BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem002h12
         (573 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...    82   3e-12
dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic D...    82   3e-12

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 126/153 (82%), Gaps = 6/153 (3%)
 Strand = Plus / Plus

                                                                            
Query: 173      gcggcgcggccattggagagcgaggaatgggcgggagaagccaccaccggcgac---tcc 229
                |||||||||||||||| | |  |||||||||| ||||||| |||| ||||||||   |||
Sbjct: 30800495 gcggcgcggccattggcgggacaggaatgggccggagaagacaccgccggcgacgactcc 30800554

                                                                            
Query: 230      gtcatcg---ggtttctccggcagctatatctgcaacagctgcaagggccaggtcactcc 286
                ||| |||   |||||||||||||||| ||||||||  ||||    || ||||||||||||
Sbjct: 30800555 gtcgtcgtcaggtttctccggcagctgtatctgcacaagcttgctggtccaggtcactcc 30800614

                                                 
Query: 287      tgcacgacctggaacccaaacggcggatgctga 319
                |||| |||||  | ||| |||||||||||||||
Sbjct: 30800615 tgcaagacctacagccctaacggcggatgctga 30800647


>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0487D09
          Length = 161531

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 126/153 (82%), Gaps = 6/153 (3%)
 Strand = Plus / Plus

                                                                          
Query: 173    gcggcgcggccattggagagcgaggaatgggcgggagaagccaccaccggcgac---tcc 229
              |||||||||||||||| | |  |||||||||| ||||||| |||| ||||||||   |||
Sbjct: 140642 gcggcgcggccattggcgggacaggaatgggccggagaagacaccgccggcgacgactcc 140701

                                                                          
Query: 230    gtcatcg---ggtttctccggcagctatatctgcaacagctgcaagggccaggtcactcc 286
              ||| |||   |||||||||||||||| ||||||||  ||||    || ||||||||||||
Sbjct: 140702 gtcgtcgtcaggtttctccggcagctgtatctgcacaagcttgctggtccaggtcactcc 140761

                                               
Query: 287    tgcacgacctggaacccaaacggcggatgctga 319
              |||| |||||  | ||| |||||||||||||||
Sbjct: 140762 tgcaagacctacagccctaacggcggatgctga 140794