BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bbasst002c07 (685 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ245979.1| Zea mays clone 93839 mRNA sequence 444 e-121 emb|Y10117.1|ZMSRP9 Z.mays mRNA for signal recognition particle ... 385 e-103 ref|NM_001063854.1| Oryza sativa (japonica cultivar-group) Os06g... 289 7e-75 dbj|AK068347.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 7e-75 gb|AY112444.1| Zea mays CL1900_1 mRNA sequence 274 4e-70 >gb|DQ245979.1| Zea mays clone 93839 mRNA sequence Length = 689 Score = 444 bits (224), Expect = e-121 Identities = 299/324 (92%) Strand = Plus / Plus Query: 102 cgccgcagcgatggtgtacttcgattcatgggacgagttcgtcgaccggtccgtgcagct 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 cgccgcagcgatggtgtacttcgattcatgggacgagttcgtcgaccggtccgtgcagct 136 Query: 162 cttccgcgccgaccccaccgccacccgctacgtggtcaagtaccggcactgcgaggggaa 221 ||||||||||||||||| | |||| ||||| | ||||||||||||||||| ||||| Sbjct: 137 cttccgcgccgaccccatcaccactcgctattgtatgaagtaccggcactgcgacgggaa 196 Query: 222 gctcgtgctcaaggtcaccgacgaccgcgagtgcttgaagtttaagacagatcaagctca 281 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 197 gctcgtgctcaaggtcaccgacgaccgcgagtgcctgaagtttaagactgatcaagctca 256 Query: 282 ggatgcaaagaagatggaaaagctgaacactatcttttttgctctcatgactcgtggacc 341 ||| |||||||||||||| ||||| |||| |||||||| |||||||||||||||||||| Sbjct: 257 ggacgcaaagaagatggagaagcttaacaacatctttttcgctctcatgactcgtggacc 316 Query: 342 tgatgctgatataagtgatgtttcggggaaggaacaggcagaacaacagcaatcaaagaa 401 ||||||||||||||| || ||||| |||||||||||||| || || |||||||||||||| Sbjct: 317 tgatgctgatataagcgaggtttcagggaaggaacaggcggagcagcagcaatcaaagaa 376 Query: 402 aggacggggcaggaggcagtagta 425 ||||||||||||||||||||||| Sbjct: 377 gggacggggcaggaggcagtagta 400 >emb|Y10117.1|ZMSRP9 Z.mays mRNA for signal recognition particle subunit 9 Length = 765 Score = 385 bits (194), Expect = e-103 Identities = 281/310 (90%) Strand = Plus / Plus Query: 110 cgatggtgtacttcgattcatgggacgagttcgtcgaccggtccgtgcagctcttccgcg 169 ||||||||||| | ||||| ||||| |||||||| || || ||||||||||||||||||| Sbjct: 110 cgatggtgtacgtggattcttgggaggagttcgtggagcgttccgtgcagctcttccgcg 169 Query: 170 ccgaccccaccgccacccgctacgtggtcaagtaccggcactgcgaggggaagctcgtgc 229 |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 170 gcgaccccaacgccacccgctacgtgatgaagtaccggcactgcgaggggaagctcgtgc 229 Query: 230 tcaaggtcaccgacgaccgcgagtgcttgaagtttaagacagatcaagctcaggatgcaa 289 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 230 tcaaggtcaccgacgaccgcgagtgcttgaagttcaagacagatcaagctcaagacgcaa 289 Query: 290 agaagatggaaaagctgaacactatcttttttgctctcatgactcgtggacctgatgctg 349 |||||||||| ||||| |||| |||||||||||||||||||| ||||| ||||||| || Sbjct: 290 agaagatggagaagctcaacaacatcttttttgctctcatgacacgtgggcctgatgttg 349 Query: 350 atataagtgatgtttcggggaaggaacaggcagaacaacagcaatcaaagaaaggacggg 409 |||| ||||| ||||| ||||||||||||||||| ||||||||| | |||||||| |||| Sbjct: 350 atatcagtgaagtttcagggaaggaacaggcagagcaacagcaagcgaagaaaggtcggg 409 Query: 410 gcaggaggca 419 | |||||||| Sbjct: 410 gaaggaggca 419 >ref|NM_001063854.1| Oryza sativa (japonica cultivar-group) Os06g0257200 (Os06g0257200) mRNA, partial cds Length = 3411 Score = 289 bits (146), Expect = 7e-75 Identities = 167/174 (95%) Strand = Plus / Plus Query: 251 agtgcttgaagtttaagacagatcaagctcaggatgcaaagaagatggaaaagctgaaca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3048 agtgcttgaagtttaagacagatcaagctcaggatgcaaagaagatggaaaaactgaaca 3107 Query: 311 ctatcttttttgctctcatgactcgtggacctgatgctgatataagtgatgtttcgggga 370 | || |||||| |||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 3108 ccattttttttactctcatgacccatggacctgatgctgatataagtgatgtttcgggga 3167 Query: 371 aggaacaggcagaacaacagcaatcaaagaaaggacggggcaggaggcagtagt 424 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3168 aggaacaggcagaacaacagcaatcaaagaaaggccggggcaggaggcagtagt 3221 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 184 acccgctacgtggtcaagtaccggcactgcgaggggaagctcgtgctcaaggtcaccgac 243 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 340 acccgctacgttgtcaagtaccggcactgcgaagggaagctcgtgctcaaggtcaccgac 399 Query: 244 gaccgcgag 252 ||| |||| Sbjct: 400 aaccacgag 408 Score = 77.8 bits (39), Expect = 5e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 102 cgccgcagcgatggtgtacttcgattcatgggacgagttcgtcgaccggtccgtgcagct 161 ||||||||||||||||||||||||||| ||||||||||||||| | |||||| |||| Sbjct: 155 cgccgcagcgatggtgtacttcgattcgtgggacgagttcgtcagcaagtccgtcgagct 214 Query: 162 cttccgc 168 ||||||| Sbjct: 215 cttccgc 221 >dbj|AK068347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150F06, full insert sequence Length = 3414 Score = 289 bits (146), Expect = 7e-75 Identities = 167/174 (95%) Strand = Plus / Plus Query: 251 agtgcttgaagtttaagacagatcaagctcaggatgcaaagaagatggaaaagctgaaca 310 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3050 agtgcttgaagtttaagacagatcaagctcaggatgcaaagaagatggaaaaactgaaca 3109 Query: 311 ctatcttttttgctctcatgactcgtggacctgatgctgatataagtgatgtttcgggga 370 | || |||||| |||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 3110 ccattttttttactctcatgacccatggacctgatgctgatataagtgatgtttcgggga 3169 Query: 371 aggaacaggcagaacaacagcaatcaaagaaaggacggggcaggaggcagtagt 424 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3170 aggaacaggcagaacaacagcaatcaaagaaaggccggggcaggaggcagtagt 3223 Score = 105 bits (53), Expect = 2e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 184 acccgctacgtggtcaagtaccggcactgcgaggggaagctcgtgctcaaggtcaccgac 243 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 341 acccgctacgttgtcaagtaccggcactgcgaagggaagctcgtgctcaaggtcaccgac 400 Query: 244 gaccgcgag 252 ||| |||| Sbjct: 401 aaccacgag 409 Score = 77.8 bits (39), Expect = 5e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 102 cgccgcagcgatggtgtacttcgattcatgggacgagttcgtcgaccggtccgtgcagct 161 ||||||||||||||||||||||||||| ||||||||||||||| | |||||| |||| Sbjct: 156 cgccgcagcgatggtgtacttcgattcgtgggacgagttcgtcagcaagtccgtcgagct 215 Query: 162 cttccgc 168 ||||||| Sbjct: 216 cttccgc 222 >gb|AY112444.1| Zea mays CL1900_1 mRNA sequence Length = 747 Score = 274 bits (138), Expect = 4e-70 Identities = 177/190 (93%) Strand = Plus / Plus Query: 110 cgatggtgtacttcgattcatgggacgagttcgtcgaccggtccgtgcagctcttccgcg 169 ||||||||||| | ||||| ||||| |||||||| || |||||||||||||||||||||| Sbjct: 110 cgatggtgtacgtggattcttgggaggagttcgtggagcggtccgtgcagctcttccgcg 169 Query: 170 ccgaccccaccgccacccgctacgtggtcaagtaccggcactgcgaggggaagctcgtgc 229 |||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 170 gcgaccccaacgccacccgctacgtgatgaagtaccggcactgcgaggggaagctcgtgc 229 Query: 230 tcaaggtcaccgacgaccgcgagtgcttgaagtttaagacagatcaagctcaggatgcaa 289 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 230 tcaaggtcaccgacgaccgcgagtgcttgaagttcaagacagatcaagctcaagacgcaa 289 Query: 290 agaagatgga 299 |||||||||| Sbjct: 290 agaagatgga 299 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 348 tgatataagtgatgtttcggggaaggaacaggcagaacaacagcaatcaaagaaaggacg 407 |||||| ||||| ||||| ||||||||||||||||| ||||||||| | |||||||| || Sbjct: 348 tgatatcagtgaagtttcagggaaggaacaggcagagcaacagcaaacgaagaaaggtcg 407 Query: 408 gggcaggaggca 419 ||| |||||||| Sbjct: 408 gggaaggaggca 419