BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem002j12
         (506 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY107145.1| Zea mays PCO097814 mRNA sequence                       216   6e-53
ref|NM_001061471.1| Oryza sativa (japonica cultivar-group) Os05g...   149   1e-32
dbj|AK062517.1| Oryza sativa (japonica cultivar-group) cDNA clon...   149   1e-32
emb|CT833388.1| Oryza sativa (indica cultivar-group) cDNA clone:...   135   2e-28
gb|DQ244673.1| Zea mays clone 9993 mRNA sequence                      125   2e-25

>gb|AY107145.1| Zea mays PCO097814 mRNA sequence
          Length = 426

 Score =  216 bits (109), Expect = 6e-53
 Identities = 162/180 (90%), Gaps = 6/180 (3%)
 Strand = Plus / Plus

                                                                       
Query: 108 tcgtcttcgccatcgccatgccggccgtcgcc------gcgcaggcccccgcgccggcgc 161
           ||||||||||||||||| ||||||||||||||      |||||||||||||| |||||||
Sbjct: 106 tcgtcttcgccatcgccgtgccggccgtcgccgccgccgcgcaggcccccgccccggcgc 165

                                                                       
Query: 162 ccaccagcgacggaacgtcgattgaccaaggcatcgcctacctgctgatgatcgtggcgc 221
           ||||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||
Sbjct: 166 ccaccagcgacgggacgtcgattgaccagggcatcgcgtacctgctgatgatcatggcgc 225

                                                                       
Query: 222 tggtgctgacctacctcatccacccgttggacgcctcctccctttacaagctcttctgag 281
           ||||||| |||||||||||||||||  ||||||||||| |||  ||||||||||||||||
Sbjct: 226 tggtgctcacctacctcatccaccctctggacgcctccgccccgtacaagctcttctgag 285


>ref|NM_001061471.1| Oryza sativa (japonica cultivar-group) Os05g0217000 (Os05g0217000)
           mRNA, complete cds
          Length = 459

 Score =  149 bits (75), Expect = 1e-32
 Identities = 123/139 (88%)
 Strand = Plus / Plus

                                                                       
Query: 143 caggcccccgcgccggcgcccaccagcgacggaacgtcgattgaccaaggcatcgcctac 202
           ||||| ||||||||| | |||||||||||||| |||||| | || ||||| ||||| |||
Sbjct: 119 caggcgcccgcgccgtctcccaccagcgacgggacgtcggtggatcaagggatcgcatac 178

                                                                       
Query: 203 ctgctgatgatcgtggcgctggtgctgacctacctcatccacccgttggacgcctcctcc 262
           |||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||
Sbjct: 179 ctgctgatgatcgtggcgctggtgctcacctacctcatccaccctctcgacgcctcctcc 238

                              
Query: 263 ctttacaagctcttctgag 281
              ||||||||||||||||
Sbjct: 239 gcctacaagctcttctgag 257


>dbj|AK062517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-C09, full
           insert sequence
          Length = 459

 Score =  149 bits (75), Expect = 1e-32
 Identities = 123/139 (88%)
 Strand = Plus / Plus

                                                                       
Query: 143 caggcccccgcgccggcgcccaccagcgacggaacgtcgattgaccaaggcatcgcctac 202
           ||||| ||||||||| | |||||||||||||| |||||| | || ||||| ||||| |||
Sbjct: 119 caggcgcccgcgccgtctcccaccagcgacgggacgtcggtggatcaagggatcgcatac 178

                                                                       
Query: 203 ctgctgatgatcgtggcgctggtgctgacctacctcatccacccgttggacgcctcctcc 262
           |||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||
Sbjct: 179 ctgctgatgatcgtggcgctggtgctcacctacctcatccaccctctcgacgcctcctcc 238

                              
Query: 263 ctttacaagctcttctgag 281
              ||||||||||||||||
Sbjct: 239 gcctacaagctcttctgag 257


>emb|CT833388.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN061K14, full
           insert sequence
          Length = 512

 Score =  135 bits (68), Expect = 2e-28
 Identities = 107/120 (89%)
 Strand = Plus / Plus

                                                                       
Query: 143 caggcccccgcgccggcgcccaccagcgacggaacgtcgattgaccaaggcatcgcctac 202
           ||||| ||||||||| | |||||||||||||| |||||| | || ||||| ||||| |||
Sbjct: 175 caggcgcccgcgccgtctcccaccagcgacgggacgtcggtggatcaagggatcgcatac 234

                                                                       
Query: 203 ctgctgatgatcgtggcgctggtgctgacctacctcatccacccgttggacgcctcctcc 262
           |||||||||||||||||||||||||| |||||||||||||||||  | ||||||||||||
Sbjct: 235 ctgctgatgatcgtggcgctggtgctcacctacctcatccaccctctcgacgcctcctcc 294


>gb|DQ244673.1| Zea mays clone 9993 mRNA sequence
          Length = 564

 Score =  125 bits (63), Expect = 2e-25
 Identities = 123/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 136 cgccgcgcaggcccccgcgccggcgcccaccagcgacggaacgtcgattgaccaaggcat 195
           ||||| |||| | |||||||| |||||| |||||||||| |||||||||||||| || ||
Sbjct: 197 cgccgtgcagccgcccgcgcccgcgccctccagcgacggcacgtcgattgaccagggtat 256

                                                                       
Query: 196 cgcctacctgctgatgatcgtggcgctggtgctgacctacctcatccacccgttggacgc 255
           ||| ||| |||||||| | ||||| || ||||| |||||||||||||| ||| |||||||
Sbjct: 257 cgcatacgtgctgatgctggtggcccttgtgctcacctacctcatccatccgctggacgc 316

                                  
Query: 256 ctcctccctttacaagctcttct 278
           ||||||||  |||| ||||||||
Sbjct: 317 ctcctccccatacaggctcttct 339