BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst031k16
         (1576 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054546.1| Os05g0129700 [Oryza sativa (japonica cultiva...   402   e-110
ref|NP_001105085.1| knotted related homeobox5 [Zea mays] >gi|303...   385   e-105
ref|NP_001042827.1| Os01g0302500 [Oryza sativa (japonica cultiva...   382   e-104
ref|NP_001105508.1| liguleless3 [Zea mays] >gi|4240539|gb|AAD136...   381   e-104
dbj|BAA79224.1| knotted1-type homeobox protein OSH6 [Oryza sativa]    380   e-103

>ref|NP_001054546.1| Os05g0129700 [Oryza sativa (japonica cultivar-group)]
 gb|AAC32817.1| KNOX class homeodomain protein [Oryza sativa]
 dbj|BAA77818.1| HOS9 [Oryza sativa (japonica cultivar-group)]
 dbj|BAA79226.1| knotted1-type homeobox protein OSH71 [Oryza sativa]
 gb|AAU10751.1| KNOX class homeodomain protein [Oryza sativa (japonica
            cultivar-group)]
 dbj|BAF16460.1| Os05g0129700 [Oryza sativa (japonica cultivar-group)]
          Length = 311

 Score =  402 bits (1032), Expect = e-110
 Identities = 202/263 (76%), Positives = 206/263 (78%), Gaps = 4/263 (1%)
 Frame = +3

Query: 489  ADLTELMKAQIAGHPRYPSLLSAYIECRKVGAPPEVATXXXXXXXXXXXXXXXXXXXXX- 665
            ADLTELMKAQIAGHP YPSLLSAYIECRKVGAPPEV T                      
Sbjct: 49   ADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEI 108

Query: 666  ---PELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLTSLCGGASTATSHSDEMV 836
               PELDEFME YCRVL RYKEEL+RPFDEAASFL+ I TQL SLCGGA   T +SDEMV
Sbjct: 109  GLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMV 168

Query: 837  GSSEDEPCSGDADASDLGQEHSSRLADHELKEMLLKKYSGCFSRLRSEFLXXXXXXXXXX 1016
            GSSEDEPCSGDADA+D GQEHSSRLADHELKEMLLKKYSGC SRLRSEFL          
Sbjct: 169  GSSEDEPCSGDADAADFGQEHSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPK 228

Query: 1017 DARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFAL 1196
            DARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFAL
Sbjct: 229  DARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFAL 288

Query: 1197 MEGVXXXXXXXXXLYFDTGTIGP 1265
            MEGV         LYFDTGTIGP
Sbjct: 289  MEGVTGGSSSGTTLYFDTGTIGP 311


>ref|NP_001105085.1| knotted related homeobox5 [Zea mays]
 gb|AAP31410.1|AF457119_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
          Length = 298

 Score =  385 bits (989), Expect = e-105
 Identities = 207/301 (68%), Positives = 215/301 (71%), Gaps = 5/301 (1%)
 Frame = +3

Query: 378  MEDLYSIHPXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ADLTELMKAQIAGHPRYPSLL 551
            MEDLYSIHP                              ADLTEL+KAQIAGHPRYPSLL
Sbjct: 1    MEDLYSIHPGISRHGAAATSEASGVAGGPGSPPPPPPPAADLTELVKAQIAGHPRYPSLL 60

Query: 552  SAYIECRKVGAPPEVATXXXXXXXXXXXXXXXXXXXXX--PELDEFMEAYCRVLVRYKEE 725
            SAYI+CRKVGAP EVAT                       PELDEFME YCR+L RYKEE
Sbjct: 61   SAYIDCRKVGAPSEVATLLEEIGRERCAAASAGGEVVGMDPELDEFMETYCRLLERYKEE 120

Query: 726  LSRPFDEAASFLSSIQTQLTSLCGGASTATSHSDEMVGSSEDEPCSGDADAS-DLGQEHS 902
            LSRPFDEAASFLSS++TQL+SLCGGA+   S SDEMV SSEDEPCSGD DA+ D GQEHS
Sbjct: 121  LSRPFDEAASFLSSVRTQLSSLCGGAA---SLSDEMVESSEDEPCSGDTDATTDPGQEHS 177

Query: 903  SRLADHELKEMLLKKYSGCFSRLRSEFLXXXXXXXXXXDARSALMDWWNTHYRWPYPTEE 1082
            SRLAD ELKEMLLKKYSGC SRLRSEFL          DARSALMDWWNTHYRWPYPTEE
Sbjct: 178  SRLADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEE 237

Query: 1083 DKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVXXXXXXXXXLYFDTGTIG 1262
            DKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEG          LYFDTGTIG
Sbjct: 238  DKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGGVSGSSSGTTLYFDTGTIG 297

Query: 1263 P 1265
            P
Sbjct: 298  P 298


>ref|NP_001042827.1| Os01g0302500 [Oryza sativa (japonica cultivar-group)]
 dbj|BAB19772.1| putative knotted1-type homeobox protein [Oryza sativa (japonica
            cultivar-group)]
 dbj|BAB93157.1| knotted1-type homeobox protein OSH6 [Oryza sativa (japonica
            cultivar-group)]
 dbj|BAF04741.1| Os01g0302500 [Oryza sativa (japonica cultivar-group)]
          Length = 301

 Score =  382 bits (981), Expect = e-104
 Identities = 201/303 (66%), Positives = 217/303 (71%), Gaps = 7/303 (2%)
 Frame = +3

Query: 378  MEDLYSIHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLTELMKAQIAGHPRYPSLLSA 557
            MEDLYSIHP                            +DLTELMKAQIAGHPRYP+LLSA
Sbjct: 1    MEDLYSIHPGISRVGGAASEASGVGVVVGGGGGSSS-SDLTELMKAQIAGHPRYPTLLSA 59

Query: 558  YIECRKVGAPPEVATXXXXXXXXXXXXXXXXXXXXX---PELDEFMEAYCRVLVRYKEEL 728
            YIECRKVGAPPEVA+                        PELDEFMEAYCRVLVRYKEEL
Sbjct: 60   YIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGVDPELDEFMEAYCRVLVRYKEEL 119

Query: 729  SRPFDEAASFLSSIQTQLTSLCGGAS----TATSHSDEMVGSSEDEPCSGDADASDLGQE 896
            SRPFDEAASFLSSIQTQL++LC GA+    T  +HSDEMVGSS+++ CSG+ D  D+GQE
Sbjct: 120  SRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDEMVGSSDEDQCSGETDMLDIGQE 179

Query: 897  HSSRLADHELKEMLLKKYSGCFSRLRSEFLXXXXXXXXXXDARSALMDWWNTHYRWPYPT 1076
             SSRLADHELKEMLLKKYSGC SRLRSEFL          DARSAL++WWNTHYRWPYPT
Sbjct: 180  QSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 239

Query: 1077 EEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVXXXXXXXXXLYFDTGT 1256
            EEDK+RLAA TGLDPKQINNWFINQRKRHWKPS+ MRFALMEGV         LYFDTGT
Sbjct: 240  EEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFALMEGV-AGGSSGTTLYFDTGT 298

Query: 1257 IGP 1265
            IGP
Sbjct: 299  IGP 301


>ref|NP_001105508.1| liguleless3 [Zea mays]
 gb|AAD13611.1| knotted class 1 homeodomain protein liguleless3 [Zea mays]
          Length = 295

 Score =  381 bits (979), Expect = e-104
 Identities = 197/299 (65%), Positives = 210/299 (70%), Gaps = 3/299 (1%)
 Frame = +3

Query: 378  MEDLYSIHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLTELMKAQIAGHPRYPSLLSA 557
            MEDLYSIHP                            +DLTELMKAQIA HPRYPSLLSA
Sbjct: 1    MEDLYSIHPGISRVVGGAASEASVAGAGAGGPSP---SDLTELMKAQIASHPRYPSLLSA 57

Query: 558  YIECRKVGAPPEVATXXXXXXXXXXXXXXXXXXXXXPELDEFMEAYCRVLVRYKEELSRP 737
            YIECRKVGA P V +                     PELDEFM+AYCRVLVRYKEEL+RP
Sbjct: 58   YIECRKVGAHPHVTSLLEEVSRERRPDAGAGEIGVDPELDEFMDAYCRVLVRYKEELTRP 117

Query: 738  FDEAASFLSSIQTQLTSLCGGAST---ATSHSDEMVGSSEDEPCSGDADASDLGQEHSSR 908
            FDEAASFLSSIQ QL+ LC G S+     +HSD+M+GSSEDE CSGD D  D+GQEHSS 
Sbjct: 118  FDEAASFLSSIQAQLSDLCSGGSSPAATATHSDDMMGSSEDEQCSGDTDVPDMGQEHSSH 177

Query: 909  LADHELKEMLLKKYSGCFSRLRSEFLXXXXXXXXXXDARSALMDWWNTHYRWPYPTEEDK 1088
            L DHELKEMLLKKYSGC SRLRSEFL          DAR+ L++WWNTHYRWPYPTEEDK
Sbjct: 178  LGDHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDK 237

Query: 1089 VRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVXXXXXXXXXLYFDTGTIGP 1265
            VRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGV         LYFDTGTIGP
Sbjct: 238  VRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGV-AGGSSGTTLYFDTGTIGP 295


>dbj|BAA79224.1| knotted1-type homeobox protein OSH6 [Oryza sativa]
          Length = 301

 Score =  380 bits (977), Expect = e-103
 Identities = 200/303 (66%), Positives = 216/303 (71%), Gaps = 7/303 (2%)
 Frame = +3

Query: 378  MEDLYSIHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLTELMKAQIAGHPRYPSLLSA 557
            MEDLYSIHP                            +DLTELMKAQIAGHPRYP+LLSA
Sbjct: 1    MEDLYSIHPGISRVGGAASEASGVGVVVGGGGGSSS-SDLTELMKAQIAGHPRYPTLLSA 59

Query: 558  YIECRKVGAPPEVATXXXXXXXXXXXXXXXXXXXXX---PELDEFMEAYCRVLVRYKEEL 728
            YIECRKVGAPPEVA+                        PELDEFMEAYCRVLVRYKEEL
Sbjct: 60   YIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGVDPELDEFMEAYCRVLVRYKEEL 119

Query: 729  SRPFDEAASFLSSIQTQLTSLCGGAS----TATSHSDEMVGSSEDEPCSGDADASDLGQE 896
            SRPFDEAASFLSSIQTQL++LC GA+    T  +HSDEMVGSS+++ CSG+ D  D+GQE
Sbjct: 120  SRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHSDEMVGSSDEDQCSGETDMLDIGQE 179

Query: 897  HSSRLADHELKEMLLKKYSGCFSRLRSEFLXXXXXXXXXXDARSALMDWWNTHYRWPYPT 1076
             SSRLADHELKEMLLKKYSGC SRLRSEFL          DARSAL++WWNTHYRWPYPT
Sbjct: 180  QSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 239

Query: 1077 EEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDMRFALMEGVXXXXXXXXXLYFDTGT 1256
            EEDK+RLAA TGLDPKQINNWFINQRKRHWKPS+ MRFA MEGV         LYFDTGT
Sbjct: 240  EEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGMRFAFMEGV-AGGSSGTTLYFDTGT 298

Query: 1257 IGP 1265
            IGP
Sbjct: 299  IGP 301