BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst028e05
         (589 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD23667.1| putative Sm protein F [Oryza sativa (japonica cu...   181   2e-44
ref|NP_001052634.1| Os04g0388900 [Oryza sativa (japonica cultiva...   180   4e-44
ref|NP_001046930.1| Os02g0510100 [Oryza sativa (japonica cultiva...   179   7e-44
gb|ABK26542.1| unknown [Picea sitchensis]                             166   1e-39
gb|ABK22473.1| unknown [Picea sitchensis]                             165   2e-39

>dbj|BAD23667.1| putative Sm protein F [Oryza sativa (japonica cultivar-group)]
          Length = 101

 Score =  181 bits (459), Expect = 2e-44
 Identities = 93/102 (91%), Positives = 96/102 (94%), Gaps = 3/102 (2%)
 Frame = +1

Query: 70  MSTGSADKSGTGSGGGGG---AVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMN 240
           MS+G  +KSG+G GGGGG   AVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMN
Sbjct: 1   MSSGG-EKSGSGGGGGGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMN 59

Query: 241 IAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 366
           IAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA
Sbjct: 60  IAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 101


>ref|NP_001052634.1| Os04g0388900 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF14548.1| Os04g0388900 [Oryza sativa (japonica cultivar-group)]
          Length = 97

 Score =  180 bits (457), Expect = 4e-44
 Identities = 94/100 (94%), Positives = 94/100 (94%), Gaps = 1/100 (1%)
 Frame = +1

Query: 70  MSTGS-ADKSGTGSGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIA 246
           MSTG  ADKSG   GGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIA
Sbjct: 1   MSTGGGADKSG---GGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIA 57

Query: 247 MEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 366
           MEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTD A
Sbjct: 58  MEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDDA 97


>ref|NP_001046930.1| Os02g0510100 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF08844.1| Os02g0510100 [Oryza sativa (japonica cultivar-group)]
          Length = 96

 Score =  179 bits (455), Expect = 7e-44
 Identities = 88/90 (97%), Positives = 88/90 (97%)
 Frame = +1

Query: 97  GTGSGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 276
           G G GGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
Sbjct: 7   GGGGGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 66

Query: 277 QLKNKYGDAFIRGNNVLYISTSKRTLTDGA 366
           QLKNKYGDAFIRGNNVLYISTSKRTLTDGA
Sbjct: 67  QLKNKYGDAFIRGNNVLYISTSKRTLTDGA 96


>gb|ABK26542.1| unknown [Picea sitchensis]
          Length = 91

 Score =  166 bits (419), Expect = 1e-39
 Identities = 84/91 (92%), Positives = 86/91 (94%)
 Frame = +1

Query: 94  SGTGSGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 273
           SG GSGGG  A KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 2   SGGGSGGGTSA-KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 274 GQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 366
           GQLKNKYGDAFIRGNNVLYISTSKRTL +GA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLGEGA 91


>gb|ABK22473.1| unknown [Picea sitchensis]
          Length = 91

 Score =  165 bits (417), Expect = 2e-39
 Identities = 83/91 (91%), Positives = 86/91 (94%)
 Frame = +1

Query: 94  SGTGSGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 273
           SG GSGGG  A KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 2   SGGGSGGGASA-KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 274 GQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 366
           GQLKNKYGDAFIRGNNVLYISTSKR+L +GA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRSLGEGA 91