BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bbasst002g12 (723 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AF050674.1|AF050674 Oryza sativa ribosomal protein L27 precur... 618 e-174 emb|CT830118.1| Oryza sativa (indica cultivar-group) cDNA clone:... 617 e-173 ref|NM_001051779.1| Oryza sativa (japonica cultivar-group) Os01g... 617 e-173 dbj|AK061690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 617 e-173 gb|DQ244351.1| Zea mays clone 5351 mRNA sequence 531 e-147 >gb|AF050674.1|AF050674 Oryza sativa ribosomal protein L27 precursor, mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 727 Score = 618 bits (312), Expect = e-174 Identities = 411/444 (92%) Strand = Plus / Plus Query: 171 tgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagcaccaaga 230 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgccggtgcggcggctgacgatccagatggcgcacaagaagggggccgggagcaccaaga 223 Query: 231 atgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagctcgcca 290 | ||||| |||||| |||||||||||||| |||||||| | |||||||||| |||||| Sbjct: 224 acgggagggactcccccgggcagcgcctcggtgtcaagatttacggcgaccaggtcgcca 283 Query: 291 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 343 Query: 351 gaatgggcaaggatcacacactcttttctttgattgatggacttgtcaagtttgagaaat 410 ||||||||||||||||||| |||||||||||||| ||||| || || ||||| ||||||| Sbjct: 344 gaatgggcaaggatcacaccctcttttctttgatcgatggcctcgtaaagttcgagaaat 403 Query: 411 atggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgagaacccga 470 ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 404 atggaccagacaagaaaaaggtaagtgtttacccatacgagaaacaacctgagaacccaa 463 Query: 471 acagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacgcaagaaggcaa 530 |||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 464 acagttacagagcaagaaagagagagtacttccgcatgcagcgtgaacgcaaaaaggcaa 523 Query: 531 gagcagagggaactgttgaactgcaattggtattggcagctgcagatgaaaattctgagg 590 |||||||||||| |||||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 524 gagcagagggaattgttgaggtgcaattggtgttggcagctgcagatgaaagtcctgagg 583 Query: 591 tcaatgcagactgctgataagttt 614 |||||||||||||||||||||||| Sbjct: 584 tcaatgcagactgctgataagttt 607 Score = 101 bits (51), Expect = 4e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 49 ggcgtccatggcgtttacactggtgggagccttcaagggcatgtccctctcctccccgtg 108 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 15 ggcgtccatggcgttcacactggtgggagcattcaaggggatgtccctctcctccccgtg 74 Query: 109 cccctcctcct 119 || ||||||| Sbjct: 75 ccattcctcct 85 >emb|CT830118.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN039B08, full insert sequence Length = 708 Score = 617 bits (311), Expect = e-173 Identities = 410/443 (92%) Strand = Plus / Plus Query: 171 tgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagcaccaaga 230 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 165 tgccggtgcggcggctgacgatccagatggcgcacaagaagggggccgggagcaccaaga 224 Query: 231 atgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagctcgcca 290 | ||||| |||||| |||||||||||||| |||||||| | |||||||||| |||||| Sbjct: 225 acgggagggactcccccgggcagcgcctcggtgtcaagatttacggcgaccaggtcgcca 284 Query: 291 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 344 Query: 351 gaatgggcaaggatcacacactcttttctttgattgatggacttgtcaagtttgagaaat 410 ||||||||||||||||||| |||||||||||||| ||||| || || ||||| ||||||| Sbjct: 345 gaatgggcaaggatcacaccctcttttctttgatcgatggcctcgtaaagttcgagaaat 404 Query: 411 atggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgagaacccga 470 ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 405 atggaccagacaagaaaaaggtaagtgtttacccatacgagaaacaacctgagaacccaa 464 Query: 471 acagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacgcaagaaggcaa 530 |||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 465 acagttacagagcaagaaagagagagtacttccgcatgcagcgtgaacgcaaaaaggcaa 524 Query: 531 gagcagagggaactgttgaactgcaattggtattggcagctgcagatgaaaattctgagg 590 |||||||||||| |||||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 525 gagcagagggaattgttgaggtgcaattggtgttggcagctgcagatgaaagtcctgagg 584 Query: 591 tcaatgcagactgctgataagtt 613 ||||||||||||||||||||||| Sbjct: 585 tcaatgcagactgctgataagtt 607 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 49 ggcgtccatggcgtttacactggtgggagccttcaagggcatgtccctctcctccccgtg 108 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 16 ggcgtccatggcgttcacactggtgggagcattcaaggggatgtccctctcctccccgtg 75 >ref|NM_001051779.1| Oryza sativa (japonica cultivar-group) Os01g0924000 (Os01g0924000) mRNA, complete cds Length = 744 Score = 617 bits (311), Expect = e-173 Identities = 410/443 (92%) Strand = Plus / Plus Query: 171 tgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagcaccaaga 230 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 201 tgccggtgcggcggctgacgatccagatggcgcacaagaagggggccgggagcaccaaga 260 Query: 231 atgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagctcgcca 290 | ||||| |||||| |||||||||||||| |||||||| | |||||||||| |||||| Sbjct: 261 acgggagggactcccccgggcagcgcctcggtgtcaagatttacggcgaccaggtcgcca 320 Query: 291 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 380 Query: 351 gaatgggcaaggatcacacactcttttctttgattgatggacttgtcaagtttgagaaat 410 ||||||||||||||||||| |||||||||||||| ||||| || || ||||| ||||||| Sbjct: 381 gaatgggcaaggatcacaccctcttttctttgatcgatggcctcgtaaagttcgagaaat 440 Query: 411 atggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgagaacccga 470 ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 441 atggaccagacaagaaaaaggtaagtgtttacccatacgagaaacaacctgagaacccaa 500 Query: 471 acagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacgcaagaaggcaa 530 |||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 501 acagttacagagcaagaaagagagagtacttccgcatgcagcgtgaacgcaaaaaggcaa 560 Query: 531 gagcagagggaactgttgaactgcaattggtattggcagctgcagatgaaaattctgagg 590 |||||||||||| |||||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 561 gagcagagggaattgttgaggtgcaattggtgttggcagctgcagatgaaagtcctgagg 620 Query: 591 tcaatgcagactgctgataagtt 613 ||||||||||||||||||||||| Sbjct: 621 tcaatgcagactgctgataagtt 643 Score = 101 bits (51), Expect = 4e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 49 ggcgtccatggcgtttacactggtgggagccttcaagggcatgtccctctcctccccgtg 108 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 52 ggcgtccatggcgttcacactggtgggagcattcaaggggatgtccctctcctccccgtg 111 Query: 109 cccctcctcct 119 || ||||||| Sbjct: 112 ccattcctcct 122 >dbj|AK061690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B10, full insert sequence Length = 744 Score = 617 bits (311), Expect = e-173 Identities = 410/443 (92%) Strand = Plus / Plus Query: 171 tgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagcaccaaga 230 |||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 201 tgccggtgcggcggctgacgatccagatggcgcacaagaagggggccgggagcaccaaga 260 Query: 231 atgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagctcgcca 290 | ||||| |||||| |||||||||||||| |||||||| | |||||||||| |||||| Sbjct: 261 acgggagggactcccccgggcagcgcctcggtgtcaagatttacggcgaccaggtcgcca 320 Query: 291 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 agcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaataatgttg 380 Query: 351 gaatgggcaaggatcacacactcttttctttgattgatggacttgtcaagtttgagaaat 410 ||||||||||||||||||| |||||||||||||| ||||| || || ||||| ||||||| Sbjct: 381 gaatgggcaaggatcacaccctcttttctttgatcgatggcctcgtaaagttcgagaaat 440 Query: 411 atggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgagaacccga 470 ||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||| | Sbjct: 441 atggaccagacaagaaaaaggtaagtgtttacccatacgagaaacaacctgagaacccaa 500 Query: 471 acagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacgcaagaaggcaa 530 |||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||| Sbjct: 501 acagttacagagcaagaaagagagagtacttccgcatgcagcgtgaacgcaaaaaggcaa 560 Query: 531 gagcagagggaactgttgaactgcaattggtattggcagctgcagatgaaaattctgagg 590 |||||||||||| |||||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 561 gagcagagggaattgttgaggtgcaattggtgttggcagctgcagatgaaagtcctgagg 620 Query: 591 tcaatgcagactgctgataagtt 613 ||||||||||||||||||||||| Sbjct: 621 tcaatgcagactgctgataagtt 643 Score = 101 bits (51), Expect = 4e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 49 ggcgtccatggcgtttacactggtgggagccttcaagggcatgtccctctcctccccgtg 108 ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 52 ggcgtccatggcgttcacactggtgggagcattcaaggggatgtccctctcctccccgtg 111 Query: 109 cccctcctcct 119 || ||||||| Sbjct: 112 ccattcctcct 122 >gb|DQ244351.1| Zea mays clone 5351 mRNA sequence Length = 763 Score = 531 bits (268), Expect = e-147 Identities = 421/472 (89%) Strand = Plus / Plus Query: 165 tgccgctgccggcgcggcgcctgacgattcagatggcgcacaagaagggggccgggagca 224 ||||| ||||||||||||| || || || ||||||||||||||||||||||||||||||| Sbjct: 206 tgccggtgccggcgcggcggctcaccatccagatggcgcacaagaagggggccgggagca 265 Query: 225 ccaagaatgggagagactccaaggggcagcgcctcggagtcaagatattcggcgaccagc 284 ||||||| || | ||||||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 266 ccaagaacggccgcgactccaagggacagcgcctcggggtcaagatatacggcgaccagc 325 Query: 285 tcgccaagcccggcgccatcatcatccgccagcgcggcaccagggtctatcctggaaata 344 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 326 tcgccaagcccggggccatcatcatccgccagcgcggcaccagggtctatcctggaaata 385 Query: 345 atgttggaatgggcaaggatcacacactcttttctttgattgatggacttgtcaagtttg 404 | |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 386 acgttggaatgggcaaggatcacacactcttttctttgatagatggactcgtcaagtttg 445 Query: 405 agaaatatggaccggacaagaaaaaggtaagcgtttacccatatgagaaacagcctgaga 464 |||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||||| | Sbjct: 446 agaagtatgggccggacaagaaaaaggttagtgtttacccatatgagaaggagcctgaaa 505 Query: 465 acccgaacagttacagagcaaggaaaagagagtacttccgtatgcagcgtgaacgcaaga 524 |||| |||||||||||||||||||| |||||||||||||| |||| ||||||||| |||| Sbjct: 506 acccaaacagttacagagcaaggaagagagagtacttccgcatgcggcgtgaacggaaga 565 Query: 525 aggcaagagcagagggaactgttgaactgcaattggtattggcagctgcagatgaaaatt 584 |||| ||||| ||||| | | ||| | || |||||| | || |||| |||||||| | Sbjct: 566 aggcgagagcggagggcgccgctgagcctcagttggtactagctgctgttgatgaaaact 625 Query: 585 ctgaggtcaatgcagactgctgataagtttcctgtattgtacttctcttttt 636 ||||||||| || ||||||||||||||||||||| | || |||||||||| Sbjct: 626 ctgaggtcagcgcggactgctgataagtttcctgtgtggtgtttctcttttt 677