BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst025d21
         (900 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA46876.1| DNA-binding protein [Zea mays]                        269   2e-70
ref|NP_001058640.1| Os06g0728000 [Oryza sativa (japonica cultiva...   268   5e-70
sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B (HMG1-like prote...   263   9e-69
gb|EAZ38354.1| hypothetical protein OsJ_021837 [Oryza sativa (ja...   259   1e-67
sp|P40621|HMGL_WHEAT HMG1/2-like protein >gi|21803|emb|CAA77641....   251   4e-65

>emb|CAA46876.1| DNA-binding protein [Zea mays]
          Length = 168

 Score =  269 bits (687), Expect = 2e-70
 Identities = 141/154 (91%), Positives = 145/154 (94%), Gaps = 2/154 (1%)
 Frame = +1

Query: 148 SAQESAMKGAKPRGAAKADAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFME 327
           S  ESAMKGAK +GAAKADAKLAVKSKGAEKPA KGRKGKAGKDPNKPKRAPSAFFVFME
Sbjct: 6   SPLESAMKGAKSKGAAKADAKLAVKSKGAEKPA-KGRKGKAGKDPNKPKRAPSAFFVFME 64

Query: 328 EFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAYNKGE 507
           EFRKEFKEKNPKNKSVAAVGKAAGDRWKSLS++DKAPYVAKANKLK EYNKAIAAYNKGE
Sbjct: 65  EFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGE 124

Query: 508 STAKKAAPAKEEEEEDEEESDKSKSE--DEDDDE 603
           STA K APAKEEEEEDEEESDKSKSE  DEDD+E
Sbjct: 125 STAAKKAPAKEEEEEDEEESDKSKSEVNDEDDEE 158


>ref|NP_001058640.1| Os06g0728000 [Oryza sativa (japonica cultivar-group)]
 gb|AAC78104.1| high mobility group protein [Oryza sativa]
 gb|AAN28722.1| HMG1 protein [Oryza sativa (indica cultivar-group)]
 gb|AAP21609.1| HMGB1 [Oryza sativa (indica cultivar-group)]
 dbj|BAD61823.1| HMGB1 [Oryza sativa (japonica cultivar-group)]
 dbj|BAF20554.1| Os06g0728000 [Oryza sativa (japonica cultivar-group)]
          Length = 157

 Score =  268 bits (684), Expect = 5e-70
 Identities = 138/148 (93%), Positives = 142/148 (95%), Gaps = 2/148 (1%)
 Frame = +1

Query: 166 MKGAKPRGAAKADAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 345
           MKGAK +GAAK DAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF
Sbjct: 1   MKGAKSKGAAKPDAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 60

Query: 346 KEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAYNKGESTAKKA 525
           KEKNPKNKSVAAVGKAAGDRWKSL++ADKAPYVAKANKLK EYNKAIAAYNKGESTAKK 
Sbjct: 61  KEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAYNKGESTAKK- 119

Query: 526 APAKEEEEEDEEESDKSKSE--DEDDDE 603
           APAKEEEE+DEEESDKSKSE  DEDDDE
Sbjct: 120 APAKEEEEDDEEESDKSKSEVNDEDDDE 147


>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B (HMG1-like protein)
 emb|CAA41220.1| high mobility group protein [Zea mays]
 emb|CAB46752.1| HMGa protein [Zea mays]
 gb|AAM95942.1| nucleosome/chromatin assembly factor group D protein [Zea mays]
          Length = 157

 Score =  263 bits (673), Expect = 9e-69
 Identities = 137/148 (92%), Positives = 141/148 (95%), Gaps = 2/148 (1%)
 Frame = +1

Query: 166 MKGAKPRGAAKADAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 345
           MKGAK +GAAKADAKLAVKSKGAEKPA KGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF
Sbjct: 1   MKGAKSKGAAKADAKLAVKSKGAEKPA-KGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 59

Query: 346 KEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAYNKGESTAKKA 525
           KEKNPKNKSVAAVGKAAGDRWKSLS++DKAPYVAKANKLK EYNKAIAAYNKGESTA K 
Sbjct: 60  KEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAKK 119

Query: 526 APAKEEEEEDEEESDKSKSE--DEDDDE 603
           APAKEEEEEDEEESDKSKSE  DEDD+E
Sbjct: 120 APAKEEEEEDEEESDKSKSEVNDEDDEE 147


>gb|EAZ38354.1| hypothetical protein OsJ_021837 [Oryza sativa (japonica
           cultivar-group)]
          Length = 167

 Score =  259 bits (663), Expect = 1e-67
 Identities = 138/158 (87%), Positives = 142/158 (89%), Gaps = 12/158 (7%)
 Frame = +1

Query: 166 MKGAKPRGAAKADAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFM------- 324
           MKGAK +GAAK DAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFM       
Sbjct: 1   MKGAKSKGAAKPDAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMGFSFDLV 60

Query: 325 ---EEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAY 495
              EEFRKEFKEKNPKNKSVAAVGKAAGDRWKSL++ADKAPYVAKANKLK EYNKAIAAY
Sbjct: 61  SLREEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLTEADKAPYVAKANKLKAEYNKAIAAY 120

Query: 496 NKGESTAKKAAPAKEEEEEDEEESDKSKSE--DEDDDE 603
           NKGESTAKK APAKEEEE+DEEESDKSKSE  DEDDDE
Sbjct: 121 NKGESTAKK-APAKEEEEDDEEESDKSKSEVNDEDDDE 157


>sp|P40621|HMGL_WHEAT HMG1/2-like protein
 emb|CAA77641.1| high mobility group protein [Triticum aestivum]
 dbj|BAF30985.1| high mobility globular protein [Triticum aestivum]
          Length = 161

 Score =  251 bits (641), Expect = 4e-65
 Identities = 130/151 (86%), Positives = 139/151 (92%), Gaps = 5/151 (3%)
 Frame = +1

Query: 166 MKGAKPRGAAKADAKLAVKSKGAEKPAAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 345
           MKGAK +GAAKADAKLAVKSKGAEKPAAKG+KGKAGKDPNKPKRAPSAFFVFM EFR+EF
Sbjct: 1   MKGAKSKGAAKADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEF 60

Query: 346 KEKNPKNKSVAAVGKAAGDRWKSLSDADKAPYVAKANKLKGEYNKAIAAYNKGES---TA 516
           K+KNPKNKSVAAVGKAAG+RWKSLS+++KAPYVAKANKLKGEYNKAIAAYNKGES    A
Sbjct: 61  KQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAAA 120

Query: 517 KKAAPAKEEEEEDEEESDKSKSE--DEDDDE 603
            K A AKE EEEDEEESDKSKSE  D+DDDE
Sbjct: 121 PKKAAAKEVEEEDEEESDKSKSEINDDDDDE 151