BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem002f24
         (571 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY107794.1| Zea mays PCO062592 mRNA sequence                       161   4e-36
ref|NM_001058287.1| Oryza sativa (japonica cultivar-group) Os03g...   151   4e-33
dbj|AK058990.1| Oryza sativa (japonica cultivar-group) cDNA clon...   151   4e-33
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...   131   3e-27
gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genom...   131   3e-27

>gb|AY107794.1| Zea mays PCO062592 mRNA sequence
          Length = 506

 Score =  161 bits (81), Expect = 4e-36
 Identities = 138/157 (87%)
 Strand = Plus / Plus

                                                                       
Query: 69  gatggcggtgggggacctggtgttcaaggcgctgacggcgggcatgggcgtggcgacact 128
           |||||||||||| ||||||| |||||||||||||||||| ||  ||||||| || || ||
Sbjct: 95  gatggcggtgggcgacctggcgttcaaggcgctgacggctgggctgggcgtcgccacgct 154

                                                                       
Query: 129 ctacctggcagccactttctccgtcaacgtctaccgcggcctttcgtggcacgccgagca 188
           |||||| || ||||| |||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 155 ctacctcgccgccaccttctccgtcaacgtctaccgcggcctctcgtggcactccgagca 214

                                                
Query: 189 atccaagttagagaaagagaaaaccgaagattaaaaa 225
            |||||| |||| || | |||||||||||||| ||||
Sbjct: 215 gtccaagctagaaaaggcgaaaaccgaagattgaaaa 251


>ref|NM_001058287.1| Oryza sativa (japonica cultivar-group) Os03g0824500 (Os03g0824500)
           mRNA, complete cds
          Length = 474

 Score =  151 bits (76), Expect = 4e-33
 Identities = 133/152 (87%)
 Strand = Plus / Plus

                                                                       
Query: 59  gcgcggcggtgatggcggtgggggacctggtgttcaaggcgctgacggcgggcatgggcg 118
           ||||||||| ||||||||||| |||| ||| |||||||||||||||||||||  | || |
Sbjct: 64  gcgcggcggagatggcggtggcggacgtggcgttcaaggcgctgacggcggggctcgggg 123

                                                                       
Query: 119 tggcgacactctacctggcagccactttctccgtcaacgtctaccgcggcctttcgtggc 178
           ||||||| |||||||| || |  || |||||||||||||||||||||||||| |||||||
Sbjct: 124 tggcgacgctctacctcgccggaaccttctccgtcaacgtctaccgcggcctctcgtggc 183

                                           
Query: 179 acgccgagcaatccaagttagagaaagagaaa 210
           || | ||||||||||||||||| || ||||||
Sbjct: 184 actcggagcaatccaagttagaaaaggagaaa 215


>dbj|AK058990.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-F07, full
           insert sequence
          Length = 474

 Score =  151 bits (76), Expect = 4e-33
 Identities = 133/152 (87%)
 Strand = Plus / Plus

                                                                       
Query: 59  gcgcggcggtgatggcggtgggggacctggtgttcaaggcgctgacggcgggcatgggcg 118
           ||||||||| ||||||||||| |||| ||| |||||||||||||||||||||  | || |
Sbjct: 64  gcgcggcggagatggcggtggcggacgtggcgttcaaggcgctgacggcggggctcgggg 123

                                                                       
Query: 119 tggcgacactctacctggcagccactttctccgtcaacgtctaccgcggcctttcgtggc 178
           ||||||| |||||||| || |  || |||||||||||||||||||||||||| |||||||
Sbjct: 124 tggcgacgctctacctcgccggaaccttctccgtcaacgtctaccgcggcctctcgtggc 183

                                           
Query: 179 acgccgagcaatccaagttagagaaagagaaa 210
           || | ||||||||||||||||| || ||||||
Sbjct: 184 actcggagcaatccaagttagaaaaggagaaa 215


>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  131 bits (66), Expect = 3e-27
 Identities = 117/134 (87%)
 Strand = Plus / Minus

                                                                            
Query: 59       gcgcggcggtgatggcggtgggggacctggtgttcaaggcgctgacggcgggcatgggcg 118
                ||||||||| ||||||||||| |||| ||| |||||||||||||||||||||  | || |
Sbjct: 34421767 gcgcggcggagatggcggtggcggacgtggcgttcaaggcgctgacggcggggctcgggg 34421708

                                                                            
Query: 119      tggcgacactctacctggcagccactttctccgtcaacgtctaccgcggcctttcgtggc 178
                ||||||| |||||||| || |  || |||||||||||||||||||||||||| |||||||
Sbjct: 34421707 tggcgacgctctacctcgccggaaccttctccgtcaacgtctaccgcggcctctcgtggc 34421648

                              
Query: 179      acgccgagcaatcc 192
                || | |||||||||
Sbjct: 34421647 actcggagcaatcc 34421634


>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence,
            complete sequence
          Length = 143205

 Score =  131 bits (66), Expect = 3e-27
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                        
Query: 59   gcgcggcggtgatggcggtgggggacctggtgttcaaggcgctgacggcgggcatgggcg 118
            ||||||||| ||||||||||| |||| ||| |||||||||||||||||||||  | || |
Sbjct: 3703 gcgcggcggagatggcggtggcggacgtggcgttcaaggcgctgacggcggggctcgggg 3762

                                                                        
Query: 119  tggcgacactctacctggcagccactttctccgtcaacgtctaccgcggcctttcgtggc 178
            ||||||| |||||||| || |  || |||||||||||||||||||||||||| |||||||
Sbjct: 3763 tggcgacgctctacctcgccggaaccttctccgtcaacgtctaccgcggcctctcgtggc 3822

                          
Query: 179  acgccgagcaatcc 192
            || | |||||||||
Sbjct: 3823 actcggagcaatcc 3836