BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst039m20 (898 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|Q9SE42|RPE1_ORYSJ Ribulose-phosphate 3-epimerase, cytoplasmic... 375 e-111 gb|ABK96131.1| unknown [Populus trichocarpa] 358 e-102 ref|NP_176518.1| ribulose-phosphate 3-epimerase, cytosolic, puta... 336 3e-95 ref|NP_566153.1| ribulose-phosphate 3-epimerase, cytosolic, puta... 333 1e-94 ref|NP_001063604.1| Os09g0505700 [Oryza sativa (japonica cultiva... 318 2e-93 >sp|Q9SE42|RPE1_ORYSJ Ribulose-phosphate 3-epimerase, cytoplasmic isoform (Ribulose-5-phosphate-epimerase) (Cyt-RPEase) (RPEcyt) (Pentose-5-phosphate 3-epimerase) (PPE) pdb|1H1Y|A Chain A, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3- Epimerase From Rice Complexed With Sulfate pdb|1H1Y|B Chain B, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3- Epimerase From Rice Complexed With Sulfate pdb|1H1Z|A Chain A, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3- Epimerase From Rice Complexed With Sulfate And Zinc pdb|1H1Z|B Chain B, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3- Epimerase From Rice Complexed With Sulfate And Zinc gb|AAF01048.1|AF189365_1 D-ribulose-5-phosphate 3-epimerase [Oryza sativa] gb|EAZ09671.1| hypothetical protein OsI_030903 [Oryza sativa (indica cultivar-group)] Length = 228 Score = 375 bits (964), Expect(2) = e-111 Identities = 184/192 (95%), Positives = 189/192 (98%) Frame = +2 Query: 110 KIAPSMLSSDFANLAAEAERMLRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 289 KIAPSMLSSDFANLAAEA+RM+RLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL Sbjct: 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 67 Query: 290 DCHLMVTNPSDYVEPLGKAGASGFTFHIEVTRDNWQELIQSIKAKGMRPGVSLRPGTPVE 469 DCHLMVTNPSDYVEPL KAGASGFTFHIEV+RDNWQELIQSIKAKGMRPGVSLRPGTPVE Sbjct: 68 DCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVE 127 Query: 470 EVFPLVEAENPVELVLVMTVEPGFGGQKFVPEMMDKVRTLRKKYPSLDIEVDGGLGPSTI 649 EVFPLVEAENPVELVLVMTVEPGFGGQKF+PEMM+KVR LRKKYPSLDIEVDGGLGPSTI Sbjct: 128 EVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTI 187 Query: 650 DAAASAGANCIV 685 D AASAGANCIV Sbjct: 188 DVAASAGANCIV 199 Score = 50.4 bits (119), Expect(2) = e-111 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +1 Query: 688 GSSIFGAADPGEVISVLRKSVEESQNKS 771 GSSIFGAA+PGEVIS LRKSVE SQNKS Sbjct: 201 GSSIFGAAEPGEVISALRKSVEGSQNKS 228 >gb|ABK96131.1| unknown [Populus trichocarpa] Length = 226 Score = 358 bits (918), Expect(2) = e-102 Identities = 171/192 (89%), Positives = 184/192 (95%) Frame = +2 Query: 110 KIAPSMLSSDFANLAAEAERMLRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 289 KIAPSMLSSDFANLA+EA+RML GADWLHMDIMDGHFVPNLTIGAPVI+SLRKHTKAYL Sbjct: 6 KIAPSMLSSDFANLASEAQRMLDCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYL 65 Query: 290 DCHLMVTNPSDYVEPLGKAGASGFTFHIEVTRDNWQELIQSIKAKGMRPGVSLRPGTPVE 469 DCHLMVTNP DYVEPLGKAGASGFTFH+EV+RDNW +L+Q IK+KGMRPGVSL+PGTP+E Sbjct: 66 DCHLMVTNPLDYVEPLGKAGASGFTFHVEVSRDNWGDLVQRIKSKGMRPGVSLKPGTPIE 125 Query: 470 EVFPLVEAENPVELVLVMTVEPGFGGQKFVPEMMDKVRTLRKKYPSLDIEVDGGLGPSTI 649 EV+PLVE ENPVE+VLVMTVEPGFGGQKF+PE MDKVRTLRKKYPSLDIEVDGGLGPSTI Sbjct: 126 EVYPLVEGENPVEMVLVMTVEPGFGGQKFMPETMDKVRTLRKKYPSLDIEVDGGLGPSTI 185 Query: 650 DAAASAGANCIV 685 D AASAGANCIV Sbjct: 186 DMAASAGANCIV 197 Score = 38.5 bits (88), Expect(2) = e-102 Identities = 18/28 (64%), Positives = 22/28 (78%) Frame = +1 Query: 688 GSSIFGAADPGEVISVLRKSVEESQNKS 771 GSS+FGA D +VIS+LRKSVEE Q + Sbjct: 199 GSSVFGAPDSAQVISLLRKSVEEVQKNN 226 >ref|NP_176518.1| ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative [Arabidopsis thaliana] gb|AAG52146.1|AC022355_7 putative D-ribulose-5-phosphate; 35237-36732 [Arabidopsis thaliana] gb|AAM26668.1| At1g63290/F9N12_9 [Arabidopsis thaliana] gb|AAM65247.1| putative D-ribulose-5-phosphate [Arabidopsis thaliana] gb|AAN28763.1| At1g63290/F9N12_9 [Arabidopsis thaliana] Length = 227 Score = 336 bits (861), Expect(2) = 3e-95 Identities = 159/192 (82%), Positives = 178/192 (92%) Frame = +2 Query: 110 KIAPSMLSSDFANLAAEAERMLRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 289 KIAPSMLSSDFANLAAEA+RM+ LGA+WLHMDIMDGHFV NLTIGAPVI+SLRKHT AYL Sbjct: 7 KIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKHTNAYL 66 Query: 290 DCHLMVTNPSDYVEPLGKAGASGFTFHIEVTRDNWQELIQSIKAKGMRPGVSLRPGTPVE 469 DCHLMVTNP DYV+ + KAGASGFTFH+EV ++NWQEL++ IKA GMRPGV+L+PGTPVE Sbjct: 67 DCHLMVTNPMDYVDQMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKPGTPVE 126 Query: 470 EVFPLVEAENPVELVLVMTVEPGFGGQKFVPEMMDKVRTLRKKYPSLDIEVDGGLGPSTI 649 +V+PLVE NPVE+VLVMTVEPGFGGQKF+P MMDKVR LR KYP+LDIEVDGGLGPSTI Sbjct: 127 QVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMMDKVRALRNKYPTLDIEVDGGLGPSTI 186 Query: 650 DAAASAGANCIV 685 DAAA+AGANCIV Sbjct: 187 DAAAAAGANCIV 198 Score = 38.1 bits (87), Expect(2) = 3e-95 Identities = 17/25 (68%), Positives = 22/25 (88%) Frame = +1 Query: 688 GSSIFGAADPGEVISVLRKSVEESQ 762 GSS+FGA PG+VIS+LR SVE++Q Sbjct: 200 GSSVFGAPKPGDVISLLRASVEKAQ 224 >ref|NP_566153.1| ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative [Arabidopsis thaliana] ref|NP_850495.1| ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative [Arabidopsis thaliana] gb|AAK43856.1|AF370479_1 putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana] gb|AAM64398.1| putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana] gb|AAN72185.1| putative D-ribulose-5-phosphate 3-epimerase [Arabidopsis thaliana] Length = 225 Score = 333 bits (854), Expect(2) = 1e-94 Identities = 156/192 (81%), Positives = 177/192 (92%) Frame = +2 Query: 110 KIAPSMLSSDFANLAAEAERMLRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 289 KIAPSMLSSDFANLAAEA RM+ LGA+WLHMDIMDGHFVPNLTIGAPVI+SLRKHT AYL Sbjct: 5 KIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTNAYL 64 Query: 290 DCHLMVTNPSDYVEPLGKAGASGFTFHIEVTRDNWQELIQSIKAKGMRPGVSLRPGTPVE 469 DCHLMVTNP DYV + KAGASGFTFH+EV +DNWQ+L++ IK+ GMRPGV+L+PGTPVE Sbjct: 65 DCHLMVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGTPVE 124 Query: 470 EVFPLVEAENPVELVLVMTVEPGFGGQKFVPEMMDKVRTLRKKYPSLDIEVDGGLGPSTI 649 +V+PLVE PVE+VLVMTVEPGFGGQKF+P+MMDKVR LR+KYP+LDI+VDGGLGPSTI Sbjct: 125 QVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALRQKYPTLDIQVDGGLGPSTI 184 Query: 650 DAAASAGANCIV 685 D AA+AGANCIV Sbjct: 185 DTAAAAGANCIV 196 Score = 39.3 bits (90), Expect(2) = 1e-94 Identities = 17/25 (68%), Positives = 23/25 (92%) Frame = +1 Query: 688 GSSIFGAADPGEVISVLRKSVEESQ 762 GSS+FGA +PG+VIS+LR SVE++Q Sbjct: 198 GSSVFGAPEPGDVISLLRTSVEKAQ 222 >ref|NP_001063604.1| Os09g0505700 [Oryza sativa (japonica cultivar-group)] dbj|BAF25518.1| Os09g0505700 [Oryza sativa (japonica cultivar-group)] Length = 205 Score = 318 bits (814), Expect(2) = 2e-93 Identities = 161/192 (83%), Positives = 166/192 (86%) Frame = +2 Query: 110 KIAPSMLSSDFANLAAEAERMLRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 289 KIAPSMLSSDFANLAAEA+RM+RLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL Sbjct: 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYL 67 Query: 290 DCHLMVTNPSDYVEPLGKAGASGFTFHIEVTRDNWQELIQSIKAKGMRPGVSLRPGTPVE 469 DCHLMVTNPSDYVEPL KAGASGFTFHIEV+RDNWQELIQSIKAKGMRPGVSLRPGTPVE Sbjct: 68 DCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTPVE 127 Query: 470 EVFPLVEAENPVELVLVMTVEPGFGGQKFVPEMMDKVRTLRKKYPSLDIEVDGGLGPSTI 649 EVFPL F+PEMM+KVR LRKKYPSLDIEVDGGLGPSTI Sbjct: 128 EVFPL-----------------------FMPEMMEKVRALRKKYPSLDIEVDGGLGPSTI 164 Query: 650 DAAASAGANCIV 685 D AASAGANCIV Sbjct: 165 DVAASAGANCIV 176 Score = 50.4 bits (119), Expect(2) = 2e-93 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +1 Query: 688 GSSIFGAADPGEVISVLRKSVEESQNKS 771 GSSIFGAA+PGEVIS LRKSVE SQNKS Sbjct: 178 GSSIFGAAEPGEVISALRKSVEGSQNKS 205