BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem001b11
         (438 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001054725.1| Oryza sativa (japonica cultivar-group) Os02g...   303   3e-79
dbj|AK062958.1| Oryza sativa (japonica cultivar-group) cDNA clon...   303   3e-79
gb|AY109403.1| Zea mays CL683_1 mRNA sequence                         285   7e-74
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...   135   2e-28
dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic D...   135   2e-28

>ref|NM_001054725.1| Oryza sativa (japonica cultivar-group) Os02g0760500 (Os02g0760500)
           mRNA, complete cds
          Length = 988

 Score =  303 bits (153), Expect = 3e-79
 Identities = 231/257 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagcggccgatcacgcaggcgatcctggaccacgcgctcaagatttgttccgagaagaat 60
           ||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 386 cagcggcggatcacgcaggctatcctggatcacgcgctcaagatttgctccgagaagaat 445

                                                                       
Query: 61  gtggaggtgaagacggaggtggtggtgggggatcccaaggagaagatctgcgaggtgacg 120
           ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 446 gtggaggtgaagacggatgtggtcgttggggatcctaaggagaagatctgcgaggtgacg 505

                                                                       
Query: 121 gccaacctcaagaccgacctgcttgtcatggggtgccgtgctattgggccgctccagagg 180
           || || |||||| |||| ||||| |||||||||||||||||| |||| || ||| |||| 
Sbjct: 506 gcaaatctcaaggccgatctgctcgtcatggggtgccgtgcttttggccccctcaagaga 565

                                                                       
Query: 181 atgttcttgggcagtgtgagcaattactgcatcaacaatgtgggctgccctgttgttgta 240
           |||||||| || ||||||||||| ||||||||||||||||||| ||| || |||||||||
Sbjct: 566 atgttcttaggaagtgtgagcaactactgcatcaacaatgtggtctgtccagttgttgta 625

                            
Query: 241 atcaagggtacttgagc 257
           ||||| || ||||||||
Sbjct: 626 atcaaaggcacttgagc 642


>dbj|AK062958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-D03, full
           insert sequence
          Length = 988

 Score =  303 bits (153), Expect = 3e-79
 Identities = 231/257 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagcggccgatcacgcaggcgatcctggaccacgcgctcaagatttgttccgagaagaat 60
           ||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 386 cagcggcggatcacgcaggctatcctggatcacgcgctcaagatttgctccgagaagaat 445

                                                                       
Query: 61  gtggaggtgaagacggaggtggtggtgggggatcccaaggagaagatctgcgaggtgacg 120
           ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 446 gtggaggtgaagacggatgtggtcgttggggatcctaaggagaagatctgcgaggtgacg 505

                                                                       
Query: 121 gccaacctcaagaccgacctgcttgtcatggggtgccgtgctattgggccgctccagagg 180
           || || |||||| |||| ||||| |||||||||||||||||| |||| || ||| |||| 
Sbjct: 506 gcaaatctcaaggccgatctgctcgtcatggggtgccgtgcttttggccccctcaagaga 565

                                                                       
Query: 181 atgttcttgggcagtgtgagcaattactgcatcaacaatgtgggctgccctgttgttgta 240
           |||||||| || ||||||||||| ||||||||||||||||||| ||| || |||||||||
Sbjct: 566 atgttcttaggaagtgtgagcaactactgcatcaacaatgtggtctgtccagttgttgta 625

                            
Query: 241 atcaagggtacttgagc 257
           ||||| || ||||||||
Sbjct: 626 atcaaaggcacttgagc 642


>gb|AY109403.1| Zea mays CL683_1 mRNA sequence
          Length = 1891

 Score =  285 bits (144), Expect = 7e-74
 Identities = 213/236 (90%)
 Strand = Plus / Plus

                                                                        
Query: 13   acgcaggcgatcctggaccacgcgctcaagatttgttccgagaagaatgtggaggtgaag 72
            ||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||
Sbjct: 1322 acgcaggcgatcctggagcacgccctgaagatttgttccgataagaatgtggaggtgaag 1381

                                                                        
Query: 73   acggaggtggtggtgggggatcccaaggagaagatctgcgaggtgacggccaacctcaag 132
            |||||||||||||| ||||| ||||||||||| ||||||||| |  ||||||||| ||||
Sbjct: 1382 acggaggtggtggtcggggaccccaaggagaaaatctgcgagattgcggccaaccgcaag 1441

                                                                        
Query: 133  accgacctgcttgtcatggggtgccgtgctattgggccgctccagaggatgttcttgggc 192
             |||| ||||| |||||||| |||||||| |||||||||||  ||||| |||||||||||
Sbjct: 1442 gccgatctgctcgtcatgggctgccgtgccattgggccgctaaagagggtgttcttgggc 1501

                                                                    
Query: 193  agtgtgagcaattactgcatcaacaatgtgggctgccctgttgttgtaatcaaggg 248
            ||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||
Sbjct: 1502 agtgtgagcaactactgtatcaaccatgtgggctgccctgttgttgtgatcaaggg 1557


>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  135 bits (68), Expect = 2e-28
 Identities = 107/120 (89%)
 Strand = Plus / Minus

                                                                            
Query: 61       gtggaggtgaagacggaggtggtggtgggggatcccaaggagaagatctgcgaggtgacg 120
                ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 32044972 gtggaggtgaagacggatgtggtcgttggggatcctaaggagaagatctgcgaggtgacg 32044913

                                                                            
Query: 121      gccaacctcaagaccgacctgcttgtcatggggtgccgtgctattgggccgctccagagg 180
                || || |||||| |||| ||||| |||||||||||||||||| |||| || ||| |||||
Sbjct: 32044912 gcaaatctcaaggccgatctgctcgtcatggggtgccgtgcttttggccccctcaagagg 32044853



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                            
Query: 1        cagcggccgatcacgcaggcgatcctggaccacgcgctcaagatttgttccgagaagaat 60
                ||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 32045120 cagcggcggatcacgcaggctatcctggatcacgcgctcaagatttgctccgagaagaat 32045061

                  
Query: 61       gt 62
                ||
Sbjct: 32045060 gt 32045059



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                            
Query: 181      atgttcttgggcagtgtgagcaattactgcatcaacaatgtgggctgccctgttgttgta 240
                |||||||| || ||||||||||| ||||||||||||||||||| ||| || |||||||||
Sbjct: 32042237 atgttcttaggaagtgtgagcaactactgcatcaacaatgtggtctgtccagttgttgta 32042178

                                 
Query: 241      atcaagggtacttgagc 257
                ||||| || ||||||||
Sbjct: 32042177 atcaaaggcacttgagc 32042161


>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1175_B01
          Length = 96191

 Score =  135 bits (68), Expect = 2e-28
 Identities = 107/120 (89%)
 Strand = Plus / Minus

                                                                         
Query: 61    gtggaggtgaagacggaggtggtggtgggggatcccaaggagaagatctgcgaggtgacg 120
             ||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||
Sbjct: 65347 gtggaggtgaagacggatgtggtcgttggggatcctaaggagaagatctgcgaggtgacg 65288

                                                                         
Query: 121   gccaacctcaagaccgacctgcttgtcatggggtgccgtgctattgggccgctccagagg 180
             || || |||||| |||| ||||| |||||||||||||||||| |||| || ||| |||||
Sbjct: 65287 gcaaatctcaaggccgatctgctcgtcatggggtgccgtgcttttggccccctcaagagg 65228



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 58/62 (93%)
 Strand = Plus / Minus

                                                                         
Query: 1     cagcggccgatcacgcaggcgatcctggaccacgcgctcaagatttgttccgagaagaat 60
             ||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct: 65495 cagcggcggatcacgcaggctatcctggatcacgcgctcaagatttgctccgagaagaat 65436

               
Query: 61    gt 62
             ||
Sbjct: 65435 gt 65434



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 181   atgttcttgggcagtgtgagcaattactgcatcaacaatgtgggctgccctgttgttgta 240
             |||||||| || ||||||||||| ||||||||||||||||||| ||| || |||||||||
Sbjct: 62612 atgttcttaggaagtgtgagcaactactgcatcaacaatgtggtctgtccagttgttgta 62553

                              
Query: 241   atcaagggtacttgagc 257
             ||||| || ||||||||
Sbjct: 62552 atcaaaggcacttgagc 62536