BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst038b02
         (1247 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY99033.1| hypothetical protein OsI_020266 [Oryza sativa (in...   367   e-100
ref|NP_001056331.1| Os05g0564200 [Oryza sativa (japonica cultiva...   367   e-100
emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza ...   367   e-100
emb|CAO66301.1| unnamed protein product [Vitis vinifera]              358   4e-97
ref|NP_174086.1| ATU2AF35A; RNA binding [Arabidopsis thaliana] >...   354   6e-96

>gb|EAY99033.1| hypothetical protein OsI_020266 [Oryza sativa (indica
           cultivar-group)]
          Length = 298

 Score =  367 bits (942), Expect = e-100
 Identities = 167/185 (90%), Positives = 180/185 (97%)
 Frame = +2

Query: 203 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTIVLMNMYQRPDMITP 382
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPTIVL NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60

Query: 383 GVDAQSQPIDPHKMQEHFEDFYEDIFEELSKFGDIETLNICDNLADHMIGNVYVQFREED 562
           GVDAQ QPIDP KMQEHFEDFYEDI+EELSKFG++ETLN+CDNLADHMIGNVYVQFREE+
Sbjct: 61  GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120

Query: 563 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGKDL 742
           QA AAH ALQGRFYSGRPIIV++SPVTDFREATCRQ+EENSCNRGGYCNFMHVKQIG++L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180

Query: 743 RKKLF 757
           R+KL+
Sbjct: 181 RRKLY 185


>ref|NP_001056331.1| Os05g0564200 [Oryza sativa (japonica cultivar-group)]
 gb|AAT77399.1| 'U2 snRNP auxiliary factor, small subunit' [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF18245.1| Os05g0564200 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ35286.1| hypothetical protein OsJ_018769 [Oryza sativa (japonica
           cultivar-group)]
          Length = 304

 Score =  367 bits (942), Expect = e-100
 Identities = 167/185 (90%), Positives = 180/185 (97%)
 Frame = +2

Query: 203 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTIVLMNMYQRPDMITP 382
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPTIVL NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60

Query: 383 GVDAQSQPIDPHKMQEHFEDFYEDIFEELSKFGDIETLNICDNLADHMIGNVYVQFREED 562
           GVDAQ QPIDP KMQEHFEDFYEDI+EELSKFG++ETLN+CDNLADHMIGNVYVQFREE+
Sbjct: 61  GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120

Query: 563 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGKDL 742
           QA AAH ALQGRFYSGRPIIV++SPVTDFREATCRQ+EENSCNRGGYCNFMHVKQIG++L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180

Query: 743 RKKLF 757
           R+KL+
Sbjct: 181 RRKLY 185


>emb|CAA77132.1| U2 snRNP auxiliary factor, small subunit [Oryza sativa]
          Length = 301

 Score =  367 bits (942), Expect = e-100
 Identities = 167/185 (90%), Positives = 180/185 (97%)
 Frame = +2

Query: 203 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTIVLMNMYQRPDMITP 382
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPTIVL NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTVSPTIVLANMYQRPDMITP 60

Query: 383 GVDAQSQPIDPHKMQEHFEDFYEDIFEELSKFGDIETLNICDNLADHMIGNVYVQFREED 562
           GVDAQ QPIDP KMQEHFEDFYEDI+EELSKFG++ETLN+CDNLADHMIGNVYVQFREE+
Sbjct: 61  GVDAQGQPIDPEKMQEHFEDFYEDIYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEE 120

Query: 563 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGKDL 742
           QA AAH ALQGRFYSGRPIIV++SPVTDFREATCRQ+EENSCNRGGYCNFMHVKQIG++L
Sbjct: 121 QAVAAHNALQGRFYSGRPIIVEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGREL 180

Query: 743 RKKLF 757
           R+KL+
Sbjct: 181 RRKLY 185


>emb|CAO66301.1| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  358 bits (919), Expect = 4e-97
 Identities = 165/185 (89%), Positives = 177/185 (95%)
 Frame = +2

Query: 203 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTIVLMNMYQRPDMITP 382
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT++L NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 383 GVDAQSQPIDPHKMQEHFEDFYEDIFEELSKFGDIETLNICDNLADHMIGNVYVQFREED 562
           GVDAQ QPIDP K+QEHFEDFYEDIFEEL KFG+IE+LN+CDNLADHMIGNVYVQF+EE+
Sbjct: 61  GVDAQGQPIDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEE 120

Query: 563 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGKDL 742
           QAAAA  ALQGRFYSGRPII DFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IG+DL
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDL 180

Query: 743 RKKLF 757
           R+KLF
Sbjct: 181 RRKLF 185


>ref|NP_174086.1| ATU2AF35A; RNA binding [Arabidopsis thaliana]
 gb|AAD46002.1|AC005916_14 Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small
           subunit from Oryza sativa.  ESTs gb|AA586295 and
           gb|AA597332 come from this gene. [Arabidopsis thaliana]
 gb|AAF24943.1|AC012375_6 T22C5.10 [Arabidopsis thaliana]
 gb|AAK06875.1|AF344324_1 putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
 gb|AAL38678.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
 gb|AAL91249.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
 gb|AAM20157.1| putative U2 snRNP auxiliary factor protein [Arabidopsis thaliana]
 gb|AAM66073.1| putative U2 snRNP auxiliary factor [Arabidopsis thaliana]
 gb|AAM67427.1| At1g27650/T22C5_2 [Arabidopsis thaliana]
          Length = 296

 Score =  354 bits (909), Expect = 6e-96
 Identities = 162/185 (87%), Positives = 176/185 (95%)
 Frame = +2

Query: 203 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTIVLMNMYQRPDMITP 382
           MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPT++L NMYQRPDMITP
Sbjct: 1   MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP 60

Query: 383 GVDAQSQPIDPHKMQEHFEDFYEDIFEELSKFGDIETLNICDNLADHMIGNVYVQFREED 562
           GVDAQ QP+DP K+QEHFEDF+ED+FEEL KFG+IE+LNICDNLADHMIGNVYVQF+EED
Sbjct: 61  GVDAQGQPLDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEED 120

Query: 563 QAAAAHTALQGRFYSGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGKDL 742
           QAAAA  ALQGRFYSGRPII DFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK + ++L
Sbjct: 121 QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSREL 180

Query: 743 RKKLF 757
           R+KLF
Sbjct: 181 RRKLF 185