BLASTX 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyst023e13
         (514 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           5,815,196 sequences; 2,006,227,497 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001067021.1| Os12g0561000 [Oryza sativa (japonica cultiva...    57   1e-15
sp|Q42841|COX5C_HORVU Cytochrome c oxidase polypeptide Vc (Cytoc...    54   2e-14
sp|Q8VY39|CX5C2_HELAN Cytochrome c oxidase polypeptide Vc-2 (Cyt...    48   2e-11
emb|CAO17428.1| unnamed protein product [Vitis vinifera]               51   2e-11
sp|Q8VY40|CX5C1_HELAN Cytochrome c oxidase polypeptide Vc-1 (Cyt...    46   9e-11

>ref|NP_001067021.1| Os12g0561000 [Oryza sativa (japonica cultivar-group)]
 sp|Q9SXX7|COX5C_ORYSJ Cytochrome c oxidase polypeptide Vc (Cytochrome c oxidase subunit
           5c)
 dbj|BAA77682.1| cytochrome c oxidase subunit 5c [Oryza sativa (japonica
           cultivar-group)]
 dbj|BAF30040.1| Os12g0561000 [Oryza sativa (japonica cultivar-group)]
 gb|EAZ20870.1| hypothetical protein OsJ_035079 [Oryza sativa (japonica
           cultivar-group)]
          Length = 63

 Score = 57.4 bits (137), Expect(2) = 1e-15
 Identities = 26/38 (68%), Positives = 27/38 (71%)
 Frame = +1

Query: 100 MAGGRVAHATLKGPSVVKEICIXXXXXXXXXXXWKMHH 213
           MAGGR+AHATLKGPSVVKEICI           WKMHH
Sbjct: 1   MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHH 38



 Score = 50.4 bits (119), Expect(2) = 1e-15
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 216 NEQRKTRSFYDMLEKGQISVVVEE 287
           NEQRKTRSFYDMLEKGQISVVVEE
Sbjct: 40  NEQRKTRSFYDMLEKGQISVVVEE 63


>sp|Q42841|COX5C_HORVU Cytochrome c oxidase polypeptide Vc (Cytochrome c oxidase subunit
           5c)
 emb|CAA92107.1| cytochrome c oxidase, Vc subunit [Hordeum vulgare subsp. vulgare]
          Length = 63

 Score = 53.5 bits (127), Expect(2) = 2e-14
 Identities = 26/38 (68%), Positives = 26/38 (68%)
 Frame = +1

Query: 100 MAGGRVAHATLKGPSVVKEICIXXXXXXXXXXXWKMHH 213
           MAGGRVAHATLKGPSVVKEI I           WKMHH
Sbjct: 1   MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHH 38



 Score = 50.4 bits (119), Expect(2) = 2e-14
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +3

Query: 216 NEQRKTRSFYDMLEKGQISVVVEE 287
           NEQRKTRSFYDMLEKGQISVVVEE
Sbjct: 40  NEQRKTRSFYDMLEKGQISVVVEE 63


>sp|Q8VY39|CX5C2_HELAN Cytochrome c oxidase polypeptide Vc-2 (Cytochrome c oxidase subunit
           5c-2)
 gb|AAL67939.1| cytochrome c oxidase subunit 5c [Helianthus annuus]
          Length = 64

 Score = 47.8 bits (112), Expect(2) = 2e-11
 Identities = 22/38 (57%), Positives = 23/38 (60%)
 Frame = +1

Query: 100 MAGGRVAHATLKGPSVVKEICIXXXXXXXXXXXWKMHH 213
           M GGRVAH  LKGPSVVKE+ I           WKMHH
Sbjct: 1   MGGGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWKMHH 38



 Score = 45.8 bits (107), Expect(2) = 2e-11
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = +3

Query: 216 NEQRKTRSFYDMLEKGQISVVVEE 287
           NEQRKTR+FYD+LEKG+ISVVV+E
Sbjct: 40  NEQRKTRAFYDLLEKGEISVVVDE 63


>emb|CAO17428.1| unnamed protein product [Vitis vinifera]
          Length = 63

 Score = 51.2 bits (121), Expect(2) = 2e-11
 Identities = 24/45 (53%), Positives = 28/45 (62%)
 Frame = +1

Query: 100 MAGGRVAHATLKGPSVVKEICIXXXXXXXXXXXWKMHH*TSRGRL 234
           MA  ++AHATLKGPSVVKEICI           WKMHH   + +L
Sbjct: 1   MAAHKIAHATLKGPSVVKEICIGATLGLLAGGLWKMHHWNEQKKL 45



 Score = 42.0 bits (97), Expect(2) = 2e-11
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +3

Query: 216 NEQRKTRSFYDMLEKGQISVVVEE 287
           NEQ+K R+FYDMLEK QISVVV+E
Sbjct: 40  NEQKKLRTFYDMLEKDQISVVVDE 63


>sp|Q8VY40|CX5C1_HELAN Cytochrome c oxidase polypeptide Vc-1 (Cytochrome c oxidase subunit
           5c-1)
 gb|AAL67938.1| cytochrome c oxidase subunit 5c [Helianthus annuus]
          Length = 63

 Score = 45.8 bits (107), Expect(2) = 9e-11
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = +3

Query: 216 NEQRKTRSFYDMLEKGQISVVVEE 287
           NEQRKTR+FYD+LEKG+ISVVV+E
Sbjct: 40  NEQRKTRAFYDLLEKGEISVVVQE 63



 Score = 45.4 bits (106), Expect(2) = 9e-11
 Identities = 21/38 (55%), Positives = 22/38 (57%)
 Frame = +1

Query: 100 MAGGRVAHATLKGPSVVKEICIXXXXXXXXXXXWKMHH 213
           M GGRVAH  LKGPS VKE+ I           WKMHH
Sbjct: 1   MVGGRVAHPVLKGPSEVKELIIGSVLGLAAGGLWKMHH 38