BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst027j13
         (565 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054830.1| Os05g0186000 [Oryza sativa (japonica cultiva...   195   1e-48
gb|EAY96811.1| hypothetical protein OsI_018044 [Oryza sativa (in...   186   5e-46
emb|CAO15799.1| unnamed protein product [Vitis vinifera]              114   3e-24
emb|CAN83819.1| hypothetical protein [Vitis vinifera]                 112   1e-23
ref|NP_181349.1| PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4); s...   104   3e-21

>ref|NP_001054830.1| Os05g0186000 [Oryza sativa (japonica cultivar-group)]
 gb|AAU90153.1| unknown protein [Oryza sativa (japonica cultivar-group)]
 dbj|BAF16744.1| Os05g0186000 [Oryza sativa (japonica cultivar-group)]
          Length = 126

 Score =  195 bits (496), Expect = 1e-48
 Identities = 100/127 (78%), Positives = 109/127 (85%), Gaps = 2/127 (1%)
 Frame = +1

Query: 37  MALLAVQGMAVSTAATFPS-HHHGAVSSSYALPSTASFSLSASRASLAATA-LSAPLTPF 210
           MALLAV  MA S A TFPS HHH AVSS  ALP+ A+FS S SR + AA A LSAPLTP 
Sbjct: 1   MALLAVHAMAASPA-TFPSSHHHAAVSSYCALPAAAAFSRSRSRVAAAAAATLSAPLTPV 59

Query: 211 LDVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLYTPPAPPRKDQFDDGEITPIE 390
           L+VYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARL+ PPAPPRKDQFDDGE+TPI+
Sbjct: 60  LEVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQFDDGEVTPID 119

Query: 391 IDEDILD 411
           ID+DIL+
Sbjct: 120 IDDDILE 126


>gb|EAY96811.1| hypothetical protein OsI_018044 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ33124.1| hypothetical protein OsJ_016607 [Oryza sativa (japonica
           cultivar-group)]
          Length = 138

 Score =  186 bits (473), Expect = 5e-46
 Identities = 100/139 (71%), Positives = 109/139 (78%), Gaps = 14/139 (10%)
 Frame = +1

Query: 37  MALLAVQGMAVSTAATFPS-HHHGAVSSSYALPSTASFSLSASRASLAATA-LSAPLTPF 210
           MALLAV  MA S A TFPS HHH AVSS  ALP+ A+FS S SR + AA A LSAPLTP 
Sbjct: 1   MALLAVHAMAASPA-TFPSSHHHAAVSSYCALPAAAAFSRSRSRVAAAAAATLSAPLTPV 59

Query: 211 LDVYCGRGDKKTKRGKRFNHSYGN------------ARPRNKKKGTGPARLYTPPAPPRK 354
           L+VYCGRGDKKTKRGKRFNHSYGN            ARPRNKKKGTGPARL+ PPAPPRK
Sbjct: 60  LEVYCGRGDKKTKRGKRFNHSYGNTCHLLTAVCSSQARPRNKKKGTGPARLFAPPAPPRK 119

Query: 355 DQFDDGEITPIEIDEDILD 411
           DQFDDGE+TPI+ID+DIL+
Sbjct: 120 DQFDDGEVTPIDIDDDILE 138


>emb|CAO15799.1| unnamed protein product [Vitis vinifera]
          Length = 118

 Score =  114 bits (285), Expect = 3e-24
 Identities = 54/98 (55%), Positives = 68/98 (69%)
 Frame = +1

Query: 118 SYALPSTASFSLSASRASLAATALSAPLTPFLDVYCGRGDKKTKRGKRFNHSYGNARPRN 297
           S++   T + S      SL+ +A S P  P   VYCGRGDKKT +GKRFNHS+GNARPRN
Sbjct: 23  SFSQSETLAVSFDTRFVSLSISATSPP--PIPSVYCGRGDKKTAKGKRFNHSFGNARPRN 80

Query: 298 KKKGTGPARLYTPPAPPRKDQFDDGEITPIEIDEDILD 411
           KKKG GP R   PP+PP+KD+F+D E+  IEIDE + +
Sbjct: 81  KKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDESLFN 118


>emb|CAN83819.1| hypothetical protein [Vitis vinifera]
          Length = 117

 Score =  112 bits (281), Expect = 1e-23
 Identities = 53/98 (54%), Positives = 68/98 (69%)
 Frame = +1

Query: 118 SYALPSTASFSLSASRASLAATALSAPLTPFLDVYCGRGDKKTKRGKRFNHSYGNARPRN 297
           S++   T + S      SL+ +A S P+     VYCGRGDKKT +GKRFNHS+GNARPRN
Sbjct: 23  SFSQSETLAVSFDTRFVSLSISATSPPIP---SVYCGRGDKKTAKGKRFNHSFGNARPRN 79

Query: 298 KKKGTGPARLYTPPAPPRKDQFDDGEITPIEIDEDILD 411
           KKKG GP R   PP+PP+KD+F+D E+  IEIDE + +
Sbjct: 80  KKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDESLFN 117


>ref|NP_181349.1| PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4); structural
           constituent of ribosome [Arabidopsis thaliana]
 sp|O80439|RR31_ARATH 30S ribosomal protein S31, chloroplast precursor (Plastid-specific
           30S ribosomal protein 4) (PSRP-4)
 gb|AAF64153.1|AF236826_1 plastid-specific ribosomal protein 4 precursor [Arabidopsis
           thaliana]
 gb|AAC27163.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
 gb|AAK97685.1| At2g38140/F16M14.7 [Arabidopsis thaliana]
 gb|AAL31104.1| At2g38140/F16M14.7 [Arabidopsis thaliana]
 gb|AAM67339.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
          Length = 118

 Score =  104 bits (260), Expect = 3e-21
 Identities = 53/99 (53%), Positives = 68/99 (68%)
 Frame = +1

Query: 109 VSSSYALPSTASFSLSASRASLAATALSAPLTPFLDVYCGRGDKKTKRGKRFNHSYGNAR 288
           +SSS++   TA  SLS      + +  S+   P   VYCGRGD+KT +GKRFNHS+GNAR
Sbjct: 21  LSSSHS--ETAGVSLSCFTHQFSLSTSSSSSIPL--VYCGRGDRKTAKGKRFNHSFGNAR 76

Query: 289 PRNKKKGTGPARLYTPPAPPRKDQFDDGEITPIEIDEDI 405
           PRNK KG GP R+  PPAPPRKD+F++ E   I+IDE +
Sbjct: 77  PRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESL 115