BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bbasst002f10 (685 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY104933.1| Zea mays PCO102315 mRNA sequence 325 1e-85 gb|U62753.1|ZMU62753 Zea mays acidic ribosomal protein P2b (rpp2... 325 1e-85 gb|DQ244316.1| Zea mays clone 4777 mRNA sequence 317 3e-83 gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, ... 268 3e-68 ref|NM_001062218.1| Oryza sativa (japonica cultivar-group) Os05g... 216 9e-53 >gb|AY104933.1| Zea mays PCO102315 mRNA sequence Length = 711 Score = 325 bits (164), Expect = 1e-85 Identities = 298/342 (87%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 112 gatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaaaccaactgc 171 ||||||||| || |||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 68 gatgaaggtaatagctgcctacctgcttgctgttctgggtggaaacacttccccgactgc 127 Query: 172 tgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaagacaggctgga 231 |||||| ||||| | ||| |||||||||||||| ||||||||||||||||| | || || Sbjct: 128 tgatgatgttaagagcattctggaatcagttggtgctgaagctgatgaagaaaaactaga 187 Query: 232 gttcctgctcgctgaacttaaagataaggacataacagaagtgattgcagctggaaggga 291 |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 188 gttcctgctcacagaactcaaagacaaggacataacagaagtgattgcagctggaaggga 247 Query: 292 gaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggcagctccagctggtgg 351 | ||| ||||||||||||||||||| |||||||| | | ||| ||||||||| | Sbjct: 248 aaggttatcctctgtgccttcaggtggtggtgcaattgacatgggagctccagc---agc 304 Query: 352 tggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggaggagaaagttgaaga 411 || | ||| ||||| ||||||||||||||||||||||||||||| || || |||||||| Sbjct: 305 tgtagctggcggtggcgcagcacctgctgaagaggcaaagaaggaagaaaaggttgaaga 364 Query: 412 gaaggaagaatctgatgacgatatgggtttcagtttgttcga 453 ||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 365 gaaggaagagtctgatgaagatatgggtttcagcttgttcga 406 >gb|U62753.1|ZMU62753 Zea mays acidic ribosomal protein P2b (rpp2b) mRNA, complete cds Length = 600 Score = 325 bits (164), Expect = 1e-85 Identities = 298/342 (87%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 112 gatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaaaccaactgc 171 ||||||||| || |||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 44 gatgaaggtaatagctgcctacctgcttgctgttctgggtggaaacacttccccgactgc 103 Query: 172 tgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaagacaggctgga 231 |||||| ||||| | ||| |||||||||||||| ||||||||||||||||| | || || Sbjct: 104 tgatgatgttaagagcattctggaatcagttggtgctgaagctgatgaagaaaaactaga 163 Query: 232 gttcctgctcgctgaacttaaagataaggacataacagaagtgattgcagctggaaggga 291 |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 164 gttcctgctcacagaactcaaagacaaggacataacagaagtgattgcagctggaaggga 223 Query: 292 gaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggcagctccagctggtgg 351 | ||| ||||||||||||||||||| |||||||| | | ||| ||||||||| | Sbjct: 224 aaggttatcctctgtgccttcaggtggtggtgcaattgacatgggagctccagc---agc 280 Query: 352 tggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggaggagaaagttgaaga 411 || | ||| ||||| ||||||||||||||||||||||||||||| || || |||||||| Sbjct: 281 tgtagctggcggtggcgcagcacctgctgaagaggcaaagaaggaagaaaaggttgaaga 340 Query: 412 gaaggaagaatctgatgacgatatgggtttcagtttgttcga 453 ||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 341 gaaggaagagtctgatgaagatatgggtttcagcttgttcga 382 >gb|DQ244316.1| Zea mays clone 4777 mRNA sequence Length = 617 Score = 317 bits (160), Expect = 3e-83 Identities = 297/342 (86%), Gaps = 3/342 (0%) Strand = Plus / Plus Query: 112 gatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaaaccaactgc 171 ||||||||| || |||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 18 gatgaaggtaatagctgcctacctgcttgctgttctgggtggaaacacttccccgactgc 77 Query: 172 tgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaagacaggctgga 231 |||||| ||||| | ||| |||||||||||||| ||||||||||||||||| | || || Sbjct: 78 tgatgatgttaagagcattctggaatcagttggtgctgaagctgatgaagaaaaactaga 137 Query: 232 gttcctgctcgctgaacttaaagataaggacataacagaagtgattgcagctggaaggga 291 |||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138 gttcctgctcacagaactcaaagacaaggacataacagaagtgattgcagctggaaggga 197 Query: 292 gaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggcagctccagctggtgg 351 | ||| ||||||||||||||||||| |||||||| | | | | ||||||||| | Sbjct: 198 aaggttatcctctgtgccttcaggtggtggtgcaattgacatcggagctccagc---agc 254 Query: 352 tggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggaggagaaagttgaaga 411 || | ||| ||||| ||||||||||||||||||||||||||||| || || |||||||| Sbjct: 255 tgtagctggcggtggcgcagcacctgctgaagaggcaaagaaggaagaaaaggttgaaga 314 Query: 412 gaaggaagaatctgatgacgatatgggtttcagtttgttcga 453 ||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 315 gaaggaagagtctgatgaagatatgggtttcagcttgttcga 356 >gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, partial cds Length = 417 Score = 268 bits (135), Expect = 3e-68 Identities = 302/357 (84%), Gaps = 3/357 (0%) Strand = Plus / Plus Query: 99 tctttgttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaaca 158 |||| |||| |||||||||| |||||||||||||||| || || ||| ||||| ||| Sbjct: 62 tcttggtttccacgatgaagctgatcgctgcctacctcctcgcctatcttggtgggaact 121 Query: 159 ctaaaccaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatg 218 || |||| ||| | ||| || || ||||||||||| |||||||| ||||| ||||||| Sbjct: 122 cttccccaagtgccgctgatgtcaagaacatcctggactcagttggtgctgaggctgatg 181 Query: 219 aagacaggctggagttcctgctcgctgaacttaaagataaggacataacagaagtgattg 278 |||| | ||| |||||||| || |||||||| |||| |||||||| ||||||||||||| Sbjct: 182 aagaaaagcttgagttccttcttgctgaactgaaaggcaaggacatcacagaagtgattg 241 Query: 279 cagctggaagggagaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggcag 338 || |||||||||||||||||||| |||||||||||||||| ||||| || || |||| || Sbjct: 242 catctggaagggagaagtttgccgctgtgccttcaggtgggggtgccattgctgtgggag 301 Query: 339 ctccagctggtggtggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggagg 398 ||||||| || || ||||||||| ||||||||||||| ||| |||||||||||| Sbjct: 302 ctccagc---tgctgcatctggtggtggcgcagcacctgctgctgagtcaaagaaggagg 358 Query: 399 agaaagttgaagagaaggaagaatctgatgacgatatgggtttcagtttgttcgact 455 |||| |||||||||||||||||||||||||| || |||||||||||| ||||||||| Sbjct: 359 agaaggttgaagagaaggaagaatctgatgaagacatgggtttcagtctgttcgact 415 >ref|NM_001062218.1| Oryza sativa (japonica cultivar-group) Os05g0445500 (Os05g0445500) mRNA, complete cds Length = 781 Score = 216 bits (109), Expect = 9e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 107 ttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaaacca 166 ||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 75 ttcacaatgaagctgatcgctgcctacctgctcgctgttctgggtggaaacacctctcca 134 Query: 167 actgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaagacagg 226 ||||||||||| |||| ||||| |||||||||||||| | ||||||| |||| || ||| Sbjct: 135 tctgctgatgacattaagaacattctggaatcagttggcgttgaagctaatgacgagagg 194 Query: 227 ctggagttcctgctcgctgaacttaaagataaggacataacagaagtgattgcagctgga 286 ||||||||||||||| | ||||| | | ||||||||||||||||||||||| |||||| Sbjct: 195 ctggagttcctgctctcagaactggagggcaaggacataacagaagtgattgctgctgga 254 Query: 287 agggagaagtttgcctctgtgccttcaggtggcggtg 323 |||||||||||||| |||||||| |||||||| |||| Sbjct: 255 agggagaagtttgcttctgtgccctcaggtggtggtg 291 Score = 121 bits (61), Expect = 4e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 359 ggtggtggtgcagcacctgctgaagaggcaaagaaggaggagaaagttgaagagaaggaa 418 ||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||| Sbjct: 324 ggtggcggtgcagcacctgctgaagaggcaaagaaagaggagaaggtcgaagagaaggaa 383 Query: 419 gaatctgatgacgatatgggtttcagtttgttcgact 455 || |||||||| || ||||||||||| ||||| |||| Sbjct: 384 gagtctgatgatgacatgggtttcagcttgtttgact 420