BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bbasst002h23 (756 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT830334.1| Oryza sativa (indica cultivar-group) cDNA clone:... 482 e-132 ref|NM_001062113.1| Oryza sativa (japonica cultivar-group) Os05g... 482 e-132 dbj|AK060267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 482 e-132 dbj|D12634.1|RICYCYTC Oryza sativa (japonica cultivar-group) mRN... 468 e-128 dbj|D21275.1|RICSS393 Oryza sativa SS393 mRNA for cytochrome c, ... 426 e-116 >emb|CT830334.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA014F10, full insert sequence Length = 736 Score = 482 bits (243), Expect = e-132 Identities = 321/347 (92%) Strand = Plus / Plus Query: 74 gcggcggcggcgatggcgtcgttctcggaggcgccccccggcaaccccaaggccggcgag 133 |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 76 gcggcggcggagatggcgtcgttctcggaggctcccccgggcaaccccaaggccggcgag 135 Query: 134 aagatcttcaggaccaagtgcgcgcagtgccacaccgtcgacaagggcgccggccacaag 193 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136 aagatcttcaagaccaagtgcgcccagtgccacaccgtcgacaagggcgccggccacaag 195 Query: 194 caaggtccaaacttgaatggcctgcttgggaggcagtcgggtactacccctggttactcc 253 |||||||||||||||||||| ||| |||| |||||||| ||||| ||||||||||| ||| Sbjct: 196 caaggtccaaacttgaatggtctgtttggaaggcagtcaggtaccacccctggttattcc 255 Query: 254 tactctgcggcaaacaagaacagggctgtgatctgggaggagaacacactgtatgattac 313 |||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||| ||| Sbjct: 256 tactctacggccaacaagaacatggctgtgatctgggaggagaacacactttatgactac 315 Query: 314 ctgcttaatcctaagaagtacattcctggaaccaagatggtcttccctggtctgaagaag 373 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 316 ctgcttaatcctaagaagtacatccctggaaccaagatggtcttccctgggttgaagaag 375 Query: 374 ccgcaggaccgtgccgatctcattgcgtacctgaaggaagccacctc 420 || ||||| ||||| ||||| ||| | |||||||||||||| ||||| Sbjct: 376 ccacaggagcgtgctgatcttatttcctacctgaaggaagcaacctc 422 >ref|NM_001062113.1| Oryza sativa (japonica cultivar-group) Os05g0420600 (Os05g0420600) mRNA, complete cds Length = 742 Score = 482 bits (243), Expect = e-132 Identities = 321/347 (92%) Strand = Plus / Plus Query: 74 gcggcggcggcgatggcgtcgttctcggaggcgccccccggcaaccccaaggccggcgag 133 |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 76 gcggcggcggagatggcgtcgttctcggaggctcccccgggcaaccccaaggccggcgag 135 Query: 134 aagatcttcaggaccaagtgcgcgcagtgccacaccgtcgacaagggcgccggccacaag 193 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136 aagatcttcaagaccaagtgcgcccagtgccacaccgtcgacaagggcgccggccacaag 195 Query: 194 caaggtccaaacttgaatggcctgcttgggaggcagtcgggtactacccctggttactcc 253 |||||||||||||||||||| ||| |||| |||||||| ||||| ||||||||||| ||| Sbjct: 196 caaggtccaaacttgaatggtctgtttggaaggcagtcaggtaccacccctggttattcc 255 Query: 254 tactctgcggcaaacaagaacagggctgtgatctgggaggagaacacactgtatgattac 313 |||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||| ||| Sbjct: 256 tactctacggccaacaagaacatggctgtgatctgggaggagaacacactttatgactac 315 Query: 314 ctgcttaatcctaagaagtacattcctggaaccaagatggtcttccctggtctgaagaag 373 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 316 ctgcttaatcctaagaagtacatccctggaaccaagatggtcttccctgggttgaagaag 375 Query: 374 ccgcaggaccgtgccgatctcattgcgtacctgaaggaagccacctc 420 || ||||| ||||| ||||| ||| | |||||||||||||| ||||| Sbjct: 376 ccacaggagcgtgctgatcttatttcctacctgaaggaagcaacctc 422 >dbj|AK060267.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-D04, full insert sequence Length = 742 Score = 482 bits (243), Expect = e-132 Identities = 321/347 (92%) Strand = Plus / Plus Query: 74 gcggcggcggcgatggcgtcgttctcggaggcgccccccggcaaccccaaggccggcgag 133 |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 76 gcggcggcggagatggcgtcgttctcggaggctcccccgggcaaccccaaggccggcgag 135 Query: 134 aagatcttcaggaccaagtgcgcgcagtgccacaccgtcgacaagggcgccggccacaag 193 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136 aagatcttcaagaccaagtgcgcccagtgccacaccgtcgacaagggcgccggccacaag 195 Query: 194 caaggtccaaacttgaatggcctgcttgggaggcagtcgggtactacccctggttactcc 253 |||||||||||||||||||| ||| |||| |||||||| ||||| ||||||||||| ||| Sbjct: 196 caaggtccaaacttgaatggtctgtttggaaggcagtcaggtaccacccctggttattcc 255 Query: 254 tactctgcggcaaacaagaacagggctgtgatctgggaggagaacacactgtatgattac 313 |||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||| ||| Sbjct: 256 tactctacggccaacaagaacatggctgtgatctgggaggagaacacactttatgactac 315 Query: 314 ctgcttaatcctaagaagtacattcctggaaccaagatggtcttccctggtctgaagaag 373 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 316 ctgcttaatcctaagaagtacatccctggaaccaagatggtcttccctgggttgaagaag 375 Query: 374 ccgcaggaccgtgccgatctcattgcgtacctgaaggaagccacctc 420 || ||||| ||||| ||||| ||| | |||||||||||||| ||||| Sbjct: 376 ccacaggagcgtgctgatcttatttcctacctgaaggaagcaacctc 422 >dbj|D12634.1|RICYCYTC Oryza sativa (japonica cultivar-group) mRNA for cytochrome C, complete cds Length = 654 Score = 468 bits (236), Expect = e-128 Identities = 311/336 (92%) Strand = Plus / Plus Query: 85 gatggcgtcgttctcggaggcgccccccggcaaccccaaggccggcgagaagatcttcag 144 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 5 gatggcgtcgttctcggaggctcccccgggcaaccccaaggccggcgagaagatcttcaa 64 Query: 145 gaccaagtgcgcgcagtgccacaccgtcgacaagggcgccggccacaagcaaggtccaaa 204 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gaccaagtgcgcccagtgccacaccgtcgacaagggcgccggccacaagcaaggtccaaa 124 Query: 205 cttgaatggcctgcttgggaggcagtcgggtactacccctggttactcctactctgcggc 264 ||||||||| ||| |||| |||||||| ||||| ||||||||||| ||||||||| |||| Sbjct: 125 cttgaatggtctgtttggaaggcagtcaggtaccacccctggttattcctactctacggc 184 Query: 265 aaacaagaacagggctgtgatctgggaggagaacacactgtatgattacctgcttaatcc 324 |||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 185 caacaagaacatggctgtgatctgggaggagaacacactttatgactacctgcttaatcc 244 Query: 325 taagaagtacattcctggaaccaagatggtcttccctggtctgaagaagccgcaggaccg 384 |||||||||||| |||||||||||||||||||||||||| |||||||||| ||||| || Sbjct: 245 taagaagtacatccctggaaccaagatggtcttccctgggttgaagaagccacaggagcg 304 Query: 385 tgccgatctcattgcgtacctgaaggaagccacctc 420 ||| ||||| ||| | |||||||||||||| ||||| Sbjct: 305 tgctgatcttatttcctacctgaaggaagcaacctc 340 >dbj|D21275.1|RICSS393 Oryza sativa SS393 mRNA for cytochrome c, partial sequence Length = 344 Score = 426 bits (215), Expect = e-116 Identities = 273/291 (93%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 74 gcggcggcggcgatggcgtcgttctcggaggcgccccccggcaaccccaaggccggcgag 133 |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 37 gcggcggcggagatggcgtcgttctcggaggctcccccgggcaaccccaaggccggcgag 96 Query: 134 aagatcttcaggaccaagtgcgcgcagtgccacaccgtcgacaagggcgccggccacaag 193 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 97 aagatcttcaagaccaagtgcgcccagtgccacaccgtcgacaagggcgccggccacaag 156 Query: 194 caaggtccaaacttgaatggcctgcttgggaggcagtcgggtactacccctggttactcc 253 |||||||||||||||||||| ||| |||| |||||||| ||||| ||||||||||| ||| Sbjct: 157 caaggtccaaacttgaatggtctgtttggaaggcagtcaggtaccacccctggttattcc 216 Query: 254 tactctgcggcaaacaagaacagggct-gtgatctgggaggagaacacactgtatgatta 312 |||||| |||| |||||||||| |||| ||||||||||||||||||||||| ||||| || Sbjct: 217 tactctacggccaacaagaacatggctngtgatctgggaggagaacacactttatgacta 276 Query: 313 cctgcttaatcctaagaagtacattcctggaaccaagatggtcttccctgg 363 |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 277 cctgcttaatcctaagaagtacatccctggaaccaagatggtcttccctgg 327