BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst027k09
         (1496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAM91503.1| IS1 transposase [Salmonella enterica]                 276   e-116
ref|NP_836645.1| IS1 orfB, A [Shigella flexneri 2a str. 2457T] >...   264   e-114
ref|ZP_00697030.1| COG1662: Transposase and inactivated derivati...   322   e-109
ref|YP_309947.1| IS1 ORF [Shigella sonnei Ss046] >gi|73855005|gb...   392   e-107
ref|NP_414562.1| IS1 transposase InsAB' [Escherichia coli K12] >...   344   8e-93

>emb|CAM91503.1| IS1 transposase [Salmonella enterica]
          Length = 232

 Score =  276 bits (706), Expect(2) = e-116
 Identities = 132/149 (88%), Positives = 139/149 (93%)
 Frame = +3

Query: 309 LKKLMPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFSER 488
           LKKL PQSV S IQPG DVI+CAEMDEQWGYVGAKSRQ WLFY YD +R+TVVAHVF ER
Sbjct: 84  LKKLRPQSVNSHIQPGGDVIICAEMDEQWGYVGAKSRQCWLFYTYDRIRRTVVAHVFGER 143

Query: 489 TMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR 668
           T+ATL RL+SLLS F+VV+WMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR
Sbjct: 144 TLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLAR 203

Query: 669 LGRKSLSFSKSVELHDKVIGHYLNIKHYQ 755
           LGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sbjct: 204 LGRKSLSFSKSVELHDKVIGHYLNIKHYQ 232



 Score =  168 bits (426), Expect(2) = e-116
 Identities = 78/85 (91%), Positives = 83/85 (97%)
 Frame = +1

Query: 61  VASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHHKIIDMA 240
           +AS+SI CPSCSAT+GVVRNGKSTAGHQRYLCS+CRKTWQLQFTYTASQPGTH KIIDMA
Sbjct: 1   MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSYCRKTWQLQFTYTASQPGTHQKIIDMA 60

Query: 241 MNGVGCRATARIMGVGLNTILRHLK 315
           MNGVGCRA+ARIMGVGLNTILRHLK
Sbjct: 61  MNGVGCRASARIMGVGLNTILRHLK 85


>ref|NP_836645.1| IS1 orfB, A [Shigella flexneri 2a str. 2457T]
 gb|AAP16451.1| IS1 orfB, A [Shigella flexneri 2a str. 2457T]
          Length = 231

 Score =  264 bits (675), Expect(2) = e-114
 Identities = 128/143 (89%), Positives = 135/143 (94%)
 Frame = +3

Query: 327 QSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFSERTMATLG 506
           +SVTSRIQPGSDVIVCAEMDE WGYVGAKSRQRWLFYAYD +R+TVVAHVF ERT+ATL 
Sbjct: 89  ESVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTLATLE 148

Query: 507 RLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSL 686
           RL+SLLS F+VV+WMTDG PLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARL RKSL
Sbjct: 149 RLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLVRKSL 208

Query: 687 SFSKSVELHDKVIGHYLNIKHYQ 755
           SFSKSVELHDK IGHYLNIKHYQ
Sbjct: 209 SFSKSVELHDKAIGHYLNIKHYQ 231



 Score =  172 bits (437), Expect(2) = e-114
 Identities = 80/90 (88%), Positives = 85/90 (94%)
 Frame = +1

Query: 61  VASVSISCPSCSATDGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHHKIIDMA 240
           +AS+SI CPSCSAT+GVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTH KIIDMA
Sbjct: 1   MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMA 60

Query: 241 MNGVGCRATARIMGVGLNTILRHLKNSCRS 330
           MNGVGCRA+ARIMGVGL T+LRHLKNS  S
Sbjct: 61  MNGVGCRASARIMGVGLYTVLRHLKNSAES 90


>ref|ZP_00697030.1| COG1662: Transposase and inactivated derivatives, IS1 family
           [Shigella boydii BS512]
          Length = 241

 Score =  322 bits (824), Expect(2) = e-109
 Identities = 153/172 (88%), Positives = 159/172 (92%)
 Frame = +3

Query: 240 HEWRWMPGNSPHYGRWPQHDFTSLKKLMPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSR 419
           HEWR M     HYGRWPQH FTSLKKL PQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSR
Sbjct: 70  HEWRRMSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSR 129

Query: 420 QRWLFYAYDSLRKTVVAHVFSERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLH 599
           QRWLFYAYD +R+ VVAHVF ERT+ATL RL+SLLS F+VV+WMTDGWPLYESRLKGKLH
Sbjct: 130 QRWLFYAYDRIRRRVVAHVFGERTLATLERLLSLLSAFEVVVWMTDGWPLYESRLKGKLH 189

Query: 600 VISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ 755
           VISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sbjct: 190 VISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ 241



 Score = 99.0 bits (245), Expect(2) = e-109
 Identities = 51/69 (73%), Positives = 54/69 (78%)
 Frame = +2

Query: 32  LYDGVFEVLQWLLFLSAVPPVQLLTGWCVTAKAPPDISAISALTAVKHGNCSSLTPLLNP 211
           +YDG F+VL WL F S V P  LL  WCVTAKA PDISAISAL AVKHGN SSLTP L+P
Sbjct: 1   MYDGDFKVLAWLPFPSDVLPAPLLKAWCVTAKALPDISAISALIAVKHGNYSSLTPPLSP 60

Query: 212 VRTIKSLIW 238
           VRT KSLIW
Sbjct: 61  VRTRKSLIW 69


>ref|YP_309947.1| IS1 ORF [Shigella sonnei Ss046]
 gb|AAZ87712.1| IS1 ORF [Shigella sonnei Ss046]
          Length = 194

 Score =  392 bits (1006), Expect = e-107
 Identities = 187/194 (96%), Positives = 187/194 (96%)
 Frame = +3

Query: 174 MATAVHLHRFSTRYAP*NH*YGHEWRWMPGNSPHYGRWPQHDFTSLKKLMPQSVTSRIQP 353
           MATAV LHRFSTRYAP NH YGHEWRWMPGN  HYGRWPQHDFTSLKKL PQSVTSRIQP
Sbjct: 1   MATAVRLHRFSTRYAPENHLYGHEWRWMPGNCTHYGRWPQHDFTSLKKLRPQSVTSRIQP 60

Query: 354 GSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFSERTMATLGRLMSLLSPF 533
           GSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVF ERTMATLGRLMSLLSPF
Sbjct: 61  GSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDSLRKTVVAHVFGERTMATLGRLMSLLSPF 120

Query: 534 DVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELH 713
           DVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELH
Sbjct: 121 DVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELH 180

Query: 714 DKVIGHYLNIKHYQ 755
           DKVIGHYLNIKHYQ
Sbjct: 181 DKVIGHYLNIKHYQ 194


>ref|NP_414562.1| IS1 transposase InsAB' [Escherichia coli K12]
 ref|NP_416407.1| IS1 transposase InsAB' [Escherichia coli K12]
 ref|NP_417902.1| IS1 transposase InsAB' [Escherichia coli K12]
 ref|NP_874298.1| insertion element IS1 1/5/6 protein InsB [Haemophilus ducreyi
           35000HP]
 ref|NP_980984.1| InsB [Bacillus cereus ATCC 10987]
 ref|YP_064596.1| insertion element IS1 1/5/6 protein (InsB) [Desulfotalea
           psychrophila LSv54]
 ref|AP_000685.1| IS1 transposase InsAB' [Escherichia coli W3110]
 ref|AP_002888.1| IS1 element protein [Escherichia coli W3110]
 ref|AP_004347.1| IS1 transposase InsAB' [Escherichia coli W3110]
 ref|YP_602152.1| Transposase [Streptococcus pyogenes MGAS10750]
 ref|YP_001459342.1| IS1, transposase orfB [Escherichia coli HS]
 ref|YP_001459396.1| IS1, transposase orfB [Escherichia coli HS]
 ref|ZP_02089319.1| hypothetical protein CLOBOL_06890 [Clostridium bolteae ATCC
           BAA-613]
 sp|P03830|INSB1_ECOLI Insertion element IS1 1/5/6 protein insB
 sp|P59843|INSB_HAEDU Insertion element IS1 protein insB
 gb|AAF23163.1|AF205566_2 InsB [Escherichia coli]
 gb|AAA58243.1| ORF_o167; overlaps insA [Escherichia coli]
 emb|CAA85745.1| InsB peptide [synthetic construct]
 gb|AAC73132.1| IS1 transposase InsAB' [Escherichia coli K12]
 gb|AAC74963.1| IS1 transposase InsAB' [Escherichia coli K12]
 gb|AAC76470.1| IS1 transposase InsAB' [Escherichia coli K12]
 dbj|BAA16125.1| IS1 element protein [Escherichia coli W3110]
 emb|CAA11396.1| InsB protein [Escherichia coli]
 emb|CAA11400.1| InsB protein [Escherichia coli]
 gb|AAP96687.1| insertion element IS1 1/5/6 protein InsB [Haemophilus ducreyi
           35000HP]
 gb|AAS43592.1| InsB [Bacillus cereus ATCC 10987]
 emb|CAG35589.1| probable insertion element IS1 1/5/6 protein (InsB) [Desulfotalea
           psychrophila LSv54]
 dbj|BAE76033.1| IS1 transposase InsAB' [Escherichia coli W3110]
 dbj|BAE77848.1| IS1 transposase InsAB' [Escherichia coli W3110]
 gb|ABF37608.1| Transposase [Streptococcus pyogenes MGAS10750]
 gb|ABV06959.1| IS1, transposase orfB [Escherichia coli HS]
 gb|ABV07013.1| IS1, transposase orfB [Escherichia coli HS]
 gb|EDP12860.1| hypothetical protein CLOBOL_06890 [Clostridium bolteae ATCC
           BAA-613]
          Length = 167

 Score =  344 bits (883), Expect = 8e-93
 Identities = 165/167 (98%), Positives = 165/167 (98%)
 Frame = +3

Query: 255 MPGNSPHYGRWPQHDFTSLKKLMPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLF 434
           MPGNSPHYGRWPQHDFTSLKKL PQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLF
Sbjct: 1   MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLF 60

Query: 435 YAYDSLRKTVVAHVFSERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKR 614
           YAYDSLRKTVVAHVF ERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKR
Sbjct: 61  YAYDSLRKTVVAHVFGERTMATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKR 120

Query: 615 YTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ 755
           YTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ
Sbjct: 121 YTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHYLNIKHYQ 167