BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem002f19 (461 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050224.1| Oryza sativa (japonica cultivar-group) Os01g... 172 8e-40 dbj|AK105174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 8e-40 dbj|AK071521.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 8e-40 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27 dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27 >ref|NM_001050224.1| Oryza sativa (japonica cultivar-group) Os01g0642200 (Os01g0642200) mRNA, complete cds Length = 458 Score = 172 bits (87), Expect = 8e-40 Identities = 172/201 (85%), Gaps = 12/201 (5%) Strand = Plus / Plus Query: 60 agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119 ||||| ||||||||||| || |||||||||||||| || || |||||||| | Sbjct: 68 agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 118 Query: 120 aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179 ||||| || || |||||||||||||||||| ||||||||| | ||| |||||||||||| Sbjct: 119 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 178 Query: 180 gtcaagaagcctgagcagaagccccgggagcctaagaagaagcgggtgaagagcagcaag 239 ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 179 gtcaagaaggctgagcagaagccccgggagcccaagaagaa---ggtgaagagcagcaag 235 Query: 240 ccggcagcagccaaaaactga 260 ||||| ||||||||||||||| Sbjct: 236 ccggcggcagccaaaaactga 256 >dbj|AK105174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-H01, full insert sequence Length = 458 Score = 172 bits (87), Expect = 8e-40 Identities = 172/201 (85%), Gaps = 12/201 (5%) Strand = Plus / Plus Query: 60 agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119 ||||| ||||||||||| || |||||||||||||| || || |||||||| | Sbjct: 68 agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 118 Query: 120 aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179 ||||| || || |||||||||||||||||| ||||||||| | ||| |||||||||||| Sbjct: 119 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 178 Query: 180 gtcaagaagcctgagcagaagccccgggagcctaagaagaagcgggtgaagagcagcaag 239 ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 179 gtcaagaaggctgagcagaagccccgggagcccaagaagaa---ggtgaagagcagcaag 235 Query: 240 ccggcagcagccaaaaactga 260 ||||| ||||||||||||||| Sbjct: 236 ccggcggcagccaaaaactga 256 >dbj|AK071521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099A13, full insert sequence Length = 452 Score = 172 bits (87), Expect = 8e-40 Identities = 172/201 (85%), Gaps = 12/201 (5%) Strand = Plus / Plus Query: 60 agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119 ||||| ||||||||||| || |||||||||||||| || || |||||||| | Sbjct: 69 agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 119 Query: 120 aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179 ||||| || || |||||||||||||||||| ||||||||| | ||| |||||||||||| Sbjct: 120 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 179 Query: 180 gtcaagaagcctgagcagaagccccgggagcctaagaagaagcgggtgaagagcagcaag 239 ||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 180 gtcaagaaggctgagcagaagccccgggagcccaagaagaa---ggtgaagagcagcaag 236 Query: 240 ccggcagcagccaaaaactga 260 ||||| ||||||||||||||| Sbjct: 237 ccggcggcagccaaaaactga 257 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 131 bits (66), Expect = 3e-27 Identities = 137/162 (84%), Gaps = 9/162 (5%) Strand = Plus / Minus Query: 60 agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119 ||||| ||||||||||| || |||||||||||||| || || |||||||| | Sbjct: 25794884 agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 25794834 Query: 120 aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179 ||||| || || |||||||||||||||||| ||||||||| | ||| |||||||||||| Sbjct: 25794833 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 25794774 Query: 180 gtcaagaagcctgagcagaagccccgggagcctaagaagaag 221 ||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 25794773 gtcaagaaggctgagcagaagccccgggagcccaagaagaag 25794732 >dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 131 bits (66), Expect = 3e-27 Identities = 137/162 (84%), Gaps = 9/162 (5%) Strand = Plus / Minus Query: 60 agcataagaagaatggcatccctgaaggccgtgaagcccgctggacttgcaggacaggcc 119 ||||| ||||||||||| || |||||||||||||| || || |||||||| | Sbjct: 97348 agcatcagaagaatggcttctctgaaggccgtgaaacctgccggacttgc---------c 97298 Query: 120 aaggaacctgcagccaagctcagtgagacgaagacgaagccagtggctgccaagggcggc 179 ||||| || || |||||||||||||||||| ||||||||| | ||| |||||||||||| Sbjct: 97297 aaggagccggctgccaagctcagtgagacggcgacgaagcccgcggccgccaagggcggc 97238 Query: 180 gtcaagaagcctgagcagaagccccgggagcctaagaagaag 221 ||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 97237 gtcaagaaggctgagcagaagccccgggagcccaagaagaag 97196