BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst027i16
         (936 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA46876.1| DNA-binding protein [Zea mays]                        295   4e-78
ref|NP_001058640.1| Os06g0728000 [Oryza sativa (japonica cultiva...   293   8e-78
sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B (HMG1-like prote...   289   2e-76
gb|EAZ38354.1| hypothetical protein OsJ_021837 [Oryza sativa (ja...   285   2e-75
sp|P40621|HMGL_WHEAT HMG1/2-like protein >gi|21803|emb|CAA77641....   275   2e-72

>emb|CAA46876.1| DNA-binding protein [Zea mays]
          Length = 168

 Score =  295 bits (754), Expect = 4e-78
 Identities = 151/164 (92%), Positives = 155/164 (94%)
 Frame = +1

Query: 148 SAQESAMKGAKPRGAAKADAKLAVNSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFME 327
           S  ESAMKGAK +GAAKADAKLAV SKGAEKPA KGRKGKAGKDPNKPKRAPSAFFVFME
Sbjct: 6   SPLESAMKGAKSKGAAKADAKLAVKSKGAEKPA-KGRKGKAGKDPNKPKRAPSAFFVFME 64

Query: 328 EFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAYNKGE 507
           EFRKEFKEKNPKNKSVAAVGKAAGDRWKSLS++DKAPYVAKANKLK EYNKAIAAYNKGE
Sbjct: 65  EFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGE 124

Query: 508 STAKKAAPAKEEEEEDEEESDKSKSEVNDEDDDEGSEHDEDDDE 639
           STA K APAKEEEEEDEEESDKSKSEVNDEDD+EGSE DEDDDE
Sbjct: 125 STAAKKAPAKEEEEEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 168


>ref|NP_001058640.1| Os06g0728000 [Oryza sativa (japonica cultivar-group)]
 gb|AAC78104.1| high mobility group protein [Oryza sativa]
 gb|AAN28722.1| HMG1 protein [Oryza sativa (indica cultivar-group)]
 gb|AAP21609.1| HMGB1 [Oryza sativa (indica cultivar-group)]
 dbj|BAD61823.1| HMGB1 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF20554.1| Os06g0728000 [Oryza sativa (japonica cultivar-group)]
          Length = 157

 Score =  293 bits (751), Expect = 8e-78
 Identities = 148/158 (93%), Positives = 152/158 (96%)
 Frame = +1

Query: 166 MKGAKPRGAAKADAKLAVNSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 345
           MKGAK +GAAK DAKLAV SKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF
Sbjct: 1   MKGAKSKGAAKPDAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 60

Query: 346 KEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAYNKGESTAKKA 525
           KEKNPKNKSVAAVGKAAGDRWKSL++ADKAPYVAKANKLK EYNKAIAAYNKGESTAKK 
Sbjct: 61  KEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNKGESTAKK- 119

Query: 526 APAKEEEEEDEEESDKSKSEVNDEDDDEGSEHDEDDDE 639
           APAKEEEE+DEEESDKSKSEVNDEDDDEGSE DEDDDE
Sbjct: 120 APAKEEEEDDEEESDKSKSEVNDEDDDEGSEEDEDDDE 157


>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B (HMG1-like protein)
 emb|CAA41220.1| high mobility group protein [Zea mays]
 emb|CAB46752.1| HMGa protein [Zea mays]
 gb|AAM95942.1| nucleosome/chromatin assembly factor group D protein [Zea mays]
          Length = 157

 Score =  289 bits (740), Expect = 2e-76
 Identities = 147/158 (93%), Positives = 151/158 (95%)
 Frame = +1

Query: 166 MKGAKPRGAAKADAKLAVNSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 345
           MKGAK +GAAKADAKLAV SKGAEKPA KGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF
Sbjct: 1   MKGAKSKGAAKADAKLAVKSKGAEKPA-KGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 59

Query: 346 KEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAYNKGESTAKKA 525
           KEKNPKNKSVAAVGKAAGDRWKSLS++DKAPYVAKANKLK EYNKAIAAYNKGESTA K 
Sbjct: 60  KEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKK 119

Query: 526 APAKEEEEEDEEESDKSKSEVNDEDDDEGSEHDEDDDE 639
           APAKEEEEEDEEESDKSKSEVNDEDD+EGSE DEDDDE
Sbjct: 120 APAKEEEEEDEEESDKSKSEVNDEDDEEGSEEDEDDDE 157


>gb|EAZ38354.1| hypothetical protein OsJ_021837 [Oryza sativa (japonica
           cultivar-group)]
          Length = 167

 Score =  285 bits (730), Expect = 2e-75
 Identities = 148/168 (88%), Positives = 152/168 (90%), Gaps = 10/168 (5%)
 Frame = +1

Query: 166 MKGAKPRGAAKADAKLAVNSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFM------- 324
           MKGAK +GAAK DAKLAV SKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFM       
Sbjct: 1   MKGAKSKGAAKPDAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMGFSFDLV 60

Query: 325 ---EEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAY 495
              EEFRKEFKEKNPKNKSVAAVGKAAGDRWKSL++ADKAPYVAKANKLK EYNKAIAAY
Sbjct: 61  SLREEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAY 120

Query: 496 NKGESTAKKAAPAKEEEEEDEEESDKSKSEVNDEDDDEGSEHDEDDDE 639
           NKGESTAKK APAKEEEE+DEEESDKSKSEVNDEDDDEGSE DEDDDE
Sbjct: 121 NKGESTAKK-APAKEEEEDDEEESDKSKSEVNDEDDDEGSEEDEDDDE 167


>sp|P40621|HMGL_WHEAT HMG1/2-like protein
 emb|CAA77641.1| high mobility group protein [Triticum aestivum]
 dbj|BAF30985.1| high mobility globular protein [Triticum aestivum]
          Length = 161

 Score =  275 bits (704), Expect = 2e-72
 Identities = 138/161 (85%), Positives = 149/161 (92%), Gaps = 3/161 (1%)
 Frame = +1

Query: 166 MKGAKPRGAAKADAKLAVNSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 345
           MKGAK +GAAKADAKLAV SKGAEKPAAKG+KGKAGKDPNKPKRAPSAFFVFM EFR+EF
Sbjct: 1   MKGAKSKGAAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEF 60

Query: 346 KEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAYNKGES---TA 516
           K+KNPKNKSVAAVGKAAG+RWKSLS+++KAPYVAKANKLKGEYNKAIAAYNKGES    A
Sbjct: 61  KQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAAA 120

Query: 517 KKAAPAKEEEEEDEEESDKSKSEVNDEDDDEGSEHDEDDDE 639
            K A AKE EEEDEEESDKSKSE+ND+DDDEGS+ DEDDDE
Sbjct: 121 PKKAAAKEVEEEDEEESDKSKSEINDDDDDEGSDEDEDDDE 161