BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst035j18
         (735 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045526.1| Os01g0970500 [Oryza sativa (japonica cultiva...   190   6e-47
ref|NP_001054426.1| Os05g0107700 [Oryza sativa (japonica cultiva...   187   4e-46
gb|AAV53715.1| transcription factor IIA gamma subunit [Oryza sat...   185   2e-45
emb|CAN60284.1| hypothetical protein [Vitis vinifera] >gi|157335...   181   3e-44
ref|NP_194175.1| transcription initiation factor IIA gamma chain...   181   4e-44

>ref|NP_001045526.1| Os01g0970500 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD87357.1| putative transcription factor IIA small subunit [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAD87713.1| putative transcription factor IIA small subunit [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF07440.1| Os01g0970500 [Oryza sativa (japonica cultivar-group)]
 gb|EAY77389.1| hypothetical protein OsI_005236 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ41096.1| hypothetical protein OsJ_024579 [Oryza sativa (japonica
           cultivar-group)]
          Length = 109

 Score =  190 bits (483), Expect = 6e-47
 Identities = 94/109 (86%), Positives = 101/109 (92%)
 Frame = +3

Query: 174 MATFELYRRSTIGMCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVGVK 353
           MATFELYRRSTIGMCLT+TLDDMVSSG LSPELAIQVLVQFDKSMT ALE+QVKSKV VK
Sbjct: 1   MATFELYRRSTIGMCLTDTLDDMVSSGALSPELAIQVLVQFDKSMTSALEHQVKSKVTVK 60

Query: 354 GHLHTYRFCDNVWTFILKDATFKYEEISEKVSKVKIVACDSKLLEARQE 500
           GHLHTYRFCDNVWTFIL DA FK EEI+E ++KVKIVACDSKLLE ++E
Sbjct: 61  GHLHTYRFCDNVWTFILTDAIFKNEEITETINKVKIVACDSKLLETKEE 109


>ref|NP_001054426.1| Os05g0107700 [Oryza sativa (japonica cultivar-group)]
 sp|Q0DLD3|T2AG_ORYSJ Transcription initiation factor IIA gamma chain (TFIIA-gamma)
 sp|A2XZI2|T2AG_ORYSI Transcription initiation factor IIA gamma chain (TFIIA-gamma)
 gb|AAK73129.1|AC079022_2 putative transcription factor IIA small subunit [Oryza sativa]
 gb|AAO33769.1| transcription factor IIA small subunit [Oryza sativa (indica
           cultivar-group)]
 gb|AAU44131.1| putative transcription initiation factor IIA gamma chain [Oryza
           sativa (japonica cultivar-group)]
 gb|AAV53716.1| transcription factor IIA gamma subunit [Oryza sativa (indica
           cultivar-group)]
 dbj|BAF16340.1| Os05g0107700 [Oryza sativa (japonica cultivar-group)]
          Length = 106

 Score =  187 bits (476), Expect = 4e-46
 Identities = 92/104 (88%), Positives = 99/104 (95%)
 Frame = +3

Query: 174 MATFELYRRSTIGMCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVGVK 353
           MATFELYRRSTIGMCLTETLD+MVSSGTLSPELAIQVLVQFDKSMT+ALENQVKSKV +K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK 60

Query: 354 GHLHTYRFCDNVWTFILKDATFKYEEISEKVSKVKIVACDSKLL 485
           GHLHTYRFCDNVWTFIL +A+FK EE +E+V KVKIVACDSKLL
Sbjct: 61  GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLL 104


>gb|AAV53715.1| transcription factor IIA gamma subunit [Oryza sativa (indica
           cultivar-group)]
          Length = 106

 Score =  185 bits (470), Expect = 2e-45
 Identities = 91/104 (87%), Positives = 98/104 (94%)
 Frame = +3

Query: 174 MATFELYRRSTIGMCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVGVK 353
           MATFELYRRSTIGMCLTETLD+MVSSGTLSPELAIQVL QFDKSMT+ALENQVKSKV +K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLEQFDKSMTEALENQVKSKVSIK 60

Query: 354 GHLHTYRFCDNVWTFILKDATFKYEEISEKVSKVKIVACDSKLL 485
           GHLHTYRFCDNVWTFIL +A+FK EE +E+V KVKIVACDSKLL
Sbjct: 61  GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLL 104


>emb|CAN60284.1| hypothetical protein [Vitis vinifera]
 emb|CAO61578.1| unnamed protein product [Vitis vinifera]
          Length = 106

 Score =  181 bits (460), Expect = 3e-44
 Identities = 89/104 (85%), Positives = 96/104 (92%)
 Frame = +3

Query: 174 MATFELYRRSTIGMCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVGVK 353
           MATFELYRRSTIGMCLTETLD+MV +GTLSPELAIQVLVQFDKSMT+ALE+QVKSKV +K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALESQVKSKVTIK 60

Query: 354 GHLHTYRFCDNVWTFILKDATFKYEEISEKVSKVKIVACDSKLL 485
           GHLHTYRFCDNVWTFIL+DA FK EE  E V +VKIVACDSKLL
Sbjct: 61  GHLHTYRFCDNVWTFILQDALFKNEESQENVGRVKIVACDSKLL 104


>ref|NP_194175.1| transcription initiation factor IIA gamma chain / TFIIA-gamma
           (TFIIA-S) [Arabidopsis thaliana]
 ref|NP_849434.1| transcription initiation factor IIA gamma chain / TFIIA-gamma
           (TFIIA-S) [Arabidopsis thaliana]
 sp|Q39236|T2AG_ARATH Transcription initiation factor IIA gamma chain (TFIIA-gamma)
 emb|CAA11524.1| transcription factor IIA small subunit [Arabidopsis thaliana]
 emb|CAB45079.1| transcription factor IIA small subunit [Arabidopsis thaliana]
 emb|CAB79354.1| transcription factor IIA small subunit [Arabidopsis thaliana]
 gb|AAL60014.1| putative transcription factor IIA small subunit [Arabidopsis
           thaliana]
 gb|AAM20063.1| putative transcription factor IIA small subunit [Arabidopsis
           thaliana]
 gb|AAM62958.1| transcription factor IIA small subunit [Arabidopsis thaliana]
 gb|AAR28001.1| TFIIA-S [Arabidopsis thaliana]
          Length = 106

 Score =  181 bits (459), Expect = 4e-44
 Identities = 88/104 (84%), Positives = 97/104 (93%)
 Frame = +3

Query: 174 MATFELYRRSTIGMCLTETLDDMVSSGTLSPELAIQVLVQFDKSMTDALENQVKSKVGVK 353
           MATFELYRRSTIGMCLTETLD+MV SGTLSPELAIQVLVQFDKSMT+ALE+QVK+KV +K
Sbjct: 1   MATFELYRRSTIGMCLTETLDEMVQSGTLSPELAIQVLVQFDKSMTEALESQVKTKVSIK 60

Query: 354 GHLHTYRFCDNVWTFILKDATFKYEEISEKVSKVKIVACDSKLL 485
           GHLHTYRFCDNVWTFIL+DA FK ++  E VS+VKIVACDSKLL
Sbjct: 61  GHLHTYRFCDNVWTFILQDAMFKSDDRQENVSRVKIVACDSKLL 104