BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem001e03
         (324 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|X97771.1|HVPSII10K H.vulgare mRNA for PSII 10kD protein           287   1e-74
emb|CT837963.1| Oryza sativa (indica cultivar-group) cDNA clone:...   242   7e-61
emb|CT837962.1| Oryza sativa (indica cultivar-group) cDNA clone:...   242   7e-61
ref|NM_001065421.1| Oryza sativa (japonica cultivar-group) Os07g...   234   2e-58
dbj|AK062172.1| Oryza sativa (japonica cultivar-group) cDNA clon...   234   2e-58

>emb|X97771.1|HVPSII10K H.vulgare mRNA for PSII 10kD protein
          Length = 575

 Score =  287 bits (145), Expect = 1e-74
 Identities = 193/209 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   accagttttccaacaagtatggagcaaatgttgatgggtacagcccaatatacaccccag 60
           |||||||| || |||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 253 accagtttgccgacaagtatggagcaaatgttgatgggtacagccctatatacacaccag 312

                                                                       
Query: 61  aagaatggtcttcaagtggtgatgtttatgttggaggaaagacagggctgtttctctggg 120
           |||| |||||| ||||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct: 313 aagagtggtctccaagtggcgacgtttatgttggaggaaagacggggctgtttctctggg 372

                                                                       
Query: 121 cagtcactcttgctggaattctgctgggcggggctcttcttgtctacaatactagtgcct 180
           |||| |||||||||||||||||||||||||| |||||||||||||||| |||||| ||||
Sbjct: 373 cagtgactcttgctggaattctgctgggcggtgctcttcttgtctacagtactagcgcct 432

                                        
Query: 181 tggcttcttgaagcctaggtacagcaaac 209
           ||||||| ||||||||| || ||||||||
Sbjct: 433 tggcttcctgaagcctatgtgcagcaaac 461


>emb|CT837963.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI031O24, full
           insert sequence
          Length = 636

 Score =  242 bits (122), Expect = 7e-61
 Identities = 176/194 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   accagttttccaacaagtatggagcaaatgttgatgggtacagcccaatatacaccccag 60
           |||||||| ||| |||||||||||| ||||||||||| |||||||||||||| | |||||
Sbjct: 277 accagtttgccagcaagtatggagctaatgttgatggatacagcccaatatataacccag 336

                                                                       
Query: 61  aagaatggtcttcaagtggtgatgtttatgttggaggaaagacagggctgtttctctggg 120
           | ||||||||  ||||||||||| |||||  |||||||||||||||| |||| |||||||
Sbjct: 337 aggaatggtcaccaagtggtgatctttatactggaggaaagacagggttgttgctctggg 396

                                                                       
Query: 121 cagtcactcttgctggaattctgctgggcggggctcttcttgtctacaatactagtgcct 180
           ||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||
Sbjct: 397 cagtcactctttctggaattctgctggctggtgctcttcttgtctacaatactagtgcct 456

                         
Query: 181 tggcttcttgaagc 194
           ||||||||||||||
Sbjct: 457 tggcttcttgaagc 470


>emb|CT837962.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI011P20, full
           insert sequence
          Length = 638

 Score =  242 bits (122), Expect = 7e-61
 Identities = 176/194 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   accagttttccaacaagtatggagcaaatgttgatgggtacagcccaatatacaccccag 60
           |||||||| ||| |||||||||||| ||||||||||| |||||||||||||| | |||||
Sbjct: 279 accagtttgccagcaagtatggagctaatgttgatggatacagcccaatatataacccag 338

                                                                       
Query: 61  aagaatggtcttcaagtggtgatgtttatgttggaggaaagacagggctgtttctctggg 120
           | ||||||||  ||||||||||| |||||  |||||||||||||||| |||| |||||||
Sbjct: 339 aggaatggtcaccaagtggtgatctttatactggaggaaagacagggttgttgctctggg 398

                                                                       
Query: 121 cagtcactcttgctggaattctgctgggcggggctcttcttgtctacaatactagtgcct 180
           ||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||
Sbjct: 399 cagtcactctttctggaattctgctggctggtgctcttcttgtctacaatactagtgcct 458

                         
Query: 181 tggcttcttgaagc 194
           ||||||||||||||
Sbjct: 459 tggcttcttgaagc 472


>ref|NM_001065421.1| Oryza sativa (japonica cultivar-group) Os07g0147500 (Os07g0147500)
           mRNA, complete cds
          Length = 775

 Score =  234 bits (118), Expect = 2e-58
 Identities = 163/178 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   accagttttccaacaagtatggagcaaatgttgatgggtacagcccaatatacaccccag 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 292 accagttttccaacaagtatggagcaaatgttgatgggtacagcccaatatataccccag 351

                                                                       
Query: 61  aagaatggtcttcaagtggtgatgtttatgttggaggaaagacagggctgtttctctggg 120
           ||||||||||||||| ||||||||| ||||||||||||||| ||||  |  |||||||||
Sbjct: 352 aagaatggtcttcaactggtgatgtctatgttggaggaaaggcaggtttacttctctggg 411

                                                                     
Query: 121 cagtcactcttgctggaattctgctgggcggggctcttcttgtctacaatactagtgc 178
           || |||||||||||||||||||  | ||||| ||| ||||||||||||| ||||||||
Sbjct: 412 caatcactcttgctggaattctagttggcggcgctattcttgtctacaacactagtgc 469


>dbj|AK062172.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C07, full
           insert sequence
          Length = 620

 Score =  234 bits (118), Expect = 2e-58
 Identities = 163/178 (91%)
 Strand = Plus / Plus

                                                                       
Query: 1   accagttttccaacaagtatggagcaaatgttgatgggtacagcccaatatacaccccag 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 293 accagttttccaacaagtatggagcaaatgttgatgggtacagcccaatatataccccag 352

                                                                       
Query: 61  aagaatggtcttcaagtggtgatgtttatgttggaggaaagacagggctgtttctctggg 120
           ||||||||||||||| ||||||||| ||||||||||||||| ||||  |  |||||||||
Sbjct: 353 aagaatggtcttcaactggtgatgtctatgttggaggaaaggcaggtttacttctctggg 412

                                                                     
Query: 121 cagtcactcttgctggaattctgctgggcggggctcttcttgtctacaatactagtgc 178
           || |||||||||||||||||||  | ||||| ||| ||||||||||||| ||||||||
Sbjct: 413 caatcactcttgctggaattctagttggcggcgctattcttgtctacaacactagtgc 470