BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bbasst002m15 (524 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001066659.1| Oryza sativa (japonica cultivar-group) Os07g... 190 4e-45 dbj|AK070285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 190 4e-45 gb|AY105063.1| Zea mays PCO152568 mRNA sequence 188 2e-44 gb|BT017038.1| Zea mays clone EL01N0202F05.c mRNA sequence 186 6e-44 gb|AY106489.1| Zea mays PCO155774 mRNA sequence 165 2e-37 >ref|NM_001066659.1| Oryza sativa (japonica cultivar-group) Os07g0585500 (Os07g0585500) mRNA, partial cds Length = 603 Score = 190 bits (96), Expect = 4e-45 Identities = 189/218 (86%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 102 gggtaccctccggctggctacccgccgcctcagcagggctacccgccagccggatacccc 161 |||||||| ||||| |||||||||||| | |||||||||||| || || || |||||| Sbjct: 140 gggtacccaccggccggctacccgccggc---gcagggctacccaccggctgggtacccc 196 Query: 162 c---agcagggctacccgccgccgtacgcgcagccgccgccccagcagaagcag---agc 215 | ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| Sbjct: 197 ccgcagcagggctaccctccgccgtacgcgcagccgccgccccagcagcagcagcacagc 256 Query: 216 agcgggccttccttcatgcagggatgcttggccgccgtttgctgctgctgtctcctggac 275 ||||| |||||||||||| ||||||||||||| ||| | ||||||||||||||||||||| Sbjct: 257 agcggcccttccttcatggagggatgcttggctgccctctgctgctgctgtctcctggac 316 Query: 276 gcctgcttctgagaagaaaggcgatggatacaagagag 313 ||||||||||||| | | |||||| || | |||||||| Sbjct: 317 gcctgcttctgaggatagaggcgacgggtgcaagagag 354 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 51 aagatgagctactacggccagcagccgcccgtcggcgccccgccgcagcaagggtaccc 109 ||||||||||||||||||||||| || |||||||||| ||||||||||||||| ||||| Sbjct: 56 aagatgagctactacggccagcaacctcccgtcggcgtcccgccgcagcaaggttaccc 114 >dbj|AK070285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048B07, full insert sequence Length = 606 Score = 190 bits (96), Expect = 4e-45 Identities = 189/218 (86%), Gaps = 9/218 (4%) Strand = Plus / Plus Query: 102 gggtaccctccggctggctacccgccgcctcagcagggctacccgccagccggatacccc 161 |||||||| ||||| |||||||||||| | |||||||||||| || || || |||||| Sbjct: 143 gggtacccaccggccggctacccgccggc---gcagggctacccaccggctgggtacccc 199 Query: 162 c---agcagggctacccgccgccgtacgcgcagccgccgccccagcagaagcag---agc 215 | ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||| Sbjct: 200 ccgcagcagggctaccctccgccgtacgcgcagccgccgccccagcagcagcagcacagc 259 Query: 216 agcgggccttccttcatgcagggatgcttggccgccgtttgctgctgctgtctcctggac 275 ||||| |||||||||||| ||||||||||||| ||| | ||||||||||||||||||||| Sbjct: 260 agcggcccttccttcatggagggatgcttggctgccctctgctgctgctgtctcctggac 319 Query: 276 gcctgcttctgagaagaaaggcgatggatacaagagag 313 ||||||||||||| | | |||||| || | |||||||| Sbjct: 320 gcctgcttctgaggatagaggcgacgggtgcaagagag 357 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 51 aagatgagctactacggccagcagccgcccgtcggcgccccgccgcagcaagggtaccc 109 ||||||||||||||||||||||| || |||||||||| ||||||||||||||| ||||| Sbjct: 59 aagatgagctactacggccagcaacctcccgtcggcgtcccgccgcagcaaggttaccc 117 >gb|AY105063.1| Zea mays PCO152568 mRNA sequence Length = 672 Score = 188 bits (95), Expect = 2e-44 Identities = 166/187 (88%), Gaps = 2/187 (1%) Strand = Plus / Plus Query: 102 gggtaccctccggctggctacccgccgcctcagcagggctacccgccagccggat-accc 160 |||||||| ||||| |||||||| ||||| |||||||||||||| ||| || | |||| Sbjct: 251 gggtacccgccggccggctaccccccgccggcgcagggctacccgc-agcagggttaccc 309 Query: 161 ccagcagggctacccgccgccgtacgcgcagccgccgccccagcagaagcagagcagcgg 220 ||||||||||||||||||| ||||||||||||||| || |||||| ||||||||||||| Sbjct: 310 acagcagggctacccgccgcagtacgcgcagccgcctccacagcagcagcagagcagcgg 369 Query: 221 gccttccttcatgcagggatgcttggccgccgtttgctgctgctgtctcctggacgcctg 280 ||||||||||||| | ||||||||||| ||| | ||||||||||| |||||||||||||| Sbjct: 370 gccttccttcatggaaggatgcttggctgccctctgctgctgctgcctcctggacgcctg 429 Query: 281 cttctga 287 ||||||| Sbjct: 430 cttctga 436 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 50 gaagatgagctactacggccagcagccgcccgtcggcgccccgccgcagcaagggtaccc 109 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 166 gaagatgagctactacggccagcagccccccgtcggcgtcccgccgcagcaaggctaccc 225 >gb|BT017038.1| Zea mays clone EL01N0202F05.c mRNA sequence Length = 589 Score = 186 bits (94), Expect = 6e-44 Identities = 163/186 (87%) Strand = Plus / Plus Query: 102 gggtaccctccggctggctacccgccgcctcagcagggctacccgccagccggatacccc 161 |||||||| ||||| |||||||| ||||| |||||||||||| || || ||||| Sbjct: 161 gggtacccgccggccggctaccccccgccggcgcagggctacccaccgcagggctacccg 220 Query: 162 cagcagggctacccgccgccgtacgcgcagccgccgccccagcagaagcagagcagcggg 221 ||||||||||||||||||| ||||||||||||||| || |||||| |||||||||||||| Sbjct: 221 cagcagggctacccgccgcagtacgcgcagccgcctccacagcagcagcagagcagcggg 280 Query: 222 ccttccttcatgcagggatgcttggccgccgtttgctgctgctgtctcctggacgcctgc 281 |||||||||||| | ||||||||||| ||| | ||||||||||| ||||||||||||||| Sbjct: 281 ccttccttcatggaaggatgcttggctgccctctgctgctgctgcctcctggacgcctgc 340 Query: 282 ttctga 287 |||||| Sbjct: 341 ttctga 346 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 50 gaagatgagctactacggccagcagccgcccgtcggcgccccgccgcagcaagggtaccc 109 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 76 gaagatgagctactacggccagcagccccccgtcggcgtcccgccgcagcaaggctaccc 135 >gb|AY106489.1| Zea mays PCO155774 mRNA sequence Length = 568 Score = 165 bits (83), Expect = 2e-37 Identities = 118/129 (91%), Gaps = 3/129 (2%) Strand = Plus / Minus Query: 164 gcagggctacccgccgccgtacgcgcagccgccgcccc---agcagaagcagagcagcgg 220 ||||||||||||||||| |||||||||||||||||| | ||||| ||||||||||||| Sbjct: 518 gcagggctacccgccgcagtacgcgcagccgccgcctccacagcagcagcagagcagcgg 459 Query: 221 gccttccttcatgcagggatgcttggccgccgtttgctgctgctgtctcctggacgcctg 280 ||||||||||||| ||||||||||||| ||| | ||||||||||| |||||||||||||| Sbjct: 458 gccttccttcatggagggatgcttggctgccctctgctgctgctgcctcctggacgcctg 399 Query: 281 cttctgaga 289 ||||||||| Sbjct: 398 cttctgaga 390