BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem001g22 (398 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001067562.1| Oryza sativa (japonica cultivar-group) Os08g... 385 e-104 dbj|AK106397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-104 dbj|AK073344.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-104 emb|AJ605583.1| Oryza sativa (indica cultivar-group) mRNA for to... 377 e-101 gb|BT009565.1| Triticum aestivum clone wre1n.pk0011.b10:fis, ful... 287 2e-74 >ref|NM_001067562.1| Oryza sativa (japonica cultivar-group) Os08g0156900 (Os08g0156900) mRNA, complete cds Length = 1667 Score = 385 bits (194), Expect = e-104 Identities = 263/286 (91%) Strand = Plus / Plus Query: 1 ttggaatcatacagatatgcttgcaatgtgaaatggcttgggctaagaggagatgatctg 60 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 951 ttggaatcatacagatatgcttgcaatgtaaaatggcttggcctaagaggagatgatctg 1010 Query: 61 cagcttatccctcagagcgcattacaagagctgaagccacgtgatttgcagattgccaaa 120 |||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 1011 cagcttatacctcagagcgcatatcaagaactgaagccacgtgatctgcagattgccaaa 1070 Query: 121 agcttgctgtcatctaagtttctgcaggacaagcacagagctgaactgacactgatggtc 180 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 1071 agcttgctgtcatctaagtttctgcaggacaagcacagagctgagctgacactgatgttg 1130 Query: 181 gagatgggaaagcgtgccgagatagaagctctgtactcccatgggttcgatttcctgggg 240 |||| || |||||||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 1131 gagacaggcaagcgtgccgagatcgaagctctctactcacatgggtttgatttcctgggg 1190 Query: 241 aagtacatggcaagaaagattgtgcagggtgattacatttgacagt 286 || || | ||||| |||||||| |||||||||||||||||||||| Sbjct: 1191 aaatatgttgcaaggaagattgtacagggtgattacatttgacagt 1236 >dbj|AK106397.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-F09, full insert sequence Length = 1382 Score = 385 bits (194), Expect = e-104 Identities = 263/286 (91%) Strand = Plus / Plus Query: 1 ttggaatcatacagatatgcttgcaatgtgaaatggcttgggctaagaggagatgatctg 60 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 872 ttggaatcatacagatatgcttgcaatgtaaaatggcttggcctaagaggagatgatctg 931 Query: 61 cagcttatccctcagagcgcattacaagagctgaagccacgtgatttgcagattgccaaa 120 |||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 932 cagcttatacctcagagcgcatatcaagaactgaagccacgtgatctgcagattgccaaa 991 Query: 121 agcttgctgtcatctaagtttctgcaggacaagcacagagctgaactgacactgatggtc 180 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 992 agcttgctgtcatctaagtttctgcaggacaagcacagagctgagctgacactgatgttg 1051 Query: 181 gagatgggaaagcgtgccgagatagaagctctgtactcccatgggttcgatttcctgggg 240 |||| || |||||||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 1052 gagacaggcaagcgtgccgagatcgaagctctctactcacatgggtttgatttcctgggg 1111 Query: 241 aagtacatggcaagaaagattgtgcagggtgattacatttgacagt 286 || || | ||||| |||||||| |||||||||||||||||||||| Sbjct: 1112 aaatatgttgcaaggaagattgtacagggtgattacatttgacagt 1157 >dbj|AK073344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028J03, full insert sequence Length = 1669 Score = 385 bits (194), Expect = e-104 Identities = 263/286 (91%) Strand = Plus / Plus Query: 1 ttggaatcatacagatatgcttgcaatgtgaaatggcttgggctaagaggagatgatctg 60 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 953 ttggaatcatacagatatgcttgcaatgtaaaatggcttggcctaagaggagatgatctg 1012 Query: 61 cagcttatccctcagagcgcattacaagagctgaagccacgtgatttgcagattgccaaa 120 |||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 1013 cagcttatacctcagagcgcatatcaagaactgaagccacgtgatctgcagattgccaaa 1072 Query: 121 agcttgctgtcatctaagtttctgcaggacaagcacagagctgaactgacactgatggtc 180 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 1073 agcttgctgtcatctaagtttctgcaggacaagcacagagctgagctgacactgatgttg 1132 Query: 181 gagatgggaaagcgtgccgagatagaagctctgtactcccatgggttcgatttcctgggg 240 |||| || |||||||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 1133 gagacaggcaagcgtgccgagatcgaagctctctactcacatgggtttgatttcctgggg 1192 Query: 241 aagtacatggcaagaaagattgtgcagggtgattacatttgacagt 286 || || | ||||| |||||||| |||||||||||||||||||||| Sbjct: 1193 aaatatgttgcaaggaagattgtacagggtgattacatttgacagt 1238 >emb|AJ605583.1| Oryza sativa (indica cultivar-group) mRNA for topoisomerase 6 subunit A (top6a gene) Length = 1158 Score = 377 bits (190), Expect = e-101 Identities = 259/282 (91%) Strand = Plus / Plus Query: 1 ttggaatcatacagatatgcttgcaatgtgaaatggcttgggctaagaggagatgatctg 60 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 877 ttggaatcatacagatatgcttgcaatgtaaaatggcttggcctaagaggagatgatctg 936 Query: 61 cagcttatccctcagagcgcattacaagagctgaagccacgtgatttgcagattgccaaa 120 |||||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||| Sbjct: 937 cagcttatacctcagagcgcatatcaagaactgaagccacgtgatctgcagattgccaaa 996 Query: 121 agcttgctgtcatctaagtttctgcaggacaagcacagagctgaactgacactgatggtc 180 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 997 agcttgctgtcatctaagtttctgcaggacaagcacagagctgagctgacactgatgttg 1056 Query: 181 gagatgggaaagcgtgccgagatagaagctctgtactcccatgggttcgatttcctgggg 240 |||| || |||||||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 1057 gagacaggcaagcgtgccgagatcgaagctctctactcacatgggtttgatttcctgggg 1116 Query: 241 aagtacatggcaagaaagattgtgcagggtgattacatttga 282 || || | ||||| |||||||| |||||||||||||||||| Sbjct: 1117 aaatatgttgcaaggaagattgtacagggtgattacatttga 1158 >gb|BT009565.1| Triticum aestivum clone wre1n.pk0011.b10:fis, full insert mRNA sequence Length = 835 Score = 287 bits (145), Expect = 2e-74 Identities = 250/285 (87%) Strand = Plus / Plus Query: 1 ttggaatcatacagatatgcttgcaatgtgaaatggcttgggctaagaggagatgatctg 60 ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 351 ttggaatcatacagatacgcttgcaatgtaaaatggcttggcctaagaggagatgatctg 410 Query: 61 cagcttatccctcagagcgcattacaagagctgaagccacgtgatttgcagattgccaaa 120 || |||||||||||||| ||||| |||||| |||| || |||||||||||||| |||||| Sbjct: 411 caacttatccctcagagtgcattccaagagttgaaacctcgtgatttgcagatcgccaaa 470 Query: 121 agcttgctgtcatctaagtttctgcaggacaagcacagagctgaactgacactgatggtc 180 ||||||||||||||||||||||| ||||||| |||||| || || |||| | |||||| Sbjct: 471 agcttgctgtcatctaagtttctacaggacacgcacagggcggagttgacgcggatggtg 530 Query: 181 gagatgggaaagcgtgccgagatagaagctctgtactcccatgggttcgatttcctgggg 240 |||| || | ||||| ||||| |||||||| |||| |||||| || |||||||||||| Sbjct: 531 gagacaggcactcgtgctgagatcgaagctctctactgccatggatttgatttcctgggg 590 Query: 241 aagtacatggcaagaaagattgtgcagggtgattacatttgacag 285 |||| ||| || || ||||||||||||||||| |||||||||||| Sbjct: 591 aagttcatcgccaggaagattgtgcagggtgactacatttgacag 635