BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst029c20 (1212 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001062572.1| Os09g0110400 [Oryza sativa (japonica cultiva... 326 e-141 gb|EAZ08113.1| hypothetical protein OsI_029345 [Oryza sativa (in... 281 e-107 gb|ABC75365.1| RNA polymerase, dimerisation [Medicago truncatula] 259 3e-97 emb|CAO47851.1| unnamed protein product [Vitis vinifera] 256 4e-96 emb|CAN60923.1| hypothetical protein [Vitis vinifera] 254 8e-96 >ref|NP_001062572.1| Os09g0110400 [Oryza sativa (japonica cultivar-group)] dbj|BAD17541.1| putative DNA-directed RNA polymerase II [Oryza sativa (japonica cultivar-group)] dbj|BAF24486.1| Os09g0110400 [Oryza sativa (japonica cultivar-group)] Length = 330 Score = 326 bits (836), Expect(3) = e-141 Identities = 168/196 (85%), Positives = 177/196 (90%), Gaps = 5/196 (2%) Frame = +1 Query: 289 PLTSAAAMAMRFSRDCDSCDGDGSCEYYSVEFHLAARATDSDQTLEVTSND-----HKVC 453 PLTSAAAMAMRFSRDCD+CDGDGSCEY SVEFHLAARATDSDQTLEVTSND KVC Sbjct: 79 PLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVTSNDLRSTDPKVC 138 Query: 454 PVDQARAYQQAVGATHPYEYDAAAAVDQRGILIVKLRRGQELKL*AIARKGIGKDHAKWS 633 PVDQARAYQ A+G T P+ D AAA DQRGILIVKLRRGQEL+L AIARKGIGKDHAKWS Sbjct: 139 PVDQARAYQHALGGTEPF--DTAAAADQRGILIVKLRRGQELRLRAIARKGIGKDHAKWS 196 Query: 634 PAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDPNTQKVVVVDPEAYTYD 813 PAATVTFMYEP+IRINEELMETLTLEEKR+ VESSPTKVF+IDPNTQ+VVV D EAYTYD Sbjct: 197 PAATVTFMYEPEIRINEELMETLTLEEKRNLVESSPTKVFNIDPNTQQVVVEDAEAYTYD 256 Query: 814 DEAIEKADAMGKPGLI 861 DE I+KADAMGKPGLI Sbjct: 257 DEVIKKADAMGKPGLI 272 Score = 132 bits (332), Expect(3) = e-141 Identities = 71/80 (88%), Positives = 72/80 (90%) Frame = +3 Query: 51 MDRPAACASYQRLPPRVRIRELKDDYAKFELRDTGASMANALHRVMIAEVPTVAIDLVEI 230 M+R A SYQR P RVRIRELKDDYAKFELRDT ASMANAL RVMIAEVPTVAIDLVEI Sbjct: 1 MERAAGGVSYQRFP-RVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEI 59 Query: 231 EVNSSVLNDEFIAHRLGLIP 290 EVNSSVLNDEFIAHRLGLIP Sbjct: 60 EVNSSVLNDEFIAHRLGLIP 79 Score = 92.0 bits (227), Expect(3) = e-141 Identities = 47/64 (73%), Positives = 54/64 (84%), Gaps = 3/64 (4%) Frame = +3 Query: 843 GEARIDRIDAKEDSFVFTV*TTGAVTAYELIMNGVTVLRQELDAARLQDDD---GELGAH 1013 G+ + I+AKEDSF+FTV TTGA+TAYELIMN +TVLRQ+LDA RLQDDD GELGAH Sbjct: 267 GKPGLIEINAKEDSFIFTVETTGAITAYELIMNAITVLRQKLDAVRLQDDDADLGELGAH 326 Query: 1014 LVGG 1025 LVGG Sbjct: 327 LVGG 330 >gb|EAZ08113.1| hypothetical protein OsI_029345 [Oryza sativa (indica cultivar-group)] gb|EAZ43745.1| hypothetical protein OsJ_027228 [Oryza sativa (japonica cultivar-group)] Length = 250 Score = 281 bits (719), Expect(2) = e-107 Identities = 145/173 (83%), Positives = 154/173 (89%), Gaps = 5/173 (2%) Frame = +1 Query: 289 PLTSAAAMAMRFSRDCDSCDGDGSCEYYSVEFHLAARATDSDQTLEVTSND-----HKVC 453 PLTSAAAMAMRFSRDCD+CDGDGSCEY SVEFHLAARATDSDQTLEVTSND KVC Sbjct: 79 PLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVTSNDLRSTDPKVC 138 Query: 454 PVDQARAYQQAVGATHPYEYDAAAAVDQRGILIVKLRRGQELKL*AIARKGIGKDHAKWS 633 PVDQARAYQ A+G T P+ D AAA DQRGILIVKLRRGQEL+L AIARKGIGKDHAKWS Sbjct: 139 PVDQARAYQHALGGTEPF--DTAAAADQRGILIVKLRRGQELRLRAIARKGIGKDHAKWS 196 Query: 634 PAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDPNTQKVVVVD 792 PAATVTFMYEP+IRINEELMETLTLEEKR+ VESSPTKVF+IDPNTQ+ V + Sbjct: 197 PAATVTFMYEPEIRINEELMETLTLEEKRNLVESSPTKVFNIDPNTQQSVTTE 249 Score = 132 bits (332), Expect(2) = e-107 Identities = 71/80 (88%), Positives = 72/80 (90%) Frame = +3 Query: 51 MDRPAACASYQRLPPRVRIRELKDDYAKFELRDTGASMANALHRVMIAEVPTVAIDLVEI 230 M+R A SYQR P RVRIRELKDDYAKFELRDT ASMANAL RVMIAEVPTVAIDLVEI Sbjct: 1 MERAAGGVSYQRFP-RVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEI 59 Query: 231 EVNSSVLNDEFIAHRLGLIP 290 EVNSSVLNDEFIAHRLGLIP Sbjct: 60 EVNSSVLNDEFIAHRLGLIP 79 >gb|ABC75365.1| RNA polymerase, dimerisation [Medicago truncatula] Length = 318 Score = 259 bits (663), Expect(2) = 3e-97 Identities = 135/196 (68%), Positives = 154/196 (78%), Gaps = 5/196 (2%) Frame = +1 Query: 289 PLTSAAAMAMRFSRDCDSCDGDGSCEYYSVEFHLAARATDSDQTLEVTS-----NDHKVC 453 PLTS AMAMRFSRDCD+CDGDG CEY SVEFHL + +DQTL+V+S +DH V Sbjct: 75 PLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCI-TDQTLDVSSKDLISSDHTVT 133 Query: 454 PVDQARAYQQAVGATHPYEYDAAAAVDQRGILIVKLRRGQELKL*AIARKGIGKDHAKWS 633 PVD DA+ D RGI+IVKLRRGQEL+L AIARKGIGKDHAKWS Sbjct: 134 PVDVPGG-------------DASIESDGRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 634 PAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDPNTQKVVVVDPEAYTYD 813 PAATVTFMYEPDI INE+LME+LTLEEK+ WV+SSPT+VFDIDP TQ+V+VVDPEAY+YD Sbjct: 181 PAATVTFMYEPDIHINEDLMESLTLEEKKEWVDSSPTRVFDIDPVTQQVMVVDPEAYSYD 240 Query: 814 DEAIEKADAMGKPGLI 861 DE I+KA+AMGKPGLI Sbjct: 241 DEVIKKAEAMGKPGLI 256 Score = 122 bits (305), Expect(2) = 3e-97 Identities = 64/73 (87%), Positives = 68/73 (93%) Frame = +3 Query: 72 ASYQRLPPRVRIRELKDDYAKFELRDTGASMANALHRVMIAEVPTVAIDLVEIEVNSSVL 251 ASY R+P RV+IRELKDDY KFELRDT AS+ANAL RVMI+EVPTVAIDLVEIEVNSSVL Sbjct: 4 ASYARMP-RVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSSVL 62 Query: 252 NDEFIAHRLGLIP 290 NDEFIAHRLGLIP Sbjct: 63 NDEFIAHRLGLIP 75 >emb|CAO47851.1| unnamed protein product [Vitis vinifera] Length = 318 Score = 256 bits (653), Expect(2) = 4e-96 Identities = 134/196 (68%), Positives = 158/196 (80%), Gaps = 5/196 (2%) Frame = +1 Query: 289 PLTSAAAMAMRFSRDCDSCDGDGSCEYYSVEFHLAARATDSDQTLEVTS-----NDHKVC 453 PLTS AMAMRFSRDCD+CDGDG CE+ SVEFHL A+ +D+TL+VTS +DH V Sbjct: 75 PLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCM-TDETLDVTSKDLISSDHTVV 133 Query: 454 PVDQARAYQQAVGATHPYEYDAAAAVDQRGILIVKLRRGQELKL*AIARKGIGKDHAKWS 633 PVD + + G YD+A D++GI+IVKLRRGQEL+L AIARKGIGKDHAKWS Sbjct: 134 PVD----FSDSSG------YDSA---DKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 634 PAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDPNTQKVVVVDPEAYTYD 813 PAATVTFMYEP+I INE+LME+LTLEEK SWVESSPTKVFDID ++Q+VVV D EAYTYD Sbjct: 181 PAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYD 240 Query: 814 DEAIEKADAMGKPGLI 861 DE ++KA+AMGKPGL+ Sbjct: 241 DEVLKKAEAMGKPGLV 256 Score = 122 bits (306), Expect(2) = 4e-96 Identities = 63/72 (87%), Positives = 68/72 (94%) Frame = +3 Query: 75 SYQRLPPRVRIRELKDDYAKFELRDTGASMANALHRVMIAEVPTVAIDLVEIEVNSSVLN 254 SYQR P +++IRE+KDDYAKFELR+T ASMANAL RVMIAEVPTVAIDLVEIEVNSSVLN Sbjct: 5 SYQRFP-KIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLN 63 Query: 255 DEFIAHRLGLIP 290 DEFIAHRLGLIP Sbjct: 64 DEFIAHRLGLIP 75 >emb|CAN60923.1| hypothetical protein [Vitis vinifera] Length = 318 Score = 254 bits (650), Expect(2) = 8e-96 Identities = 133/196 (67%), Positives = 158/196 (80%), Gaps = 5/196 (2%) Frame = +1 Query: 289 PLTSAAAMAMRFSRDCDSCDGDGSCEYYSVEFHLAARATDSDQTLEVTS-----NDHKVC 453 PLTS AM+MRFSRDCD+CDGDG CE+ SVEFHL A+ +D+TL+VTS +DH V Sbjct: 75 PLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCM-TDETLDVTSKDLISSDHTVV 133 Query: 454 PVDQARAYQQAVGATHPYEYDAAAAVDQRGILIVKLRRGQELKL*AIARKGIGKDHAKWS 633 PVD + + G YD+A D++GI+IVKLRRGQEL+L AIARKGIGKDHAKWS Sbjct: 134 PVD----FSDSSG------YDSA---DKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS 180 Query: 634 PAATVTFMYEPDIRINEELMETLTLEEKRSWVESSPTKVFDIDPNTQKVVVVDPEAYTYD 813 PAATVTFMYEP+I INE+LME+LTLEEK SWVESSPTKVFDID ++Q+VVV D EAYTYD Sbjct: 181 PAATVTFMYEPEIHINEDLMESLTLEEKTSWVESSPTKVFDIDASSQQVVVADAEAYTYD 240 Query: 814 DEAIEKADAMGKPGLI 861 DE ++KA+AMGKPGL+ Sbjct: 241 DEVLKKAEAMGKPGLV 256 Score = 122 bits (306), Expect(2) = 8e-96 Identities = 63/72 (87%), Positives = 68/72 (94%) Frame = +3 Query: 75 SYQRLPPRVRIRELKDDYAKFELRDTGASMANALHRVMIAEVPTVAIDLVEIEVNSSVLN 254 SYQR P +++IRE+KDDYAKFELR+T ASMANAL RVMIAEVPTVAIDLVEIEVNSSVLN Sbjct: 5 SYQRFP-KIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVLN 63 Query: 255 DEFIAHRLGLIP 290 DEFIAHRLGLIP Sbjct: 64 DEFIAHRLGLIP 75