BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst027b02
         (1144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043015.1| Os01g0358400 [Oryza sativa (japonica cultiva...   516   e-144
ref|NP_001045624.1| Os02g0105900 [Oryza sativa (japonica cultiva...   514   e-144
sp|O22424|RS4_MAIZE 40S ribosomal protein S4 >gi|2331301|gb|AAB6...   509   e-142
gb|AAS48726.1| ribosomal protein S4 [Zea mays]                        504   e-141
gb|AAB67831.1| ribsomal protein S4 [Zea mays]                         500   e-140

>ref|NP_001043015.1| Os01g0358400 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD52963.1| putative 40S ribosomal protein S4 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF04929.1| Os01g0358400 [Oryza sativa (japonica cultivar-group)]
 gb|EAY74000.1| hypothetical protein OsI_001847 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ11863.1| hypothetical protein OsJ_001688 [Oryza sativa (japonica
           cultivar-group)]
 gb|ABR25672.1| 40S ribosomal protein S4 [Oryza sativa (indica cultivar-group)]
          Length = 265

 Score =  516 bits (1329), Expect = e-144
 Identities = 252/256 (98%), Positives = 255/256 (99%)
 Frame = +2

Query: 107 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 286
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 287 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSIRDEDAK 466
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQS++DEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120

Query: 467 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 646
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 647 VMVTGGRNTGRIGVIKNREKHKGSFETIHVEDALGHVFATRLGNVFTIGKGNKPWVSLPK 826
           VMVTGGRNTGR+GVIKNREKHKGSFETIHVEDALGH FATRLGNVFTIGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHAFATRLGNVFTIGKGNKPWVSLPK 240

Query: 827 GKGIKLSIIEEQRKRD 874
           GKGIKLSIIEEQRKRD
Sbjct: 241 GKGIKLSIIEEQRKRD 256


>ref|NP_001045624.1| Os02g0105900 [Oryza sativa (japonica cultivar-group)]
 sp|P49398|RS4_ORYSJ 40S ribosomal protein S4 (SCAR protein SS620)
 dbj|BAD28085.1| putative ribosomal protein S4 [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF07538.1| Os02g0105900 [Oryza sativa (japonica cultivar-group)]
 gb|EAY84111.1| hypothetical protein OsI_005344 [Oryza sativa (indica
           cultivar-group)]
 gb|EAZ21423.1| hypothetical protein OsJ_004906 [Oryza sativa (japonica
           cultivar-group)]
          Length = 265

 Score =  514 bits (1325), Expect = e-144
 Identities = 251/256 (98%), Positives = 255/256 (99%)
 Frame = +2

Query: 107 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 286
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 287 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSIRDEDAK 466
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQS++DEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSVKDEDAK 120

Query: 467 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 646
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP+IKANDTIKIDLETNKIVDFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPIIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 647 VMVTGGRNTGRIGVIKNREKHKGSFETIHVEDALGHVFATRLGNVFTIGKGNKPWVSLPK 826
           VMVTGGRNTGR+GVIKNREKHKGSFETIHVEDALGH FATRLGNVFTIGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPK 240

Query: 827 GKGIKLSIIEEQRKRD 874
           GKGIKLSIIEEQRKRD
Sbjct: 241 GKGIKLSIIEEQRKRD 256


>sp|O22424|RS4_MAIZE 40S ribosomal protein S4
 gb|AAB66899.1| ribosomal protein S4 type I [Zea mays]
          Length = 265

 Score =  509 bits (1310), Expect = e-142
 Identities = 249/256 (97%), Positives = 252/256 (98%)
 Frame = +2

Query: 107 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 286
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 287 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSIRDEDAK 466
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKT ENYRLLYDTKGRFRL  IRDEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 467 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 646
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 647 VMVTGGRNTGRIGVIKNREKHKGSFETIHVEDALGHVFATRLGNVFTIGKGNKPWVSLPK 826
           VMVTGGRNTGR+GVIKNREKHKGSFETIHVED+LGH FATR+GNVFTIGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSFETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240

Query: 827 GKGIKLSIIEEQRKRD 874
           GKGIKLSIIEEQRKRD
Sbjct: 241 GKGIKLSIIEEQRKRD 256


>gb|AAS48726.1| ribosomal protein S4 [Zea mays]
          Length = 265

 Score =  504 bits (1297), Expect = e-141
 Identities = 247/256 (96%), Positives = 250/256 (97%)
 Frame = +2

Query: 107 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 286
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 60

Query: 287 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSIRDEDAK 466
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKT ENYRLLYDTKGRFRL  IRDEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 467 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 646
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDP IKANDTIKIDLETNKIVDFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPPIKANDTIKIDLETNKIVDFIKFDVGNV 180

Query: 647 VMVTGGRNTGRIGVIKNREKHKGSFETIHVEDALGHVFATRLGNVFTIGKGNKPWVSLPK 826
           VMVTGGRNTGR+GVIKNREKHKGS ETIHVED+LGH FATR+GNVFTIGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGSLETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPK 240

Query: 827 GKGIKLSIIEEQRKRD 874
           GKGIKLSIIEEQRKRD
Sbjct: 241 GKGIKLSIIEEQRKRD 256


>gb|AAB67831.1| ribsomal protein S4 [Zea mays]
          Length = 265

 Score =  500 bits (1287), Expect = e-140
 Identities = 243/256 (94%), Positives = 250/256 (97%)
 Frame = +2

Query: 107 MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALTYRE 286
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYAL YRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILIIRNRLKYALNYRE 60

Query: 287 VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTGENYRLLYDTKGRFRLQSIRDEDAK 466
           VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKT ENYRLLYDTKGRFRL  IRDEDAK
Sbjct: 61  VISILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTMENYRLLYDTKGRFRLHPIRDEDAK 120

Query: 467 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNV 646
           FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKI+DFIKFDVGNV
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKIDLETNKIMDFIKFDVGNV 180

Query: 647 VMVTGGRNTGRIGVIKNREKHKGSFETIHVEDALGHVFATRLGNVFTIGKGNKPWVSLPK 826
           VMVTGGRNTGR+GVIKNREKHKG F+TIHVED++GH FATR+GNVFTIGKGNKPWVSLPK
Sbjct: 181 VMVTGGRNTGRVGVIKNREKHKGGFDTIHVEDSMGHQFATRMGNVFTIGKGNKPWVSLPK 240

Query: 827 GKGIKLSIIEEQRKRD 874
           GKGIKLSIIEEQR+RD
Sbjct: 241 GKGIKLSIIEEQRRRD 256