BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem002i20 (558 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001069033.1| Oryza sativa (japonica cultivar-group) Os08g... 180 4e-42 dbj|AK099200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42 dbj|AK060402.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 4e-42 emb|CT833436.1| Oryza sativa (indica cultivar-group) cDNA clone:... 127 5e-26 emb|CT828165.1| Oryza sativa (indica cultivar-group) cDNA clone:... 98 5e-17 >ref|NM_001069033.1| Oryza sativa (japonica cultivar-group) Os08g0558900 (Os08g0558900) mRNA, complete cds Length = 561 Score = 180 bits (91), Expect = 4e-42 Identities = 189/221 (85%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 117 atgagcgacgggaaggggcgcgtgctcagcgaggaggagcgcgccaaggagagcgtctac 176 ||||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||||| Sbjct: 198 atgagcgacggcaaggggcgcgtgctgagcgaggaggagcgggccaaggagaacgtctac 257 Query: 177 atccagaagatggagagggagaggcaggagaagctcaagaagaagctcgagcaggagaaa 236 ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| Sbjct: 258 gtccagaagatggagagggagaggatggagaagcgcaagaagaagctcgagaaggagaag 317 Query: 237 gccgaggctgaaaaggccaagcccggctcgtccgacaaggagcctca---gggatccaac 293 || ||||| || |||| ||| |||| | | ||||||||| | | | |||||||||| Sbjct: 318 gcggaggcagacaagggcaatcccgccgcctccgacaagaatacggaggggggatccaac 377 Query: 294 taggagtgatccgctactgcctgaagacgaccttgtttcac 334 |||||||||| ||| ||| ||||||||| |||||||||| Sbjct: 378 taggagtgatgtgcttctgtctgaagacggacttgtttcac 418 >dbj|AK099200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116D07, full insert sequence Length = 509 Score = 180 bits (91), Expect = 4e-42 Identities = 189/221 (85%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 117 atgagcgacgggaaggggcgcgtgctcagcgaggaggagcgcgccaaggagagcgtctac 176 ||||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||||| Sbjct: 152 atgagcgacggcaaggggcgcgtgctgagcgaggaggagcgggccaaggagaacgtctac 211 Query: 177 atccagaagatggagagggagaggcaggagaagctcaagaagaagctcgagcaggagaaa 236 ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| Sbjct: 212 gtccagaagatggagagggagaggatggagaagcgcaagaagaagctcgagaaggagaag 271 Query: 237 gccgaggctgaaaaggccaagcccggctcgtccgacaaggagcctca---gggatccaac 293 || ||||| || |||| ||| |||| | | ||||||||| | | | |||||||||| Sbjct: 272 gcggaggcagacaagggcaatcccgccgcctccgacaagaatacggaggggggatccaac 331 Query: 294 taggagtgatccgctactgcctgaagacgaccttgtttcac 334 |||||||||| ||| ||| ||||||||| |||||||||| Sbjct: 332 taggagtgatgtgcttctgtctgaagacggacttgtttcac 372 >dbj|AK060402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C04, full insert sequence Length = 561 Score = 180 bits (91), Expect = 4e-42 Identities = 189/221 (85%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 117 atgagcgacgggaaggggcgcgtgctcagcgaggaggagcgcgccaaggagagcgtctac 176 ||||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||||| Sbjct: 198 atgagcgacggcaaggggcgcgtgctgagcgaggaggagcgggccaaggagaacgtctac 257 Query: 177 atccagaagatggagagggagaggcaggagaagctcaagaagaagctcgagcaggagaaa 236 ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| Sbjct: 258 gtccagaagatggagagggagaggatggagaagcgcaagaagaagctcgagaaggagaag 317 Query: 237 gccgaggctgaaaaggccaagcccggctcgtccgacaaggagcctca---gggatccaac 293 || ||||| || |||| ||| |||| | | ||||||||| | | | |||||||||| Sbjct: 318 gcggaggcagacaagggcaatcccgccgcctccgacaagaatacggaggggggatccaac 377 Query: 294 taggagtgatccgctactgcctgaagacgaccttgtttcac 334 |||||||||| ||| ||| ||||||||| |||||||||| Sbjct: 378 taggagtgatgtgcttctgtctgaagacggacttgtttcac 418 >emb|CT833436.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA015D04, full insert sequence Length = 519 Score = 127 bits (64), Expect = 5e-26 Identities = 188/230 (81%), Gaps = 12/230 (5%) Strand = Plus / Plus Query: 117 atgagcgacgggaaggggcgcgtgctcagcgaggaggagcgcgccaaggagagcgtctac 176 ||||||||||| |||||||||||||| |||||||||||||| |||||||||| ||||||| Sbjct: 147 atgagcgacggcaaggggcgcgtgctgagcgaggaggagcgggccaaggagaacgtctac 206 Query: 177 atcca---------gaagatggagagggagaggcaggagaagctcaagaagaagctcgag 227 |||| |||||||||||||||| || |||||||| |||||||||||||||| Sbjct: 207 gtccaggtttatttgaagatggagagggagcggatggagaagcgcaagaagaagctcgag 266 Query: 228 caggagaaagccgaggctgaaaaggccaagcccggctcgtccgacaaggagcctca---g 284 ||||||| || ||||| || |||| ||| |||| | | ||||||||| | | | | Sbjct: 267 aaggagaaggcggaggcagacaagggcaatcccgccgcctccgacaagaatacggagggg 326 Query: 285 ggatccaactaggagtgatccgctactgcctgaagacgaccttgtttcac 334 ||||||||||||||||||| ||| ||| ||||||||| |||||||||| Sbjct: 327 ggatccaactaggagtgatgtgcttctgtctgaagacggacttgtttcac 376 >emb|CT828165.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA223A24, full insert sequence Length = 750 Score = 97.6 bits (49), Expect = 5e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 138 gtgctcagcgaggaggagcgcgccaaggagagcgtctacatccagaagatggagagggag 197 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 264 gtgctcagcgaggaggagcgcgccgccgagagcgtctacatacagaagatggagagggag 323 Query: 198 aggcaggagaagc 210 | || |||||||| Sbjct: 324 aagctggagaagc 336