BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst024h11
         (450 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046582.1| Os02g0288200 [Oryza sativa (japonica cultiva...    82   1e-14
ref|XP_793342.2| PREDICTED: hypothetical protein [Strongylocentr...    73   5e-12
ref|XP_001362967.1| PREDICTED: similar to serine/arginine repeti...    71   3e-11
ref|XP_001362791.1| PREDICTED: similar to serine/arginine repeti...    71   3e-11
ref|NP_001045458.1| Os01g0959000 [Oryza sativa (japonica cultiva...    70   4e-11

>ref|NP_001046582.1| Os02g0288200 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD21720.1| putative Neurofilament triplet M protein [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF08496.1| Os02g0288200 [Oryza sativa (japonica cultivar-group)]
          Length = 578

 Score = 81.6 bits (200), Expect = 1e-14
 Identities = 56/138 (40%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
 Frame = +2

Query: 65  MARKRRA-----PPPPQEEDFSEEYSSGEAEEAEGTPTPQK------PPQNPKSHSAAAA 211
           MARKRRA     PPPP  E  S   SSGE EE E     ++      PPQ P    AA++
Sbjct: 1   MARKRRAPTPPPPPPPPPEAESSADSSGEEEEEEEEEEEERESPVAPPPQKPSGRGAASS 60

Query: 212 NNADGDSSEGDDEEQDAEESSDSEVDARAFQLRQVARSPSKPPAPASKPESDASEEEGDS 391
                      DEE++ EE SD++  A+ FQLR+V              + +  E EGDS
Sbjct: 61  -----------DEEEEEEEDSDTDTYAQGFQLRKVGGG-----------DEEGEEVEGDS 98

Query: 392 SESEPDNPEPVQKKAARK 445
           SESEP+ PEPV+K++A+K
Sbjct: 99  SESEPE-PEPVKKESAKK 115


>ref|XP_793342.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 ref|XP_001183393.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 1030

 Score = 73.2 bits (178), Expect = 5e-12
 Identities = 57/152 (37%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
 Frame = +3

Query: 36   SPPPNPSGEPWPASAARRRRRRRRISPRSTAPARRRRRKAPPHHKSPPKTLNPIPPPRPT 215
            SP P     P   S  RRRR   R SPR + P RRR        +SP +     P     
Sbjct: 595  SPSPRRRTPPRRYSPPRRRRSPPRRSPRRSPPRRRRSPTPDRRRRSPERRSRRSP----- 649

Query: 216  TPTATRRRETTRSRTLRSHPT---RKLTLEPSSCARLPAPPASRRLRPPNP--NPTPVRR 380
            TP   RRR  T  R  R  PT   R+ +  P    R P+PP  RR  P     +PTP +R
Sbjct: 650  TPDRRRRRSPTPERRRRRSPTPEKRRRSPTPERRRRSPSPPERRRQSPEKRRRSPTPEKR 709

Query: 381  RATRRSPSP---------TTRSPSRRRRQGSP 449
            R   RSPSP         ++RSP RR+R  SP
Sbjct: 710  R---RSPSPRKRSADGRRSSRSPDRRKRASSP 738


>ref|XP_001362967.1| PREDICTED: similar to serine/arginine repetitive matrix 1, isoform
           3 [Monodelphis domestica]
          Length = 917

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 55/153 (35%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
 Frame = +3

Query: 36  SPPPNPSGEPW--PASAARRRRR-------RRRISPRSTAPARRRRRKAPPHHKSPPKTL 188
           S P    G+ W  P   + RRRR       RRR SP    P RRRR   PP    PP+  
Sbjct: 543 SSPRMQMGKRWQSPMIKSSRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPP--PPPPRRR 600

Query: 189 NPIPPPRPTTPTATRRRETTRSRTLRSHPTRKLTLEPSSCAR---LPAPPASRRLR---P 350
            P PPPR  +P+  R     + R   S P ++ T  P    +    P+PP  RR+    P
Sbjct: 601 TPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPP 660

Query: 351 PNPNPTPVRRRATRRSPSPTTRSPSRRRRQGSP 449
           P P  +PV +   RRSP     S S + R+GSP
Sbjct: 661 PKPRSSPVTK---RRSP-----SLSSKHRKGSP 685


>ref|XP_001362791.1| PREDICTED: similar to serine/arginine repetitive matrix 1, isoform
           1 [Monodelphis domestica]
          Length = 914

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 55/153 (35%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
 Frame = +3

Query: 36  SPPPNPSGEPW--PASAARRRRR-------RRRISPRSTAPARRRRRKAPPHHKSPPKTL 188
           S P    G+ W  P   + RRRR       RRR SP    P RRRR   PP    PP+  
Sbjct: 540 SSPRMQMGKRWQSPMIKSSRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPP--PPPPRRR 597

Query: 189 NPIPPPRPTTPTATRRRETTRSRTLRSHPTRKLTLEPSSCAR---LPAPPASRRLR---P 350
            P PPPR  +P+  R     + R   S P ++ T  P    +    P+PP  RR+    P
Sbjct: 598 TPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPP 657

Query: 351 PNPNPTPVRRRATRRSPSPTTRSPSRRRRQGSP 449
           P P  +PV +   RRSP     S S + R+GSP
Sbjct: 658 PKPRSSPVTK---RRSP-----SLSSKHRKGSP 682


>ref|NP_001045458.1| Os01g0959000 [Oryza sativa (japonica cultivar-group)]
 dbj|BAD87117.1| putative Ser/Arg-related nuclear matrix protein [Oryza sativa
           (japonica cultivar-group)]
 dbj|BAF07372.1| Os01g0959000 [Oryza sativa (japonica cultivar-group)]
          Length = 432

 Score = 70.1 bits (170), Expect = 4e-11
 Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
 Frame = +3

Query: 18  PPLPCCSPPPNPSGEPWPASAARRRRRRRRISPRSTAPARRRRRKAPPHHK--SPPKTLN 191
           PP P    P N  G P   SA +  ++RR  SPR   PA   R++ PP+ +  SP +  +
Sbjct: 198 PPPPKRDVPHNEKGAP---SAEKDVQQRREPSPRRK-PASPPRKRTPPNRRIESPRRQPD 253

Query: 192 PIPPPRPTTPTATRRRETTRSRTLRSHPTRKLTLEPSSCA--RLPAPPASRRLRPPNPNP 365
           P P  RP +P   RR + +  R   + P R+    P S    R P+PP  RR  P  P+P
Sbjct: 254 PSPRRRPDSPPIRRRADASPVRRGDTPPRRR----PGSPVRRRSPSPPPRRRRSPMRPSP 309

Query: 366 TPVRRRATRRSPSPTTRSPSRRRRQGSP 449
                R  R SPSP  RSP   RR+  P
Sbjct: 310 -----RRLRGSPSPRRRSPGPIRRRSPP 332