BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bbasst002m16 (663 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY104933.1| Zea mays PCO102315 mRNA sequence 307 3e-80 gb|U62753.1|ZMU62753 Zea mays acidic ribosomal protein P2b (rpp2... 307 3e-80 gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, ... 246 1e-61 gb|DQ244316.1| Zea mays clone 4777 mRNA sequence 232 1e-57 ref|NM_001062218.1| Oryza sativa (japonica cultivar-group) Os05g... 208 2e-50 >gb|AY104933.1| Zea mays PCO102315 mRNA sequence Length = 711 Score = 307 bits (155), Expect = 3e-80 Identities = 304/354 (85%), Gaps = 6/354 (1%) Strand = Plus / Plus Query: 86 agttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaa 145 ||||| || ||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 59 agtttccaggatgaaggtaatagctgcctacctgcttgctgttctgggtggaaacacttc 118 Query: 146 accaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaaga 205 || ||||||||||| ||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct: 119 cccgactgctgatgatgttaagagcattctggaatcagttggtgctgaagctgatgaaga 178 Query: 206 caggctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgattgcagc 265 | || |||| ||||||| | ||||| ||||| |||||||||||||||||||||||||| Sbjct: 179 aaaactagagttcctgctcacagaactcaaagacaaggacataacagaagtgattgcagc 238 Query: 266 tggaagggagaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggcagctcc 325 ||||||||| | ||| ||||||||||||||||||| |||||||| | | ||| |||||| Sbjct: 239 tggaagggaaaggttatcctctgtgccttcaggtggtggtgcaattgacatgggagctcc 298 Query: 326 agctggtggtggtggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggagga 385 ||| | || | ||| ||||| | |||||||||||||||||||||||||||| || Sbjct: 299 agcagctgtagctggcggtggcg------cagcacctgctgaagaggcaaagaaggaaga 352 Query: 386 gaaagttgaagagaaggaagaatctgatgacgatatgggtttcagtttgttcga 439 || ||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 353 aaaggttgaagagaaggaagagtctgatgaagatatgggtttcagcttgttcga 406 >gb|U62753.1|ZMU62753 Zea mays acidic ribosomal protein P2b (rpp2b) mRNA, complete cds Length = 600 Score = 307 bits (155), Expect = 3e-80 Identities = 304/354 (85%), Gaps = 6/354 (1%) Strand = Plus / Plus Query: 86 agttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaa 145 ||||| || ||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 35 agtttccaggatgaaggtaatagctgcctacctgcttgctgttctgggtggaaacacttc 94 Query: 146 accaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaaga 205 || ||||||||||| ||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct: 95 cccgactgctgatgatgttaagagcattctggaatcagttggtgctgaagctgatgaaga 154 Query: 206 caggctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgattgcagc 265 | || |||| ||||||| | ||||| ||||| |||||||||||||||||||||||||| Sbjct: 155 aaaactagagttcctgctcacagaactcaaagacaaggacataacagaagtgattgcagc 214 Query: 266 tggaagggagaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggcagctcc 325 ||||||||| | ||| ||||||||||||||||||| |||||||| | | ||| |||||| Sbjct: 215 tggaagggaaaggttatcctctgtgccttcaggtggtggtgcaattgacatgggagctcc 274 Query: 326 agctggtggtggtggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggagga 385 ||| | || | ||| ||||| | |||||||||||||||||||||||||||| || Sbjct: 275 agcagctgtagctggcggtggcg------cagcacctgctgaagaggcaaagaaggaaga 328 Query: 386 gaaagttgaagagaaggaagaatctgatgacgatatgggtttcagtttgttcga 439 || ||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 329 aaaggttgaagagaaggaagagtctgatgaagatatgggtttcagcttgttcga 382 >gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, partial cds Length = 417 Score = 246 bits (124), Expect = 1e-61 Identities = 297/355 (83%), Gaps = 6/355 (1%) Strand = Plus / Plus Query: 87 gttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaaa 146 |||| |||||||||| |||||||||||||||| || || ||| ||||| ||| || Sbjct: 67 gtttccacgatgaagctgatcgctgcctacctcctcgcctatcttggtgggaactcttcc 126 Query: 147 ccaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaagac 206 |||| ||| | ||| || || ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 127 ccaagtgccgctgatgtcaagaacatcctggactcagttggtgctgaggctgatgaagaa 186 Query: 207 aggctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgattgcagct 266 | ||| |||| ||| || |||||||| |||| |||||||| ||||||||||||||| || Sbjct: 187 aagcttgagttccttcttgctgaactgaaaggcaaggacatcacagaagtgattgcatct 246 Query: 267 ggaagggagaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggcagctcca 326 |||||||||||||||||| |||||||||||||||| ||||| || || |||| ||||||| Sbjct: 247 ggaagggagaagtttgccgctgtgccttcaggtgggggtgccattgctgtgggagctcca 306 Query: 327 gctggtggtggtggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggaggag 386 |||| || ||||| |||| ||||||||||||| ||| |||||||||||||| Sbjct: 307 gctgctgcatctggtg------gtggcgcagcacctgctgctgagtcaaagaaggaggag 360 Query: 387 aaagttgaagagaaggaagaatctgatgacgatatgggtttcagtttgttcgact 441 || |||||||||||||||||||||||||| || |||||||||||| ||||||||| Sbjct: 361 aaggttgaagagaaggaagaatctgatgaagacatgggtttcagtctgttcgact 415 >gb|DQ244316.1| Zea mays clone 4777 mRNA sequence Length = 617 Score = 232 bits (117), Expect = 1e-57 Identities = 198/225 (88%) Strand = Plus / Plus Query: 86 agttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaa 145 ||||| || ||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 9 agtttccaggatgaaggtaatagctgcctacctgcttgctgttctgggtggaaacacttc 68 Query: 146 accaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaaga 205 || ||||||||||| ||||| | ||| |||||||||||||| ||||||||||||||||| Sbjct: 69 cccgactgctgatgatgttaagagcattctggaatcagttggtgctgaagctgatgaaga 128 Query: 206 caggctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgattgcagc 265 | || |||| ||||||| | ||||| ||||| |||||||||||||||||||||||||| Sbjct: 129 aaaactagagttcctgctcacagaactcaaagacaaggacataacagaagtgattgcagc 188 Query: 266 tggaagggagaagtttgcctctgtgccttcaggtggcggtgcaat 310 ||||||||| | ||| ||||||||||||||||||| |||||||| Sbjct: 189 tggaagggaaaggttatcctctgtgccttcaggtggtggtgcaat 233 Score = 127 bits (64), Expect = 6e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 348 ggtggtgcagcacctgctgaagaggcaaagaaggaggagaaagttgaagagaaggaagaa 407 ||||| ||||||||||||||||||||||||||||| || || ||||||||||||||||| Sbjct: 265 ggtggcgcagcacctgctgaagaggcaaagaaggaagaaaaggttgaagagaaggaagag 324 Query: 408 tctgatgacgatatgggtttcagtttgttcga 439 |||||||| |||||||||||||| |||||||| Sbjct: 325 tctgatgaagatatgggtttcagcttgttcga 356 >ref|NM_001062218.1| Oryza sativa (japonica cultivar-group) Os05g0445500 (Os05g0445500) mRNA, complete cds Length = 781 Score = 208 bits (105), Expect = 2e-50 Identities = 189/217 (87%) Strand = Plus / Plus Query: 90 ttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaaacca 149 ||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 75 ttcacaatgaagctgatcgctgcctacctgctcgctgttctgggtggaaacacctctcca 134 Query: 150 actgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaagacagg 209 ||||||||||| |||| ||||| |||||||||||||| | ||||||| |||| || ||| Sbjct: 135 tctgctgatgacattaagaacattctggaatcagttggcgttgaagctaatgacgagagg 194 Query: 210 ctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgattgcagctgga 269 ||||||| ||||||| | ||||| | | ||||||||||||||||||||||| |||||| Sbjct: 195 ctggagttcctgctctcagaactggagggcaaggacataacagaagtgattgctgctgga 254 Query: 270 agggagaagtttgcctctgtgccttcaggtggcggtg 306 |||||||||||||| |||||||| |||||||| |||| Sbjct: 255 agggagaagtttgcttctgtgccctcaggtggtggtg 291 Score = 121 bits (61), Expect = 4e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 345 ggtggtggtgcagcacctgctgaagaggcaaagaaggaggagaaagttgaagagaaggaa 404 ||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||| Sbjct: 324 ggtggcggtgcagcacctgctgaagaggcaaagaaagaggagaaggtcgaagagaaggaa 383 Query: 405 gaatctgatgacgatatgggtttcagtttgttcgact 441 || |||||||| || ||||||||||| ||||| |||| Sbjct: 384 gagtctgatgatgacatgggtttcagcttgtttgact 420