BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst036a06
         (558 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001048660.1| Os03g0102200 [Oryza sativa (japonica cultiva...   224   3e-57
gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypepti...   220   3e-56
gb|EDQ52833.1| predicted protein [Physcomitrella patens subsp. p...   215   1e-54
emb|CAN66735.1| hypothetical protein [Vitis vinifera] >gi|157353...   214   2e-54
gb|ABD32320.1| DNA-directed RNA polymerase, subunit C11/M/9 [Med...   213   5e-54

>ref|NP_001048660.1| Os03g0102200 [Oryza sativa (japonica cultivar-group)]
 gb|ABF93490.1| DNA-directed RNA polymerase II 15.1 kDa polypeptide, putative,
           expressed [Oryza sativa (japonica cultivar-group)]
 dbj|BAF10574.1| Os03g0102200 [Oryza sativa (japonica cultivar-group)]
          Length = 114

 Score =  224 bits (570), Expect = 3e-57
 Identities = 101/114 (88%), Positives = 109/114 (95%)
 Frame = +1

Query: 43  MSTMKFCRECNNILYPREERDKRVLLFACRNCEHQEVSDNCCVYRNEVHHSAGERTQVLQ 222
           MSTMKFCRECNNILYP+EE+D+R+LLFACRNCEHQEVS++ CVYRNEV H+AGERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEEKDRRLLLFACRNCEHQEVSESKCVYRNEVAHAAGERTQVLQ 60

Query: 223 DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCSQACGHRWRE 384
           DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCC+  C HRWRE
Sbjct: 61  DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCNLTCAHRWRE 114


>gb|ABA98929.1| DNA-directed RNA polymerase II 14.5 kDa polypeptide, putative,
           expressed [Oryza sativa (japonica cultivar-group)]
 gb|EAY83508.1| hypothetical protein OsI_037467 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ20865.1| hypothetical protein OsJ_035074 [Oryza sativa (japonica
           cultivar-group)]
          Length = 114

 Score =  220 bits (561), Expect = 3e-56
 Identities = 97/114 (85%), Positives = 107/114 (93%)
 Frame = +1

Query: 43  MSTMKFCRECNNILYPREERDKRVLLFACRNCEHQEVSDNCCVYRNEVHHSAGERTQVLQ 222
           MSTMKFCRECNNILYP+E+RD+++LL+ACRNC+HQEV+DN CVYRN VHHSAGE TQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDQKILLYACRNCDHQEVADNNCVYRNVVHHSAGEFTQVLQ 60

Query: 223 DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCSQACGHRWRE 384
           DVA DPTLPRTK VRCA CGHGEAVFFQATARGEEGMTLFFVCC+ +CGHRWRE
Sbjct: 61  DVAGDPTLPRTKAVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE 114


>gb|EDQ52833.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 114

 Score =  215 bits (547), Expect = 1e-54
 Identities = 97/114 (85%), Positives = 106/114 (92%)
 Frame = +1

Query: 43  MSTMKFCRECNNILYPREERDKRVLLFACRNCEHQEVSDNCCVYRNEVHHSAGERTQVLQ 222
           MSTMKFCRECNNILYPRE+RDK+VLL+ACRNC+HQEV+DN CVYRNEV HSA ERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPREDRDKKVLLYACRNCDHQEVADNNCVYRNEVLHSADERTQVLQ 60

Query: 223 DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCSQACGHRWRE 384
           D+ASDPTLPRTK VRCA C HGEAVFFQATARGEEGMTLFFVCC+  CG+RWR+
Sbjct: 61  DIASDPTLPRTKNVRCANCQHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>emb|CAN66735.1| hypothetical protein [Vitis vinifera]
 emb|CAO44896.1| unnamed protein product [Vitis vinifera]
          Length = 114

 Score =  214 bits (546), Expect = 2e-54
 Identities = 92/114 (80%), Positives = 108/114 (94%)
 Frame = +1

Query: 43  MSTMKFCRECNNILYPREERDKRVLLFACRNCEHQEVSDNCCVYRNEVHHSAGERTQVLQ 222
           MSTMKFCRECNNILYP+E+R++++LL+ACRNC+HQEV++N CVYRNE+HHS GERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60

Query: 223 DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCSQACGHRWRE 384
           DVA+DPTLPRTK+VRCA C HGEAVFFQATARGEEGMTLFFVCC+  CG+RWR+
Sbjct: 61  DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>gb|ABD32320.1| DNA-directed RNA polymerase, subunit C11/M/9 [Medicago truncatula]
          Length = 114

 Score =  213 bits (542), Expect = 5e-54
 Identities = 91/114 (79%), Positives = 104/114 (91%)
 Frame = +1

Query: 43  MSTMKFCRECNNILYPREERDKRVLLFACRNCEHQEVSDNCCVYRNEVHHSAGERTQVLQ 222
           MSTMKFCRECNNILYP+E+R++++LL+ACRNC+HQE +DN CVYRNE+HHS  ERTQVLQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60

Query: 223 DVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCCSQACGHRWRE 384
           DVA+DPTLPRTK VRC  C HGEAVFFQATARGEEGMTLFFVCC+  CGHRWR+
Sbjct: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114