Query: 305 tgaccgagggatgctccttccgccgcaagggcgactaa 342 | || ||||| ||||||||||||||||||||||||||| Sbjct: 290 taactgagggctgctccttccgccgcaagggcgactaa 327 >emb|AJ314595.1|HVU314595 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27C gene) Length = 521 Score = 367 bits (185), Expect = 3e-98 Identities = 242/261 (92%) Strand = Plus / Plus Query: 82 atggtgctgcagaacgacatcgacctgctgaacccgccggcggagctcgagaagctcaag 141 |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 86 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 145 Query: 142 cacaagaagaagcgcctcgtccagtcccccaactccttcttcatggacgtcaagtgccag 201 |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| Sbjct: 146 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 205 Query: 202 ggctgcttcaacatcactactgtgttcagccactcccagaccgtggtggtgtgcgcaggc 261 |||||||||||||| || ||||||||||||||||| |||||||||||||||||| | ||| Sbjct: 206 ggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccgggc 265 Query: 262 tgccaaaccgtgctctgccagcctacgggtggaaaggcgaggctgaccgagggatgctcc 321 ||||| || ||||||||||| || || ||||||||||||||||| ||||||||||||||| Sbjct: 266 tgccagacggtgctctgccaacccaccggtggaaaggcgaggctcaccgagggatgctcc 325 Query: 322 ttccgccgcaagggcgactaa 342 |||||||| ||||| |||||| Sbjct: 326 ttccgccggaagggtgactaa 346 >emb|CT829496.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI030C13, full insert sequence Length = 467 Score = 359 bits (181), Expect = 8e-96 Identities = 232/249 (93%) Strand = Plus / Plus Query: 93 gaacgacatcgacctgctgaacccgccggcggagctcgagaagctcaagcacaagaagaa 152 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 97 gaacgacatcgacctgctgaacccgccggcggagctggagaagctcaagcacaagaagaa 156 Query: 153 gcgcctcgtccagtcccccaactccttcttcatggacgtcaagtgccagggctgcttcaa 212 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 157 gcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgccagggctgcttcaa 216 Query: 213 catcactactgtgttcagccactcccagaccgtggtggtgtgcgcaggctgccaaaccgt 272 ||| || ||||| ||||||||||||||||||||||| |||||| | |||||||| ||||| Sbjct: 217 cataacgactgtattcagccactcccagaccgtggttgtgtgcccgggctgccagaccgt 276 Query: 273 gctctgccagcctacgggtggaaaggcgaggctgaccgagggatgctccttccgccgcaa 332 ||||||||||||||| ||||| ||||| ||||| || ||||| |||||||||||||| || Sbjct: 277 gctctgccagcctactggtgggaaggccaggctcacggagggctgctccttccgccggaa 336 Query: 333 gggcgacta 341 | ||||||| Sbjct: 337 gagcgacta 345