BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst027i02
         (927 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC71530.1| KNOTTED1 homeodomain protein [Lithachne humilis]       442   e-122
gb|AAF32399.1|AF224499_1 KNOTTED-1-like homeobox protein b [Trit...   425   e-117
gb|AAF32398.1|AF224498_1 KNOTTED-1-like homeobox protein a [Trit...   423   e-117
sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 (Hooded protein) >g...   421   e-116
gb|AAB81079.1| knotted class 1 homeodomain protein [Hordeum vulg...   416   e-114

>gb|ABC71530.1| KNOTTED1 homeodomain protein [Lithachne humilis]
          Length = 350

 Score =  442 bits (1137), Expect = e-122
 Identities = 229/257 (89%), Positives = 238/257 (92%), Gaps = 10/257 (3%)
 Frame = +3

Query: 186 FGVGATSHGQ------HHHPWGSSLSAVVAPPPQPLSAG----LPHTPLTLNTAPTTGNN 335
           FG+GA+SHG       HHHPWGSSLSAVVAPPPQP SAG    +P+TPLTLNTAPT G N
Sbjct: 1   FGLGASSHGHGHHHHHHHHPWGSSLSAVVAPPPQPPSAGAGAGMPNTPLTLNTAPTPGGN 60

Query: 336 GSGSGGGNPVLQLANGSLLDACAKAKEPSAPSSSYAADVEAIKAKIISHPHYSSLLAAYL 515
           G G G GNPVLQLANGSLLDACAKAKEPSAPSSSYAADVEAIKAKIISHPHYSSLLAAYL
Sbjct: 61  GGG-GCGNPVLQLANGSLLDACAKAKEPSAPSSSYAADVEAIKAKIISHPHYSSLLAAYL 119

Query: 516 DCQKVGAPPEVAARLTAVAQDLKLRQRTSLSGLGAATEPELDQFMEAYHEMLVKYREELT 695
           DCQKVGAPPEVAARLTA+AQDL+LRQRTSLSGLGAATEPELDQFMEAYHEML+KYREELT
Sbjct: 120 DCQKVGAPPEVAARLTALAQDLELRQRTSLSGLGAATEPELDQFMEAYHEMLMKYREELT 179

Query: 696 RPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHGVDQE 875
           RPLQEAMEFLRRVESQLNSLSISGR LRNILSSGSSEEDQEGSGGETELPE+DAHGVDQE
Sbjct: 180 RPLQEAMEFLRRVESQLNSLSISGRPLRNILSSGSSEEDQEGSGGETELPEVDAHGVDQE 239

Query: 876 LKHHLLKKYSGYLSSLK 926
           LKH LL+KYSGYLSSLK
Sbjct: 240 LKHQLLRKYSGYLSSLK 256


>gb|AAF32399.1|AF224499_1 KNOTTED-1-like homeobox protein b [Triticum aestivum]
 gb|AAF32400.1|AF224500_1 KNOTTED-1-like homeobox protein d [Triticum aestivum]
 dbj|BAD83802.1| KN1 homeobox protein [Triticum aestivum]
 dbj|BAD83803.1| KN1 homeobox protein [Triticum aestivum]
          Length = 363

 Score =  425 bits (1093), Expect = e-117
 Identities = 227/264 (85%), Positives = 239/264 (90%), Gaps = 10/264 (3%)
 Frame = +3

Query: 165 MEEISHHFGVGATSHGQHHH--PWGSS-LSAVVAPPPQPL-----SAG-LPHTPLTLNTA 317
           MEEI HHFG+GAT+HGQHH   PWGSS LSAV+APPPQ       SAG L H+PL+LNTA
Sbjct: 1   MEEIGHHFGLGATAHGQHHSQLPWGSSPLSAVIAPPPQQQQQQQQSAGYLAHSPLSLNTA 60

Query: 318 PTTGNNGSGSGGGNPVLQLANGSLLDACAKA-KEPSAPSSSYAADVEAIKAKIISHPHYS 494
           P +G++G GSG  NPVLQLANGSLL+ACAKA KEPS  SSSYAADVEAIKAKIISHPHYS
Sbjct: 61  PPSGSHGGGSGCSNPVLQLANGSLLEACAKAAKEPS--SSSYAADVEAIKAKIISHPHYS 118

Query: 495 SLLAAYLDCQKVGAPPEVAARLTAVAQDLKLRQRTSLSGLGAATEPELDQFMEAYHEMLV 674
           SLLAAYLDCQKVGAPPEV ARLTAVAQDL+LRQRT+L  LG ATEPELDQFMEAYHEMLV
Sbjct: 119 SLLAAYLDCQKVGAPPEVLARLTAVAQDLELRQRTALGSLGTATEPELDQFMEAYHEMLV 178

Query: 675 KYREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEID 854
           KYREELTRPLQEAMEFLRRVE+QLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEID
Sbjct: 179 KYREELTRPLQEAMEFLRRVETQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEID 238

Query: 855 AHGVDQELKHHLLKKYSGYLSSLK 926
           AHGVDQELKHHLLKKYSGYLSSLK
Sbjct: 239 AHGVDQELKHHLLKKYSGYLSSLK 262


>gb|AAF32398.1|AF224498_1 KNOTTED-1-like homeobox protein a [Triticum aestivum]
 dbj|BAD83801.1| KN1 homeobox protein [Triticum aestivum]
          Length = 362

 Score =  423 bits (1087), Expect = e-117
 Identities = 225/263 (85%), Positives = 238/263 (90%), Gaps = 9/263 (3%)
 Frame = +3

Query: 165 MEEISHHFGVGATSHGQHHH--PWGSS-LSAVVAPPPQPL----SAG-LPHTPLTLNTAP 320
           MEEI HHFG+GAT+HGQHH   PWGSS LSAV+APPPQ      SAG L H+PL+LNTAP
Sbjct: 1   MEEIGHHFGLGATAHGQHHSQLPWGSSPLSAVIAPPPQQQQQQQSAGYLAHSPLSLNTAP 60

Query: 321 TTGNNGSGSGGGNPVLQLANGSLLDACAKA-KEPSAPSSSYAADVEAIKAKIISHPHYSS 497
            +G++G G+G  NPVLQLANGSLL+ACAKA KEPS  SSSYAADVEAIKAKIISHPHYSS
Sbjct: 61  PSGSHGGGTGCSNPVLQLANGSLLEACAKAAKEPS--SSSYAADVEAIKAKIISHPHYSS 118

Query: 498 LLAAYLDCQKVGAPPEVAARLTAVAQDLKLRQRTSLSGLGAATEPELDQFMEAYHEMLVK 677
           LLAAYLDCQKVGAPPEV ARLTAVAQDL+LRQRT+L   G ATEPELDQFMEAYHEMLVK
Sbjct: 119 LLAAYLDCQKVGAPPEVLARLTAVAQDLELRQRTALGSFGTATEPELDQFMEAYHEMLVK 178

Query: 678 YREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDA 857
           YREELTRPLQEAMEFLRRVE+QLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDA
Sbjct: 179 YREELTRPLQEAMEFLRRVETQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDA 238

Query: 858 HGVDQELKHHLLKKYSGYLSSLK 926
           HGVDQELKHHLLKKYSGYLSSLK
Sbjct: 239 HGVDQELKHHLLKKYSGYLSSLK 261


>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 (Hooded protein)
 emb|CAA58503.1| Knox3 [Hordeum vulgare]
          Length = 364

 Score =  421 bits (1082), Expect = e-116
 Identities = 225/265 (84%), Positives = 239/265 (90%), Gaps = 11/265 (4%)
 Frame = +3

Query: 165 MEEISHHFGVGATSHGQHHH--PWGSS-LSAVVAPPPQPL------SAG-LPHTPLTLNT 314
           MEEI HHFG+GAT+HGQHH   PWGSS LSAV++PPPQ        SAG L H+PL+LNT
Sbjct: 1   MEEIGHHFGLGATAHGQHHSQLPWGSSPLSAVISPPPQQQQQHQQQSAGYLAHSPLSLNT 60

Query: 315 APTTGNNGSGSGGGNPVLQLANGSLLDACAKA-KEPSAPSSSYAADVEAIKAKIISHPHY 491
           AP   ++G GSG  NPVLQLANGSLL+ACAKA KEPS  SSSYAADVEAIKAKIISHPHY
Sbjct: 61  APPGVSHGGGSGCSNPVLQLANGSLLEACAKAAKEPS--SSSYAADVEAIKAKIISHPHY 118

Query: 492 SSLLAAYLDCQKVGAPPEVAARLTAVAQDLKLRQRTSLSGLGAATEPELDQFMEAYHEML 671
           SSLLAAYLDCQKVGAPPEV+ARLTAVAQDL+LRQRT+L GLG ATEPELDQFMEAYHEML
Sbjct: 119 SSLLAAYLDCQKVGAPPEVSARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEML 178

Query: 672 VKYREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEI 851
           VKYREELTRPLQEAMEFLRRVE+QLNSLSISGRSLRNILS+GSSEEDQEGSGGETELPEI
Sbjct: 179 VKYREELTRPLQEAMEFLRRVETQLNSLSISGRSLRNILSTGSSEEDQEGSGGETELPEI 238

Query: 852 DAHGVDQELKHHLLKKYSGYLSSLK 926
           DAHGVDQELKHHLLKKYSGYLSSLK
Sbjct: 239 DAHGVDQELKHHLLKKYSGYLSSLK 263


>gb|AAB81079.1| knotted class 1 homeodomain protein [Hordeum vulgare]
          Length = 364

 Score =  416 bits (1068), Expect = e-114
 Identities = 223/265 (84%), Positives = 238/265 (89%), Gaps = 11/265 (4%)
 Frame = +3

Query: 165 MEEISHHFGVGATSHGQHHH--PWGSS-LSAVVAPPPQPL------SAG-LPHTPLTLNT 314
           MEEI HHFG+GAT+HGQHH   PWGSS LSAV++PPPQ        SAG L H+PL+LNT
Sbjct: 1   MEEIGHHFGLGATAHGQHHSQLPWGSSPLSAVISPPPQQQQQHQQQSAGYLAHSPLSLNT 60

Query: 315 APTTGNNGSGSGGGNPVLQLANGSLLDACAKA-KEPSAPSSSYAADVEAIKAKIISHPHY 491
           AP   ++G GSG  NPVLQLANGSLL+ACAKA KEPS  SSSYAADVEAIKAKIISHPH+
Sbjct: 61  APPGVSHGGGSGCSNPVLQLANGSLLEACAKAAKEPS--SSSYAADVEAIKAKIISHPHH 118

Query: 492 SSLLAAYLDCQKVGAPPEVAARLTAVAQDLKLRQRTSLSGLGAATEPELDQFMEAYHEML 671
           SSLLAAYLDCQKVGAPPEV+ARLTAVAQDL+LRQRT+L GLG ATEPELDQFMEAYHEML
Sbjct: 119 SSLLAAYLDCQKVGAPPEVSARLTAVAQDLELRQRTALGGLGTATEPELDQFMEAYHEML 178

Query: 672 VKYREELTRPLQEAMEFLRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSGGETELPEI 851
           VKYREELTRPLQEAMEFLRRVE+QLNSLSIS RSLRNILS+GSSEEDQEGSGGETELPEI
Sbjct: 179 VKYREELTRPLQEAMEFLRRVETQLNSLSISVRSLRNILSTGSSEEDQEGSGGETELPEI 238

Query: 852 DAHGVDQELKHHLLKKYSGYLSSLK 926
           DAHGVDQELKHHLLKKYSGYLSSLK
Sbjct: 239 DAHGVDQELKHHLLKKYSGYLSSLK 263