BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst037j24
         (671 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY86465.1| hypothetical protein OsI_007698 [Oryza sativa (in...   192   1e-47
ref|NP_001047268.1| Os02g0586500 [Oryza sativa (japonica cultiva...   191   3e-47
emb|CAE03048.2| OSJNBa0089K21.2 [Oryza sativa (japonica cultivar...   191   4e-47
gb|ABK93236.1| unknown [Populus trichocarpa] >gi|118488779|gb|AB...   188   3e-46
gb|ABC00745.1| putative small nuclear ribonucleoprotein D1 [Bras...   185   2e-45

>gb|EAY86465.1| hypothetical protein OsI_007698 [Oryza sativa (indica
           cultivar-group)]
          Length = 114

 Score =  192 bits (489), Expect = 1e-47
 Identities = 96/98 (97%), Positives = 97/98 (98%)
 Frame = +1

Query: 58  MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 237
           MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 238 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 351
           RGNNIRYYILPDSLNLETLLVE+TPRVK KKPTAGKPL
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPL 98


>ref|NP_001047268.1| Os02g0586500 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD17484.1| putative small nuclear ribonucleoprotein D1 polypeptide 16kDa;
           snRNP core protein D1; Sm-D autoantigen [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF09182.1| Os02g0586500 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ23605.1| hypothetical protein OsJ_007088 [Oryza sativa (japonica
           cultivar-group)]
          Length = 114

 Score =  191 bits (485), Expect = 3e-47
 Identities = 95/98 (96%), Positives = 96/98 (97%)
 Frame = +1

Query: 58  MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 237
           MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSV
Sbjct: 1   MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV 60

Query: 238 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 351
           RGNNIRYYILPDSLNLETLLVE+TPRVK KKPTAGKPL
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPL 98


>emb|CAE03048.2| OSJNBa0089K21.2 [Oryza sativa (japonica cultivar-group)]
 emb|CAH67043.1| OSIGBa0124N08.5 [Oryza sativa (indica cultivar-group)]
          Length = 114

 Score =  191 bits (484), Expect = 4e-47
 Identities = 95/98 (96%), Positives = 96/98 (97%)
 Frame = +1

Query: 58  MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 237
           MKLVRFLMKLNNETVTIELKNGT VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 238 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 351
           RGNNIRYYILPDSLNLETLLVE+TPRVK KKPTAGKPL
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPL 98


>gb|ABK93236.1| unknown [Populus trichocarpa]
 gb|ABK96200.1| unknown [Populus trichocarpa]
          Length = 115

 Score =  188 bits (477), Expect = 3e-46
 Identities = 93/98 (94%), Positives = 96/98 (97%)
 Frame = +1

Query: 58  MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 237
           MKLVRFLMKLNNETV+IELKNGT VHGTITGVDISMNTHLKTVKLT+KGKNPVTLDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTVKGKNPVTLDHLSV 60

Query: 238 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 351
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAG+ L
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRAL 98


>gb|ABC00745.1| putative small nuclear ribonucleoprotein D1 [Brassica napus]
          Length = 118

 Score =  185 bits (469), Expect = 2e-45
 Identities = 88/98 (89%), Positives = 96/98 (97%)
 Frame = +1

Query: 58  MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 237
           MKLVRFLMKLNNETV+IELKNGT VHGTITGVD+SMNTHLKTVK+TLKGKNPVT+DHLS+
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKMTLKGKNPVTMDHLSL 60

Query: 238 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGKPL 351
           RGNNIRYYILPDSLNLETLLVE+TPR+KPKKP AGKP+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEDTPRLKPKKPVAGKPV 98