BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bbasst002b03 (670 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY104933.1| Zea mays PCO102315 mRNA sequence 321 2e-84 gb|U62753.1|ZMU62753 Zea mays acidic ribosomal protein P2b (rpp2... 321 2e-84 gb|DQ244316.1| Zea mays clone 4777 mRNA sequence 313 5e-82 gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, ... 258 3e-65 ref|NM_001062218.1| Oryza sativa (japonica cultivar-group) Os05g... 208 2e-50 >gb|AY104933.1| Zea mays PCO102315 mRNA sequence Length = 711 Score = 321 bits (162), Expect = 2e-84 Identities = 308/356 (86%), Gaps = 3/356 (0%) Strand = Plus / Plus Query: 85 tctctagttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaac 144 |||| ||||| || ||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 54 tctcgagtttccaggatgaaggtaatagctgcctacctgcttgctgttctgggtggaaac 113 Query: 145 actaaaccaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgat 204 ||| || ||||||||||| ||||| | ||| |||||||||||||| |||||||||||| Sbjct: 114 acttccccgactgctgatgatgttaagagcattctggaatcagttggtgctgaagctgat 173 Query: 205 gaagacaggctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgatt 264 ||||| | || |||| ||||||| | ||||| ||||| ||||||||||||||||||||| Sbjct: 174 gaagaaaaactagagttcctgctcacagaactcaaagacaaggacataacagaagtgatt 233 Query: 265 gcagctggaagggagaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggca 324 |||||||||||||| | ||| ||||||||||||||||||| |||||||| | | ||| | Sbjct: 234 gcagctggaagggaaaggttatcctctgtgccttcaggtggtggtgcaattgacatggga 293 Query: 325 gctccagctggtggtggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggag 384 |||||||| | || | ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 294 gctccagc---agctgtagctggcggtggcgcagcacctgctgaagaggcaaagaaggaa 350 Query: 385 gagaaagttgaagagaaggaagaatctgatgacgatatgggtttcagtttgttcga 440 || || ||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 351 gaaaaggttgaagagaaggaagagtctgatgaagatatgggtttcagcttgttcga 406 >gb|U62753.1|ZMU62753 Zea mays acidic ribosomal protein P2b (rpp2b) mRNA, complete cds Length = 600 Score = 321 bits (162), Expect = 2e-84 Identities = 308/356 (86%), Gaps = 3/356 (0%) Strand = Plus / Plus Query: 85 tctctagttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaac 144 |||| ||||| || ||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 30 tctcgagtttccaggatgaaggtaatagctgcctacctgcttgctgttctgggtggaaac 89 Query: 145 actaaaccaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgat 204 ||| || ||||||||||| ||||| | ||| |||||||||||||| |||||||||||| Sbjct: 90 acttccccgactgctgatgatgttaagagcattctggaatcagttggtgctgaagctgat 149 Query: 205 gaagacaggctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgatt 264 ||||| | || |||| ||||||| | ||||| ||||| ||||||||||||||||||||| Sbjct: 150 gaagaaaaactagagttcctgctcacagaactcaaagacaaggacataacagaagtgatt 209 Query: 265 gcagctggaagggagaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggca 324 |||||||||||||| | ||| ||||||||||||||||||| |||||||| | | ||| | Sbjct: 210 gcagctggaagggaaaggttatcctctgtgccttcaggtggtggtgcaattgacatggga 269 Query: 325 gctccagctggtggtggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggag 384 |||||||| | || | ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 270 gctccagc---agctgtagctggcggtggcgcagcacctgctgaagaggcaaagaaggaa 326 Query: 385 gagaaagttgaagagaaggaagaatctgatgacgatatgggtttcagtttgttcga 440 || || ||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 327 gaaaaggttgaagagaaggaagagtctgatgaagatatgggtttcagcttgttcga 382 >gb|DQ244316.1| Zea mays clone 4777 mRNA sequence Length = 617 Score = 313 bits (158), Expect = 5e-82 Identities = 307/356 (86%), Gaps = 3/356 (0%) Strand = Plus / Plus Query: 85 tctctagttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaac 144 |||| ||||| || ||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 4 tctcgagtttccaggatgaaggtaatagctgcctacctgcttgctgttctgggtggaaac 63 Query: 145 actaaaccaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgat 204 ||| || ||||||||||| ||||| | ||| |||||||||||||| |||||||||||| Sbjct: 64 acttccccgactgctgatgatgttaagagcattctggaatcagttggtgctgaagctgat 123 Query: 205 gaagacaggctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgatt 264 ||||| | || |||| ||||||| | ||||| ||||| ||||||||||||||||||||| Sbjct: 124 gaagaaaaactagagttcctgctcacagaactcaaagacaaggacataacagaagtgatt 183 Query: 265 gcagctggaagggagaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggca 324 |||||||||||||| | ||| ||||||||||||||||||| |||||||| | | | | | Sbjct: 184 gcagctggaagggaaaggttatcctctgtgccttcaggtggtggtgcaattgacatcgga 243 Query: 325 gctccagctggtggtggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggag 384 |||||||| | || | ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 244 gctccagc---agctgtagctggcggtggcgcagcacctgctgaagaggcaaagaaggaa 300 Query: 385 gagaaagttgaagagaaggaagaatctgatgacgatatgggtttcagtttgttcga 440 || || ||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 301 gaaaaggttgaagagaaggaagagtctgatgaagatatgggtttcagcttgttcga 356 >gb|AF475108.1| Triticum aestivum acidic ribosomal protein mRNA, partial cds Length = 417 Score = 258 bits (130), Expect = 3e-65 Identities = 297/352 (84%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 91 gttttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaaa 150 |||| |||||||||| |||||||||||||||| || || ||| ||||| ||| || Sbjct: 67 gtttccacgatgaagctgatcgctgcctacctcctcgcctatcttggtgggaactcttcc 126 Query: 151 ccaactgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaagac 210 |||| ||| | ||| || || ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 127 ccaagtgccgctgatgtcaagaacatcctggactcagttggtgctgaggctgatgaagaa 186 Query: 211 aggctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgattgcagct 270 | ||| |||| ||| || |||||||| |||| |||||||| ||||||||||||||| || Sbjct: 187 aagcttgagttccttcttgctgaactgaaaggcaaggacatcacagaagtgattgcatct 246 Query: 271 ggaagggagaagtttgcctctgtgccttcaggtggcggtgcaatcgccgtggcagctcca 330 |||||||||||||||||| |||||||||||||||| ||||| || || |||| ||||||| Sbjct: 247 ggaagggagaagtttgccgctgtgccttcaggtgggggtgccattgctgtgggagctcca 306 Query: 331 gctggtggtggtggtggtggtggtgcagcacctgctgaagaggcaaagaaggaggagaaa 390 || || || ||||||||| ||||||||||||| ||| |||||||||||||||| Sbjct: 307 gc---tgctgcatctggtggtggcgcagcacctgctgctgagtcaaagaaggaggagaag 363 Query: 391 gttgaagagaaggaagaatctgatgacgatatgggtttcagtttgttcgact 442 |||||||||||||||||||||||||| || |||||||||||| ||||||||| Sbjct: 364 gttgaagagaaggaagaatctgatgaagacatgggtttcagtctgttcgact 415 >ref|NM_001062218.1| Oryza sativa (japonica cultivar-group) Os05g0445500 (Os05g0445500) mRNA, complete cds Length = 781 Score = 208 bits (105), Expect = 2e-50 Identities = 189/217 (87%) Strand = Plus / Plus Query: 94 ttcacgatgaaggtgatcgctgcctacctgcttgctgttctgggtggaaacactaaacca 153 ||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 75 ttcacaatgaagctgatcgctgcctacctgctcgctgttctgggtggaaacacctctcca 134 Query: 154 actgctgatgacgttaaaaacatcctggaatcagttggggctgaagctgatgaagacagg 213 ||||||||||| |||| ||||| |||||||||||||| | ||||||| |||| || ||| Sbjct: 135 tctgctgatgacattaagaacattctggaatcagttggcgttgaagctaatgacgagagg 194 Query: 214 ctggagtgcctgctcgctgaacttaaagataaggacataacagaagtgattgcagctgga 273 ||||||| ||||||| | ||||| | | ||||||||||||||||||||||| |||||| Sbjct: 195 ctggagttcctgctctcagaactggagggcaaggacataacagaagtgattgctgctgga 254 Query: 274 agggagaagtttgcctctgtgccttcaggtggcggtg 310 |||||||||||||| |||||||| |||||||| |||| Sbjct: 255 agggagaagtttgcttctgtgccctcaggtggtggtg 291 Score = 121 bits (61), Expect = 4e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 346 ggtggtggtgcagcacctgctgaagaggcaaagaaggaggagaaagttgaagagaaggaa 405 ||||| ||||||||||||||||||||||||||||| |||||||| || |||||||||||| Sbjct: 324 ggtggcggtgcagcacctgctgaagaggcaaagaaagaggagaaggtcgaagagaaggaa 383 Query: 406 gaatctgatgacgatatgggtttcagtttgttcgact 442 || |||||||| || ||||||||||| ||||| |||| Sbjct: 384 gagtctgatgatgacatgggtttcagcttgtttgact 420