BLASTX 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyst023e09 (733 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 5,815,196 sequences; 2,006,227,497 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAY87908.1| hypothetical protein OsI_009141 [Oryza sativa (in... 253 6e-66 ref|NP_001048426.1| Os02g0803400 [Oryza sativa (japonica cultiva... 251 2e-65 ref|NP_564400.1| vacuolar protein sorting 55 family protein / VP... 178 3e-43 gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical ... 177 4e-43 gb|AAM63461.1| unknown [Arabidopsis thaliana] 177 7e-43 >gb|EAY87908.1| hypothetical protein OsI_009141 [Oryza sativa (indica cultivar-group)] Length = 136 Score = 253 bits (647), Expect = 6e-66 Identities = 122/136 (89%), Positives = 129/136 (94%) Frame = +1 Query: 199 LSRRMRTCLHGGRLALLAILVSSGIVLQILACALYNNWWPMLTVLMYLILPMPLLFFMGS 378 ++R MRTCLH GRLALLAILVS GIVLQILACALYNNWWPMLTVLMYLILPMPL+FF+GS Sbjct: 1 MARSMRTCLHSGRLALLAILVSGGIVLQILACALYNNWWPMLTVLMYLILPMPLIFFLGS 60 Query: 379 NSPSMMSNEGDGWVNFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSFVVFGVAI 558 NSPSMMSN+GD WVNFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSF+VFGVAI Sbjct: 61 NSPSMMSNDGDTWVNFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSFLVFGVAI 120 Query: 559 LWFLQMNGEDEYSSVF 606 LW +QMN EDEYSS F Sbjct: 121 LWLIQMNSEDEYSSAF 136 >ref|NP_001048426.1| Os02g0803400 [Oryza sativa (japonica cultivar-group)] dbj|BAD36040.1| vacuolar protein sorting 55 protein-like [Oryza sativa (japonica cultivar-group)] dbj|BAF10340.1| Os02g0803400 [Oryza sativa (japonica cultivar-group)] gb|EAZ24983.1| hypothetical protein OsJ_008466 [Oryza sativa (japonica cultivar-group)] Length = 136 Score = 251 bits (642), Expect = 2e-65 Identities = 121/136 (88%), Positives = 129/136 (94%) Frame = +1 Query: 199 LSRRMRTCLHGGRLALLAILVSSGIVLQILACALYNNWWPMLTVLMYLILPMPLLFFMGS 378 ++R MRTCLH GRLALLAILVS GIVLQILACALYNNWWPMLTVLMYLILPMPL+FF+GS Sbjct: 1 MARSMRTCLHSGRLALLAILVSGGIVLQILACALYNNWWPMLTVLMYLILPMPLIFFLGS 60 Query: 379 NSPSMMSNEGDGWVNFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSFVVFGVAI 558 NSPSMMSN+GD WV+FTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSF+VFGVAI Sbjct: 61 NSPSMMSNDGDTWVSFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSFLVFGVAI 120 Query: 559 LWFLQMNGEDEYSSVF 606 LW +QMN EDEYSS F Sbjct: 121 LWLIQMNSEDEYSSAF 136 >ref|NP_564400.1| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] ref|NP_849741.1| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] ref|NP_001077643.1| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] ref|NP_001077644.1| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] ref|NP_001077645.1| vacuolar protein sorting 55 family protein / VPS55 family protein [Arabidopsis thaliana] gb|AAK32860.1|AF361848_1 At1g32410/F5D14_6 [Arabidopsis thaliana] gb|AAL47420.1| At1g32410/F5D14_6 [Arabidopsis thaliana] dbj|BAD44680.1| unknown protein [Arabidopsis thaliana] dbj|BAF02215.1| hypothetical protein [Arabidopsis thaliana] Length = 140 Score = 178 bits (452), Expect = 3e-43 Identities = 86/131 (65%), Positives = 109/131 (83%), Gaps = 1/131 (0%) Frame = +1 Query: 211 MRTCLHGGRLALLAILVSSGIVLQILACALYNNWWPMLTVLMYLILPMPLLFFMGSNSPS 390 +RTCL G++A LAILVS+GIVLQILACAL+NNWWPML+V+MY++LPMPLLFF GS+S S Sbjct: 8 LRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTS 67 Query: 391 MMSNEGDGWVNFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSFVVFGVAILWFL 570 + + + W+N KFLTGAS VGS+AIPSILKHAG+IGWGAL ++LSS+VVF VAIL ++ Sbjct: 68 LFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYI 127 Query: 571 QM-NGEDEYSS 600 + + D Y S Sbjct: 128 CIGDASDNYYS 138 >gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810 from Arabidopsis thaliana BAC F19I3 gb|AC004238. It contains a PPR repeat domain PF|01535. ESTs gb|AV539170, gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and gb|AV533492 come from this gene Length = 864 Score = 177 bits (450), Expect = 4e-43 Identities = 83/120 (69%), Positives = 104/120 (86%) Frame = +1 Query: 211 MRTCLHGGRLALLAILVSSGIVLQILACALYNNWWPMLTVLMYLILPMPLLFFMGSNSPS 390 +RTCL G++A LAILVS+GIVLQILACAL+NNWWPML+V+MY++LPMPLLFF GS+S S Sbjct: 8 LRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTS 67 Query: 391 MMSNEGDGWVNFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSFVVFGVAILWFL 570 + + + W+N KFLTGAS VGS+AIPSILKHAG+IGWGAL ++LSS+VVF VAIL ++ Sbjct: 68 LFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAILGYI 127 >gb|AAM63461.1| unknown [Arabidopsis thaliana] Length = 140 Score = 177 bits (448), Expect = 7e-43 Identities = 83/127 (65%), Positives = 106/127 (83%) Frame = +1 Query: 211 MRTCLHGGRLALLAILVSSGIVLQILACALYNNWWPMLTVLMYLILPMPLLFFMGSNSPS 390 +RTCL G++A LAILVS+GIVLQILACAL+NNWWPML+V+MY++LPMPLLFF GS+S S Sbjct: 8 LRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTS 67 Query: 391 MMSNEGDGWVNFTKFLTGASIVGSIAIPSILKHAGVIGWGALTMELSSFVVFGVAILWFL 570 + + + W+N KFLTGAS VGS+AIPSILKHAG+IGWGAL ++LSS++VF VAIL ++ Sbjct: 68 LFNESDNSWINAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYLVFLVAILGYI 127 Query: 571 QMNGEDE 591 + E Sbjct: 128 CIGDASE 134